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Sed0028030 (gene) of Chayote v1 genome

Gene IDSed0028030
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:20428973..20431105
RNA-Seq ExpressionSed0028030
SyntenySed0028030
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580427.1 hypothetical protein SDJN03_20429, partial [Cucurbita argyrosperma subsp. sororia]4.8e-6790.58Show/hide
Query:  KLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDDN
        KL LDAGNGECVLY SP+VSGE+L LHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQ AGGIPYQELEMALPES+SA NVETA+GWDQGWDD+
Subjt:  KLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDDN

Query:  WDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV
        WDE+NAVKSPGG HIGSISANGLTAR NKDGWENDWDV
Subjt:  WDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV

KAG6596304.1 hypothetical protein SDJN03_09484, partial [Cucurbita argyrosperma subsp. sororia]3.6e-6790.65Show/hide
Query:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD
        MKL LDAGNGECVLYTSP+VSGEDL LHLPSFDQL TPVNGAYFLILAVLIFGGSWAC K RRRQ AGGIPYQELEMALPES+SA  VETAEGWDQGWDD
Subjt:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD

Query:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV
        +WDE+NAVKSPGG HIGSISANGLTARPNKDGWENDWDV
Subjt:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV

KAG7017185.1 hypothetical protein SDJN02_19047 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6790.65Show/hide
Query:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD
        MKL LDAGNGECVLY SP+VSGE+L LHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQ AGGIPYQELEMALPES+SA NVETA+GWDQGWDD
Subjt:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD

Query:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV
        +WDE+NAVKSPGG HIGSISANGLTAR NKDGWENDWDV
Subjt:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV

XP_022941631.1 uncharacterized protein LOC111446930 [Cucurbita moschata]3.6e-6790.65Show/hide
Query:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD
        MKL LDAGNGECVLYTSP+VSGEDL LHLPSFDQL TPVNGAYFLILAVLIFGGSWAC K RRRQ AGGIPYQELEMALPES+SA  VETAEGWDQGWDD
Subjt:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD

Query:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV
        +WDE+NAVKSPGG HIGSISANGLTARPNKDGWENDWDV
Subjt:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV

XP_023528429.1 uncharacterized protein LOC111791362 [Cucurbita pepo subsp. pepo]4.8e-6789.21Show/hide
Query:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD
        MKL LDAGNGECVLY SP+VSGE+L LHLPSFDQLATPVNGAYFL LAVLIFGGSWACCKFRRRQ AGGIPYQELEMALPES+SA N+ETA+GWDQGWDD
Subjt:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD

Query:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV
        +WDE+NAVKSPGG HIGSISANGLTAR NKDGWENDWDV
Subjt:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV

TrEMBL top hitse value%identityAlignment
A0A2N9I2C9 Uncharacterized protein9.4e-5370.29Show/hide
Query:  KLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDDN
        KL L+AGNGEC L   P   GE   +H PS+D+L TPVNGAYFLI  VL+FGG+WACCKFR++   GG+PYQELEM++PES SA NVE+AEGWDQGWDD+
Subjt:  KLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDDN

Query:  WDEDNAVKSPGGSHIGSISANGLTAR-PNKDGWENDWD
        WDE+NAVKSPGG H+GSISANGLT+R  N+DGWENDW+
Subjt:  WDEDNAVKSPGGSHIGSISANGLTAR-PNKDGWENDWD

A0A6J1F4I5 uncharacterized protein LOC1114420922.3e-6790.58Show/hide
Query:  KLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDDN
        KL LDAGNGECVLY SP+VSGE+L LHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQ AGGIPYQELEMALPES+SA NVETA+GWDQGWDD+
Subjt:  KLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDDN

Query:  WDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV
        WDE+NAVKSPGG HIGSISANGLTAR NKDGWENDWDV
Subjt:  WDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV

A0A6J1FLM5 uncharacterized protein LOC1114469301.8e-6790.65Show/hide
Query:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD
        MKL LDAGNGECVLYTSP+VSGEDL LHLPSFDQL TPVNGAYFLILAVLIFGGSWAC K RRRQ AGGIPYQELEMALPES+SA  VETAEGWDQGWDD
Subjt:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD

Query:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV
        +WDE+NAVKSPGG HIGSISANGLTARPNKDGWENDWDV
Subjt:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV

A0A6J1I2Q4 uncharacterized protein LOC1114700029.7e-6688.49Show/hide
Query:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD
        MKL L+AGNGECVLYTSP+V+GEDL LHLPSFDQL TPVNGAYFLILAVLIFGGSWAC K RRRQ AGGIPYQELEMALPES+SA  VETA GWDQGWDD
Subjt:  MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDD

Query:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV
        +WDE+NAVKSPGG HIGSISANGLTARPNKDGWENDWDV
Subjt:  NWDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV

A0A6J1J516 uncharacterized protein LOC1114814261.1e-6489.13Show/hide
Query:  KLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDDN
        KL LDAGNGECVLY SP+VS E+L LHLPSFDQLATPVNGAYFLILAVL FGGSWACCKFRRRQ AGGIPYQELEMALPES+SA NVETA+GWDQGWDD+
Subjt:  KLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDDN

Query:  WDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV
        WDE+NAVKSPGG HIGSISANGLTAR NKDGWENDWDV
Subjt:  WDEDNAVKSPGGSHIGSISANGLTARPNKDGWENDWDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G51580.1 unknown protein4.9e-3855.17Show/hide
Query:  KLTLDAGNGECVLYTSPVVSGEDLL-LHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRR-RQAAGGIPYQELEMA----LPESTSAANVETAEGWD
        K+ LD G G+C L+  P  S E  L  H PS+++L TP+NGAYFLI++V+IFGG WA C  R+ R+A  G+PY+ELE++    L   +   +VETA+ WD
Subjt:  KLTLDAGNGECVLYTSPVVSGEDLL-LHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRR-RQAAGGIPYQELEMA----LPESTSAANVETAEGWD

Query:  QGWDDNWDEDNAVKSPGGSHIG-SISANGLTAR-PNKDGWENDWD
        +GWDD+WDE+NAVKSPG +    SISANGLTAR PN+DGW++DWD
Subjt:  QGWDDNWDEDNAVKSPGGSHIG-SISANGLTAR-PNKDGWENDWD

AT3G51580.2 unknown protein4.9e-3855.17Show/hide
Query:  KLTLDAGNGECVLYTSPVVSGEDLL-LHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRR-RQAAGGIPYQELEMA----LPESTSAANVETAEGWD
        K+ LD G G+C L+  P  S E  L  H PS+++L TP+NGAYFLI++V+IFGG WA C  R+ R+A  G+PY+ELE++    L   +   +VETA+ WD
Subjt:  KLTLDAGNGECVLYTSPVVSGEDLL-LHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRR-RQAAGGIPYQELEMA----LPESTSAANVETAEGWD

Query:  QGWDDNWDEDNAVKSPGGSHIG-SISANGLTAR-PNKDGWENDWD
        +GWDD+WDE+NAVKSPG +    SISANGLTAR PN+DGW++DWD
Subjt:  QGWDDNWDEDNAVKSPGGSHIG-SISANGLTAR-PNKDGWENDWD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTAACATTAGATGCTGGAAATGGAGAATGTGTGCTGTACACAAGCCCTGTTGTTTCCGGAGAAGACCTGCTTCTGCATCTGCCTTCATTTGACCAGCTAGCAAC
ACCAGTAAACGGTGCTTACTTCTTAATTCTAGCAGTCCTCATCTTTGGGGGATCCTGGGCCTGCTGCAAGTTCAGGAGGAGACAAGCAGCTGGTGGCATCCCATATCAAG
AGCTTGAAATGGCACTCCCAGAATCCACCTCAGCTGCCAACGTGGAAACTGCTGAAGGTTGGGATCAGGGTTGGGATGATAACTGGGATGAAGATAATGCTGTGAAATCG
CCAGGTGGCAGCCATATTGGAAGCATTTCAGCCAATGGCCTTACTGCTAGACCCAACAAAGATGGCTGGGAGAATGATTGGGATGTTTAG
mRNA sequenceShow/hide mRNA sequence
AGTCCAGAAATTTGGCTATTCTCGTCCTGAACGAAGGAGAAGATACGCTAGAAGTGAATGTTTCTGTAGGAAACTTTTTCGAAGGGCTTAAAATTTTAAAACATCAGGCA
AAAAGGGTAAAGATCACCATTCCATTGACAACCGAAAAAGGCATGAAACTAACATTAGATGCTGGAAATGGAGAATGTGTGCTGTACACAAGCCCTGTTGTTTCCGGAGA
AGACCTGCTTCTGCATCTGCCTTCATTTGACCAGCTAGCAACACCAGTAAACGGTGCTTACTTCTTAATTCTAGCAGTCCTCATCTTTGGGGGATCCTGGGCCTGCTGCA
AGTTCAGGAGGAGACAAGCAGCTGGTGGCATCCCATATCAAGAGCTTGAAATGGCACTCCCAGAATCCACCTCAGCTGCCAACGTGGAAACTGCTGAAGGTTGGGATCAG
GGTTGGGATGATAACTGGGATGAAGATAATGCTGTGAAATCGCCAGGTGGCAGCCATATTGGAAGCATTTCAGCCAATGGCCTTACTGCTAGACCCAACAAAGATGGCTG
GGAGAATGATTGGGATGTTTAGTCAGTCAATGAACCAACAAAACTTCTGGTCTCTCAACAATTTGATGATCAGTAGCAGGTAAATGTGAAGCACATAATTTTACCACTGA
GGTTATTCAATAGTTGAAAATAAACCTTCCCCCCCTTTTCTGATTAGATTATAGAGTTTTGTAGCTTTTGCTTGTTAGGTCTACAAATTTTTGGGCTTGTTTTGGTGGGA
TGTAGAATGCAT
Protein sequenceShow/hide protein sequence
MKLTLDAGNGECVLYTSPVVSGEDLLLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAAGGIPYQELEMALPESTSAANVETAEGWDQGWDDNWDEDNAVKS
PGGSHIGSISANGLTARPNKDGWENDWDV