CuGenDBv2

Gene ID	Sed0027984
Organism	Sechium edule (Chayote v1)
Description	rRNA-processing protein EFG1
Genome location	LG02:49939375..49944419
RNA-Seq Expression	Sed0027984
Synteny	Sed0027984
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component) GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domains	IPR019310 - rRNA-processing protein Efg1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022946509.1 rRNA-processing protein EFG1 isoform X2 [Cucurbita moschata]

4.8e-143

90.42

Show/hide

Query:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKKLEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+R
Subjt:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
        RLEKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG

Query:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH-QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRAR
        SSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NH QISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+AR
Subjt:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH-QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRAR

Query:  GSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        GSSNSHT HSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  GSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

XP_022946524.1 rRNA-processing protein EFG1 isoform X4 [Cucurbita moschata]

2.0e-144

90.69

Show/hide

Query:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKKLEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+R
Subjt:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
        RLEKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG

Query:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG
        SSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NHQISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+ARG
Subjt:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG

Query:  SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        SSNSHT HSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

XP_022974419.1 rRNA-processing protein EFG1 isoform X4 [Cucurbita maxima]

4.8e-143

90.09

Show/hide

Query:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKKLEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+R
Subjt:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
        RLEKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG

Query:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG
        SSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NHQISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+ RG
Subjt:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG

Query:  SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        SSNS T HSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

XP_038877104.1 rRNA-processing protein efg1-like isoform X1 [Benincasa hispida]

2.2e-143

90.45

Show/hide

Query:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        MAHGGYG RRVNPP RRSK LAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+REAQEKKLEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+R
Subjt:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
        RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGD+SDMVD+RNKLR+QIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFF+ G
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG

Query:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH--QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRA
        SSSDEADADDE TDKS+REQASS SGKAASGMSSDE+NH  QISAR LMPPPRPTKSFSSSAQARSK GSSLRK STNHRAE STS+N S SRSGSSF+ 
Subjt:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH--QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRA

Query:  RGSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        RGSSNSHT  SSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  RGSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

XP_038877105.1 rRNA-processing protein efg1-like isoform X2 [Benincasa hispida]

6.7e-145

90.99

Show/hide

Query:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        MAHGGYG RRVNPP RRSK LAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+REAQEKKLEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+R
Subjt:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
        RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGD+SDMVD+RNKLR+QIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFF+ G
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG

Query:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG
        SSSDEADADDE TDKS+REQASS SGKAASGMSSDE+NHQISAR LMPPPRPTKSFSSSAQARSK GSSLRK STNHRAE STS+N S SRSGSSF+ RG
Subjt:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG

Query:  SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        SSNSHT  SSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1G412 rRNA-processing protein EFG1

2.3e-143

90.42

Show/hide

Query:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKKLEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+R
Subjt:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
        RLEKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG

Query:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH-QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRAR
        SSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NH QISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+AR
Subjt:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH-QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRAR

Query:  GSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        GSSNSHT HSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  GSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

A0A6J1G415 rRNA-processing protein EFG1

4.0e-143

89.88

Show/hide

Query:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKKLEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+R
Subjt:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
        RLEKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG

Query:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH---QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFR
        SSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NH   QISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+
Subjt:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH---QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFR

Query:  ARGSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        ARGSSNSHT HSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  ARGSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

A0A6J1G428 rRNA-processing protein EFG1

9.5e-145

90.69

Show/hide

Query:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKKLEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+R
Subjt:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
        RLEKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG

Query:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG
        SSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NHQISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+ARG
Subjt:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG

Query:  SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        SSNSHT HSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

A0A6J1IA73 rRNA-processing protein EFG1

5.8e-142

89.82

Show/hide

Query:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKKLEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+R
Subjt:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
        RLEKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG

Query:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH-QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRAR
        SSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NH QISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+ R
Subjt:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH-QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRAR

Query:  GSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        GSSNS T HSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  GSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

A0A6J1IHJ8 rRNA-processing protein EFG1

2.3e-143

90.09

Show/hide

Query:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKKLEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+R
Subjt:  MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
        RLEKLQRAPSGQ QDSD+ADQLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSG

Query:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG
        SSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NHQISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+ RG
Subjt:  SSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG

Query:  SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        SSNS T HSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

SwissProt top hits

e value

%identity

Alignment

A3LNR4 rRNA-processing protein EFG1

2.0e-06

27.65

Show/hide

Query:  PPRRSKALAVDKKKPKSVS-------------LKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR
        PP+ +K     K++P   S             LK +IR  ER+L +  LPA++R   E+ ++ LK + +        +++  +   ++FFE++K  R+L+
Subjt:  PPRRSKALAVDKKKPKSVS-------------LKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLR

Query:  RLEKLQRAPSGQLQDSDVADQLSKLKE-------DLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQ
        +  K        +  +DV   + K ++       DL YV  FPK+EKY++L+    E+D VD  N   K+
Subjt:  RLEKLQRAPSGQLQDSDVADQLSKLKE-------DLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQ

A8N5J5 rRNA-processing protein EFG1

2.8e-08

28.57

Show/hide

Query:  PPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQL
        P  + KA A+    P    +K+ +R   R+L ++NL A+ R   E++L+ L+ + +   +   ER + +R  K+KFFER+K+ R+L ++++   +  G  
Subjt:  PPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQL

Query:  QDSDVADQLSKLKEDLEYVRFFPKTEKYVALF---------TGGDESDMVDKRNKLRKQIK
        +   +  QL + + +L Y+  +PKT+KY++LF         T   ++D  +K N+ R++I+
Subjt:  QDSDVADQLSKLKEDLEYVRFFPKTEKYVALF---------TGGDESDMVDKRNKLRKQIK

P0CN34 rRNA-processing protein EFG1

2.6e-06

32.77

Show/hide

Query:  PKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLE-KLQRAPSGQLQDSDVADQLSKLK
        P    LK+ IR  +R+L ++NL   +R + +++L  L+       R  VERK   +  K+KFFER+K+ R ++R + KL  + +   + S   ++L   +
Subjt:  PKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLE-KLQRAPSGQLQDSDVADQLSKLK

Query:  EDLEYVRFFPKTEKYVALF
          L YV  +P T+KY++LF
Subjt:  EDLEYVRFFPKTEKYVALF

P0CN35 rRNA-processing protein EFG1

2.6e-06

32.77

Show/hide

Query:  PKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLE-KLQRAPSGQLQDSDVADQLSKLK
        P    LK+ IR  +R+L ++NL   +R + +++L  L+       R  VERK   +  K+KFFER+K+ R ++R + KL  + +   + S   ++L   +
Subjt:  PKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLE-KLQRAPSGQLQDSDVADQLSKLK

Query:  EDLEYVRFFPKTEKYVALF
          L YV  +P T+KY++LF
Subjt:  EDLEYVRFFPKTEKYVALF

Q09867 rRNA-processing protein efg1

9.2e-12

36.03

Show/hide

Query:  KKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEK-LQRAPSGQLQDSDVADQLSK
        K P    LK +IR  ER+L ++NLPA IR   E+ L GL++Q  +      ++KIF R +K++FFER+K ERR+++LEK L+       +       + K
Subjt:  KKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEK-LQRAPSGQLQDSDVADQLSK

Query:  LKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKL
         + DL Y++ +P   KYV+L+  G      + RN++
Subjt:  LKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKL

Arabidopsis top hits

e value

%identity

Alignment

AT1G04230.1 Protein of unknown function (DUF2361)

3.5e-91

63.34

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Query:  MAHGGYGNRRVNP------PPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRK
        MAHGGY  RRV          RRSK L V+ KKPK+ SLKNQIRS  RM +RK+LP E+REA EKKL+ LKKQQ+IH RLA ERKIFLR+RK++FFERRK
Subjt:  MAHGGYGNRRVNP------PPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRK

Query:  IERRLRRLEKLQRAPS-GQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSE
        IER +RRLEKL R+ S G +QD+++  QL++LKEDLEYVRFFPK EKYV+LF+G D+  + ++R+KLRKQIKAN+I AAASGK+LEETGSEDD LLD+S+
Subjt:  IERRLRRLEKLQRAPS-GQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSE

Query:  DDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQ-ISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRS
        DDFFV+GSSSDEADADDE TDKS++E  SSASG+A S MSSDE+N +  S R LMPPP            RS+  S+ R++S+  R E  +S+N S  RS
Subjt:  DDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQ-ISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRS

Query:  GSSFRARGSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
         SS  A   ++SHTS SSN+SSNSDAHKP+RKRRPKKKK Q
Subjt:  GSSFRARGSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

AT5G43720.1 Protein of unknown function (DUF2361)

9.5e-97

64.81

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Query:  MAHGGYGNRRVNPP------PRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRK
        MAHGGY  RR + P       RRSK L V+ KKPK+VS+KNQ+RS ER  LRK+LP E+RE+  +KLE LKKQQ+ H+RLAVERKIF R+RKIKFFERRK
Subjt:  MAHGGYGNRRVNPP------PRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRK

Query:  IERRLRRLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSED
        IER +RRLEKLQR  S  + D D+A+QLSKLKEDLEYVRFFPK EKYV+LFTG ++S++++KR K+R+QIKAN+I AAASGK+LEETGSEDDGLLD+S+D
Subjt:  IERRLRRLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSED

Query:  DFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH-QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSG
        DFF  GSSSDEADADDE TDKS++E ASSASG+A SGMSSDE+N  Q S RALMPPP          QAR +  S    +   +    S+ NN S+ RS 
Subjt:  DFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH-QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSG

Query:  SSFRARGS-SNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ
        SS+ AR S +NS++S SSN+SSNSDAHKP+RKRRPKKKK Q
Subjt:  SSFRARGS-SNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ

Sequences

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CDS sequence

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ATGGCCCACGGCGGCTACGGCAACCGCAGGGTGAACCCGCCGCCGCGCCGATCCAAGGCCTTGGCGGTCGACAAGAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAGAT
TCGATCCGCTGAGCGCATGCTTCTTCGCAAGAATTTACCTGCTGAAATTAGGGAGGCTCAAGAAAAGAAGTTGGAAGGACTCAAAAAACAGCAAGAAATTCATTCTCGTC
TGGCCGTAGAGCGCAAAATATTCTTGCGGGACAGGAAGATTAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGACTTAGACGGCTTGAAAAACTGCAACGTGCACCATCT
GGCCAGTTGCAAGATTCAGATGTTGCAGATCAATTATCCAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGG
AGGCGATGAATCAGACATGGTTGATAAGAGAAATAAGTTGCGCAAGCAGATTAAAGCCAATCTGATAGCTGCTGCAGCCAGTGGGAAGGATTTAGAAGAGACCGGTAGTG
AGGATGACGGGTTACTAGACATGAGTGAGGATGATTTCTTCGTATCTGGTAGCTCAAGTGATGAAGCAGATGCAGATGATGAATGTACAGATAAAAGTTCAAGGGAACAG
GCTTCCAGTGCTTCTGGCAAAGCTGCATCAGGCATGTCTAGTGATGAAAAAAATCATCAGATCTCTGCCAGAGCCTTAATGCCACCTCCTCGTCCAACCAAATCGTTTTC
AAGTTCAGCTCAAGCTCGGTCAAAACCAGGATCTTCCTTGAGAAAATTTTCAACAAATCACAGGGCTGAGGGTTCTACATCCAACAACAGATCAAGTAGCAGAAGTGGAT
CTTCTTTTAGAGCTAGGGGGTCCTCAAACTCGCATACAAGTCACAGCAGTAACATAAGTTCCAATTCTGATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAAAAGAAA
AAGCCACAGTTTTCACATCATCGACAAATGGATGATCATCGGCCAAATATGCAACTCACATGGACTCTAGTTTTTGTATCATCAAACAATAGGGGGAAGGTAATAAACTC
TACTTAA

mRNA sequence

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AAAAAGAAAAGAGCATTTTTATTTATTTCACTTCATCAAAGAAATAAATAAATAAAAATTGCCAAAAAAAAAAAGAAAAGTAATTTTGAAAATGAAGAAGAATTAGGTTT
TTTGTGAAGGAAAGAAATTAAGAAGATCGTGTGGAAAATTAAAAAAAGAAAAAGAAAACAAAAATGTTGGGAGACCGAAACAAAACCTCTCTGGTGTGGTGAATTTGGCG
GTGTGGTGCTGAGAGTGTGTAAAGAACCTTGTCCCTTCTCTCCGATCTGCGTGGCTACGGCAGGGAAACCATGGCCCACGGCGGCTACGGCAACCGCAGGGTGAACCCGC
CGCCGCGCCGATCCAAGGCCTTGGCGGTCGACAAGAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAGATTCGATCCGCTGAGCGCATGCTTCTTCGCAAGAATTTACCT
GCTGAAATTAGGGAGGCTCAAGAAAAGAAGTTGGAAGGACTCAAAAAACAGCAAGAAATTCATTCTCGTCTGGCCGTAGAGCGCAAAATATTCTTGCGGGACAGGAAGAT
TAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGACTTAGACGGCTTGAAAAACTGCAACGTGCACCATCTGGCCAGTTGCAAGATTCAGATGTTGCAGATCAATTATCCA
AGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGGAGGCGATGAATCAGACATGGTTGATAAGAGAAATAAGTTG
CGCAAGCAGATTAAAGCCAATCTGATAGCTGCTGCAGCCAGTGGGAAGGATTTAGAAGAGACCGGTAGTGAGGATGACGGGTTACTAGACATGAGTGAGGATGATTTCTT
CGTATCTGGTAGCTCAAGTGATGAAGCAGATGCAGATGATGAATGTACAGATAAAAGTTCAAGGGAACAGGCTTCCAGTGCTTCTGGCAAAGCTGCATCAGGCATGTCTA
GTGATGAAAAAAATCATCAGATCTCTGCCAGAGCCTTAATGCCACCTCCTCGTCCAACCAAATCGTTTTCAAGTTCAGCTCAAGCTCGGTCAAAACCAGGATCTTCCTTG
AGAAAATTTTCAACAAATCACAGGGCTGAGGGTTCTACATCCAACAACAGATCAAGTAGCAGAAGTGGATCTTCTTTTAGAGCTAGGGGGTCCTCAAACTCGCATACAAG
TCACAGCAGTAACATAAGTTCCAATTCTGATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAAAAGAAAAAGCCACAGTTTTCACATCATCGACAAATGGATGATCATC
GGCCAAATATGCAACTCACATGGACTCTAGTTTTTGTATCATCAAACAATAGGGGGAAGGTAATAAACTCTACTTAAAATGTTTAATTCAAGCGATTTTAAGTTTGTATA
CTTGTGTATTTTTGAAACATGGGTAACCACGTCCGTCCCTAGGCCAGGCACCGGAGACATCGAAGGAGTAATATCATAGGTGAGTCTCAAACCTGGGACTTTGAGGAAGC
ATACCCTCAAAGCCTAAGGCTTCAACCTCTGTGCCAACCCTTGGGGACAGTTTGTATACTTGTGTTAGGATACCACCAATAAGAATTATGAACTTGGAATCAGATATCCT
AACTTAATACCTAAAACTTTGATCTTTTATTAACCTATTAATACTAATGTACCTTTTAACTAACCACTATGCGATCACCAACTGGCCTTACCAAGGTCAAGGAGGGTCTT
GGAAATCTAAGAGGTTATGGATTCAATCGATAGTGACCGCATATCTAGGGAACAATTTTGTATGGGTTTCCATGACATCTATAGTAGGTTCATCGTGAGAATAGTTAGTC
ATGATACTCGTAAGCTGGTTTGGACATTCACACATACGTATATATTCCCTTCAACTACTACCTTACAACTTGAGTTAATGAATGCGGGACAACGAGTAATTGCATGCTTC
TTGGTCTCAATTCCATTCTCAGTTTTCTTTTGGCTTTTAAGCCCTCTCGTACACATAAATGATTGATTTCCGTTGTGATTGTTGGGGAAGTAATTTCTACTTGTTGGCCA
AACCCCCTTTTTCAGGCATGATAGATTGGCCTCGGCTCCCTGTAACCTTCACTTCAACTGCACAGCTTGAAGCCTGAACCTGACTCGTAAAGCGGTTTCTGAAATTTTTA
GCCAACCATGACTGTATGTATTCTGCTCTCGACCATTTTGGAGGTTTGCTGCATTGTATACTACTAGGTGGGTTTGAGAAATCATTTGCTTTAGTTCTGAAATGGATATG
TGGTCTTTTATTATGGTTTTTGTTTTCTTTCATCATCAGGTTTTGGGTTATTTCTTTCTTTTCTATACTGTTGAAACTTGTAATGTGACTTGAATCTTATAGCCTATCAT
GCTTCTGGCTTGGCCTTTGTCAAAAATTATTATTATTTGTTCTCCATGCGATGGCAATTCGGAAATGCTGTATTTGCTTTCTTCCTATGATCCCAACGGCTGAGTCGATA
ATCTTCTTTAATAACTCTTAACTCTTCACAGAC

Protein sequence

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MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPS
GQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQ
ASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARGSSNSHTSHSSNISSNSDAHKPRRKRRPKKK
KPQFSHHRQMDDHRPNMQLTWTLVFVSSNNRGKVINST

Sed0027984 (gene) of Chayote v1 genome