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Sed0027933 (gene) of Chayote v1 genome

Gene IDSed0027933
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:22958315..22958545
RNA-Seq ExpressionSed0027933
SyntenySed0027933
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649873.1 hypothetical protein Csa_012848, partial [Cucumis sativus]1.5e-0656.94Show/hide
Query:  TLLVSGKNQVTMGFVG---IDPHPPSRML---NHQMQLL--PPPSSSWRDSFHALFASKRKVPNTSDPLHNR
        TLLVSG N+ TMG      ID HP S M       +QLL  PPP S     F+ALFASKRKVPNT DP+HNR
Subjt:  TLLVSGKNQVTMGFVG---IDPHPPSRML---NHQMQLL--PPPSSSWRDSFHALFASKRKVPNTSDPLHNR

KDP41663.1 hypothetical protein JCGZ_16070 [Jatropha curcas]9.7e-0643.84Show/hide
Query:  RLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR
        ++++L+++++LLVSG+ + TM     D   P R   HQ           R SF  LF+SKRKVPN SDPLHNR
Subjt:  RLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR

OAY22995.1 hypothetical protein MANES_18G043100v8 [Manihot esculenta]1.1e-0443.42Show/hide
Query:  MKARLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR
        M  +L+++++V  L+VSG+ + T+ F   D   P R    Q Q L       R SF   F+SKRKVPN SDPLHNR
Subjt:  MKARLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR

OMO70596.1 hypothetical protein COLO4_28570 [Corchorus olitorius]7.0e-0440.79Show/hide
Query:  KARLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQM-QLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR
        K  +++L+++F LLVSG       F  ++ H      N  + Q    P    R SF A F+SKR+VPN SDPLHNR
Subjt:  KARLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQM-QLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR

OMO78847.1 hypothetical protein CCACVL1_14077 [Corchorus capsularis]1.1e-0444Show/hide
Query:  LVLLMVVFTLLVSG---KNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR
        +++L++VF LLVSG   KN+ +M F  ++ H      N  +   P P    R SF   F+SKR+VPN SDPLHNR
Subjt:  LVLLMVVFTLLVSG---KNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR

TrEMBL top hitse value%identityAlignment
A0A067L375 Uncharacterized protein4.7e-0643.84Show/hide
Query:  RLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR
        ++++L+++++LLVSG+ + TM     D   P R   HQ           R SF  LF+SKRKVPN SDPLHNR
Subjt:  RLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR

A0A0A0KZW1 Uncharacterized protein3.1e-1058.33Show/hide
Query:  MKARLVLLMVVFTLLVSGKNQVTMGFVG---IDPHPPSRML---NHQMQLL--PPPSSSWRDSFHALFASKRKVPNTSDPLHNR
        M+ARL+LLM V TLLVSG N+ TMG      ID HP S M       +QLL  PPP S     F+ALFASKRKVPNT DP+HNR
Subjt:  MKARLVLLMVVFTLLVSGKNQVTMGFVG---IDPHPPSRML---NHQMQLL--PPPSSSWRDSFHALFASKRKVPNTSDPLHNR

A0A1R3HJP1 Uncharacterized protein3.4e-0440.79Show/hide
Query:  KARLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQM-QLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR
        K  +++L+++F LLVSG       F  ++ H      N  + Q    P    R SF A F+SKR+VPN SDPLHNR
Subjt:  KARLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQM-QLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR

A0A1R3I8C4 Uncharacterized protein5.2e-0544Show/hide
Query:  LVLLMVVFTLLVSG---KNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR
        +++L++VF LLVSG   KN+ +M F  ++ H      N  +   P P    R SF   F+SKR+VPN SDPLHNR
Subjt:  LVLLMVVFTLLVSG---KNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR

A0A2C9U059 Uncharacterized protein5.2e-0543.42Show/hide
Query:  MKARLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR
        M  +L+++++V  L+VSG+ + T+ F   D   P R    Q Q L       R SF   F+SKRKVPN SDPLHNR
Subjt:  MKARLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTCGGCTGGTTTTGTTAATGGTTGTTTTCACTCTTCTTGTCTCTGGAAAAAACCAAGTGACAATGGGGTTTGTCGGCATCGATCCACATCCACCGTCAAGAAT
GCTGAACCACCAAATGCAGCTGTTGCCACCGCCATCATCGTCATGGAGGGACTCATTCCATGCTCTCTTTGCAAGCAAGAGGAAGGTCCCGAACACTTCAGATCCACTTC
ATAATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTCGGCTGGTTTTGTTAATGGTTGTTTTCACTCTTCTTGTCTCTGGAAAAAACCAAGTGACAATGGGGTTTGTCGGCATCGATCCACATCCACCGTCAAGAAT
GCTGAACCACCAAATGCAGCTGTTGCCACCGCCATCATCGTCATGGAGGGACTCATTCCATGCTCTCTTTGCAAGCAAGAGGAAGGTCCCGAACACTTCAGATCCACTTC
ATAATCGTTGA
Protein sequenceShow/hide protein sequence
MKARLVLLMVVFTLLVSGKNQVTMGFVGIDPHPPSRMLNHQMQLLPPPSSSWRDSFHALFASKRKVPNTSDPLHNR