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Sed0027924 (gene) of Chayote v1 genome

Gene IDSed0027924
OrganismSechium edule (Chayote v1)
DescriptionWinged helix-turn-helix DNA-binding domain containing protein
Genome locationLG13:10926482..10927333
RNA-Seq ExpressionSed0027924
SyntenySed0027924
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022929341.1 uncharacterized protein LOC111435944 [Cucurbita moschata]1.0e-2089.83Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MGGRGVIGDKWSMRVLW+CALGSA+GLYMVAQERQLQNR RMLAESLKD+ES G GENV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

XP_022943152.1 uncharacterized protein LOC111447969 [Cucurbita moschata]1.4e-2089.83Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MGGRGVIGDKWSMRVLW+CALGSAIGLYMV+QERQLQNR RMLAESLKD+ES G GENV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

XP_022985081.1 uncharacterized protein LOC111483159 [Cucurbita maxima]3.0e-2088.14Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MGGRGVIGDKWSMRVLW+CALGSA+G YMVAQERQLQNR RMLAESLKD+ES G GENV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

XP_023540165.1 uncharacterized protein LOC111800616 [Cucurbita pepo subsp. pepo]3.0e-2089.83Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MGGRGVIGDKWSMRVLW+CALGSAIGLYMVAQERQLQNR+RMLAESLKD+ES G GE+V
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

XP_038903238.1 uncharacterized protein LOC120089884 [Benincasa hispida]6.1e-2191.53Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MGGRGVIGDKWSMRVLW+CALGSAIGLYMVAQERQLQNR+RMLAESLKD ES G GENV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

TrEMBL top hitse value%identityAlignment
A0A0A0L386 Uncharacterized protein2.1e-1983.33Show/hide
Query:  DMGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        DMGGRGVIGDKWS RVLW+CALGS IG+YMVAQERQLQNR+RML ESLKD+ES G  ENV
Subjt:  DMGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

A0A6J1CPB9 uncharacterized protein LOC1110128741.9e-2088.14Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MGGRGVIGDKWSMRVLW+CA+GSAIGLYMVAQERQLQNR+RMLAESL D+ES G GENV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

A0A6J1EMV3 uncharacterized protein LOC1114359445.0e-2189.83Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MGGRGVIGDKWSMRVLW+CALGSA+GLYMVAQERQLQNR RMLAESLKD+ES G GENV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

A0A6J1FS83 uncharacterized protein LOC1114479696.5e-2189.83Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MGGRGVIGDKWSMRVLW+CALGSAIGLYMV+QERQLQNR RMLAESLKD+ES G GENV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

A0A6J1J744 uncharacterized protein LOC1114831591.5e-2088.14Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MGGRGVIGDKWSMRVLW+CALGSA+G YMVAQERQLQNR RMLAESLKD+ES G GENV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15395.1 unknown protein2.3e-1871.19Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MG RG+I DKWSMR+LW CA+GSAIGLYMVA ERQ QNR R +AESL+  ES+G G+NV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

AT3G15395.2 unknown protein2.3e-1871.19Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MG RG+I DKWSMR+LW CA+GSAIGLYMVA ERQ QNR R +AESL+  ES+G G+NV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

AT3G15395.3 unknown protein2.3e-1871.19Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MG RG+I DKWSMR+LW CA+GSAIGLYMVA ERQ QNR R +AESL+  ES+G G+NV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV

AT3G15395.4 unknown protein2.3e-1871.19Show/hide
Query:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV
        MG RG+I DKWSMR+LW CA+GSAIGLYMVA ERQ QNR R +AESL+  ES+G G+NV
Subjt:  MGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACCAGCTGCTTTGTTCTATAGGGAGCCATATGCTTTCTCTGAAAATGACATTCTTAACCAGACTGGATCAGTTGCTATAGTTTCAACCTCCCATATCCATATAGA
TATGGGAGGTAGAGGTGTTATTGGTGATAAATGGTCCATGAGGGTTCTCTGGATCTGTGCCTTAGGGAGTGCAATTGGTTTGTATATGGTTGCTCAAGAGAGACAATTAC
AGAACAGGGAAAGAATGCTGGCTGAAAGCCTGAAAGATATGGAATCAGAAGGTGGTGGTGAGAATGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTACCAGCTGCTTTGTTCTATAGGGAGCCATATGCTTTCTCTGAAAATGACATTCTTAACCAGACTGGATCAGTTGCTATAGTTTCAACCTCCCATATCCATATAGA
TATGGGAGGTAGAGGTGTTATTGGTGATAAATGGTCCATGAGGGTTCTCTGGATCTGTGCCTTAGGGAGTGCAATTGGTTTGTATATGGTTGCTCAAGAGAGACAATTAC
AGAACAGGGAAAGAATGCTGGCTGAAAGCCTGAAAGATATGGAATCAGAAGGTGGTGGTGAGAATGTTTAG
Protein sequenceShow/hide protein sequence
MLPAALFYREPYAFSENDILNQTGSVAIVSTSHIHIDMGGRGVIGDKWSMRVLWICALGSAIGLYMVAQERQLQNRERMLAESLKDMESEGGGENV