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Sed0027993 (gene) of Chayote v1 genome

Gene IDSed0027993
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:13036464..13037242
RNA-Seq ExpressionSed0027993
SyntenySed0027993
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572977.1 NF-X1-type zinc finger protein NFXL1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2379.49Show/hide
Query:  MESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRP-PAAFRDVNRPISRSPLGISGRPIS
        ME WK +NR NRE     EKIG  FPVHSQVRKIKEESET+IDW PGQPEIRP  AAFRD+NRPISRSPLGISGRPIS
Subjt:  MESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRP-PAAFRDVNRPISRSPLGISGRPIS

KAG6584306.1 DEAD-box ATP-dependent RNA helicase 27, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2571.91Show/hide
Query:  ILQIIRLEMESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIR-PPAAFRDVNRPISRSPLGISGRPISVGE
        IL++  LEME+WKQ+ R         EKIG PFPVHSQVRKIKEESE +IDWRPGQPEI+ PPAAFR++NR ISRSPLG+SGRPISVGE
Subjt:  ILQIIRLEMESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIR-PPAAFRDVNRPISRSPLGISGRPISVGE

KAG7012158.1 hypothetical protein SDJN02_24910, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2579.01Show/hide
Query:  MESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRP-PAAFRDVNRPISRSPLGISGRPISVGE
        ME WK +NR NRE     EKIG  FPVHSQVRKIKEESET+IDW PGQPEIRP  AAFRD+NRPISRSPLGISGRPISVG+
Subjt:  MESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRP-PAAFRDVNRPISRSPLGISGRPISVGE

KGN64190.1 hypothetical protein Csa_013611, partial [Cucumis sativus]3.5e-1878.79Show/hide
Query:  TTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISGRPISVGE
        T + EKI APFPVHSQVRKIKEES+T IDWRPGQPEIRPP A     R ISRSPLGISGRPISVG+
Subjt:  TTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISGRPISVGE

TYJ99047.1 hypothetical protein E5676_scaffold248G002510 [Cucumis melo var. makuwa]1.2e-1881.54Show/hide
Query:  TTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPP-AAFRDVNRPISRSPLGISGRPISVGE
        +TEKI  PFPVHSQVRKIKEESET++DWRPGQPEIRPP AAFR     ISRSPLGISGRPISVG+
Subjt:  TTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPP-AAFRDVNRPISRSPLGISGRPISVGE

TrEMBL top hitse value%identityAlignment
A0A0A0LQJ2 Uncharacterized protein1.7e-1878.79Show/hide
Query:  TTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISGRPISVGE
        T + EKI APFPVHSQVRKIKEES+T IDWRPGQPEIRPP A     R ISRSPLGISGRPISVG+
Subjt:  TTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISGRPISVGE

A0A151R370 Uncharacterized protein1.6e-1367.8Show/hide
Query:  GAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISGRPISVGE
        G   P+HSQVRKIK+ESE +IDW PG+PE+RP       +RPISRSPLGISG+PISVGE
Subjt:  GAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISGRPISVGE

A0A498I238 Uncharacterized protein4.7e-1357.5Show/hide
Query:  MESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISGRPISVGE
        ME+   +N R  E     E++G  FPVHSQVRKIK+ES+  IDW PG+PE+R P  F+++ R ISRSPLGIS RPISVG+
Subjt:  MESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISGRPISVGE

A0A540KEP9 Uncharacterized protein4.7e-1357.5Show/hide
Query:  MESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISGRPISVGE
        ME+   +N R  E     E++G  FPVHSQVRKIK+ES+  IDW PG+PE+R P  F+++ R ISRSPLGIS RPISVG+
Subjt:  MESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISGRPISVGE

A0A5D3BIV4 Uncharacterized protein5.8e-1981.54Show/hide
Query:  TTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPP-AAFRDVNRPISRSPLGISGRPISVGE
        +TEKI  PFPVHSQVRKIKEESET++DWRPGQPEIRPP AAFR     ISRSPLGISGRPISVG+
Subjt:  TTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPP-AAFRDVNRPISRSPLGISGRPISVGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCCTGCTTCAAATTCTGATTGCGGTTTTCAACTCTGTTGAATCTCTGTTATATAAGAACTCGCCCGCCTCACAGATCCTCATATTACAGATTATTCGTTTGGA
GATGGAGAGTTGGAAGCAGAGCAATCGCCGGAACAGAGAGACGACGACGACGACGGAGAAGATCGGAGCTCCGTTTCCGGTGCACAGCCAGGTGAGGAAGATCAAGGAGG
AATCGGAGACGGTCATCGATTGGCGACCGGGTCAGCCGGAGATCAGACCGCCGGCCGCCTTCCGGGACGTGAACCGCCCGATCTCTCGCTCGCCGCTAGGAATCTCCGGC
CGCCCGATTTCGGTGGGGGAATTGTAG
mRNA sequenceShow/hide mRNA sequence
GAATTATCCAGTGCGACGCGTCACAGGGAACGAAACAAGCCGGATGGTTCTGGTTGGTTTCGATTCCAGAAGGGTCAAAATCAATGGCCTGCCTGCTTCAAATTCTGATT
GCGGTTTTCAACTCTGTTGAATCTCTGTTATATAAGAACTCGCCCGCCTCACAGATCCTCATATTACAGATTATTCGTTTGGAGATGGAGAGTTGGAAGCAGAGCAATCG
CCGGAACAGAGAGACGACGACGACGACGGAGAAGATCGGAGCTCCGTTTCCGGTGCACAGCCAGGTGAGGAAGATCAAGGAGGAATCGGAGACGGTCATCGATTGGCGAC
CGGGTCAGCCGGAGATCAGACCGCCGGCCGCCTTCCGGGACGTGAACCGCCCGATCTCTCGCTCGCCGCTAGGAATCTCCGGCCGCCCGATTTCGGTGGGGGAATTGTAG
ACGGAGATTTTTTCTTCTTCGGAGGTTGTTTTCGGTTGTTCTCCGTTTTCGTTTCTGATACTACAGATTTCAGTAGCCCTACCCTAGTTTTCCTTTTCTTTCTTTGTAAA
TATTTTGTTTTGTTTAATACATACTTTTTTTTTTTTTTTTGTATATTAATTTTGTTTTTTTTTTTTTAAATCTCTTGAAAATATGACTTTGAGGACCGCCGAGCTAGGAG
AAATATTTACATCATGATCCGGCATGATGTATAGAATAATGTCAAATTATGTGGCTTAATATGTGCCACAATCTATTTTTGTTTATTTTATTTCTTTTATATCATGAATT
TAAAATCAA
Protein sequenceShow/hide protein sequence
MACLLQILIAVFNSVESLLYKNSPASQILILQIIRLEMESWKQSNRRNRETTTTTEKIGAPFPVHSQVRKIKEESETVIDWRPGQPEIRPPAAFRDVNRPISRSPLGISG
RPISVGEL