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Sed0028055 (gene) of Chayote v1 genome

Gene IDSed0028055
OrganismSechium edule (Chayote v1)
DescriptionEmbryo defective 1273, putative
Genome locationLG11:33275053..33277422
RNA-Seq ExpressionSed0028055
SyntenySed0028055
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064476.1 putative Embryo defective 1273 [Cucumis melo var. makuwa]1.3e-8274.22Show/hide
Query:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK
        MALPASIS+P   S  R+I FK K + LNSC  +  G R+A L SS+KV+++RFMDSN +PI+IENLKEK+Q+VVPEPVK FPWKEAEK+L+ERL+FMGK
Subjt:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK

Query:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ
        ETLKWS LLF  +SS SDFVASIVRNQELLIPIGLF+GVLLTDLLKEISQE+FG+SE+SSFKKQ+YG+G FF+ VKLI Y FAIQAQ F LHVANGGL+Q
Subjt:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ

Query:  VLWLWRNSSRERNRPNEQSPFVGEG
        VLWLWRN  +ERN+PNEQSPFVG+G
Subjt:  VLWLWRNSSRERNRPNEQSPFVGEG

XP_004141304.1 uncharacterized protein LOC101205191 [Cucumis sativus]2.7e-8073.57Show/hide
Query:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK
        MALPASIS+P   S  R+I FK K + LNSC  +  G R+A L SS+KV+++RFMDSN VPI+IENLKEK+QEVVPEPVK FPWKEAEK+++ERL FMGK
Subjt:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK

Query:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ
        ETLKWS LLF  +SS SD VASIVRNQELLIPIGLF+GVLLTDLLKEISQE+FG+SE+SSFKKQ+YG G FF+ VKLI Y FAIQA  F LHVANGGL+Q
Subjt:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ

Query:  VLWLWRNSSRERNRPNEQSPFVGEGTS
        VLWLWRN  RERN+PNEQS FVG+ TS
Subjt:  VLWLWRNSSRERNRPNEQSPFVGEGTS

XP_008452688.1 PREDICTED: uncharacterized protein LOC103493634 [Cucumis melo]1.6e-8374.45Show/hide
Query:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK
        MALPASIS+P   S  R+I FK K + LNSC  +  G R+A L SS+KV+++RFMDSN +PI+IENLKEK+Q+VVPEPVK FPWKEAEK+L+ERL+FMGK
Subjt:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK

Query:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ
        ETLKWS LLF  +SS SDFVASIVRNQELLIPIGLF+GVLLTDLLKEISQE+FG+SE+SSFKKQ+YG+G FF+ VKLI Y FAIQAQ F LHVANGGL+Q
Subjt:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ

Query:  VLWLWRNSSRERNRPNEQSPFVGEGTS
        VLWLWRN  +ERN+PNEQSPFVG+GTS
Subjt:  VLWLWRNSSRERNRPNEQSPFVGEGTS

XP_022159733.1 uncharacterized protein LOC111026039 [Momordica charantia]2.7e-8074.45Show/hide
Query:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK
        MALPASI +     K  +I  K  +  LNSC L+    R+A+LASS K R+S+FMDSNS+P+QIENLKEK+QEVVPEPVK FPWKEAEKMLLERLLFMGK
Subjt:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK

Query:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ
        E  KWS L+F   SSLSDFVASI RNQELLIPIGLFVGVLLTDLLKEISQE+FG+SE+SSFKKQ++ LG  FV VKLIAY FA QAQ+F LHVANGGL+Q
Subjt:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ

Query:  VLWLWRNSSRERNRPNEQSPFVGEGTS
        VLWLWRN SRERNRPNEQSPFV +GTS
Subjt:  VLWLWRNSSRERNRPNEQSPFVGEGTS

XP_038900238.1 uncharacterized protein LOC120087328 [Benincasa hispida]3.3e-8676.42Show/hide
Query:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK
        MALPASIS+P      R+I FKEK S+  + CL+  G+RQA LA+SMKV+++RFMDSNS+PI+IE+LKEK+QEVVPEPVK FPWKEAEK+L+ERLLFMGK
Subjt:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK

Query:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFG--SSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGL
        ETLKWS LLF  +SS SDFVASIVRN+ELLIPIGLF+GVLLTDLLKEISQE+FG  +SE+S FKKQ+YGLG FFV VKLIAY F IQAQ+F LHVANGGL
Subjt:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFG--SSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGL

Query:  VQVLWLWRNSSRERNRPNEQSPFVGEGTS
        +QVLWLWRN SRERNRPNEQSPFVG+GTS
Subjt:  VQVLWLWRNSSRERNRPNEQSPFVGEGTS

TrEMBL top hitse value%identityAlignment
A0A0A0L2N8 Uncharacterized protein1.3e-8073.57Show/hide
Query:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK
        MALPASIS+P   S  R+I FK K + LNSC  +  G R+A L SS+KV+++RFMDSN VPI+IENLKEK+QEVVPEPVK FPWKEAEK+++ERL FMGK
Subjt:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK

Query:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ
        ETLKWS LLF  +SS SD VASIVRNQELLIPIGLF+GVLLTDLLKEISQE+FG+SE+SSFKKQ+YG G FF+ VKLI Y FAIQA  F LHVANGGL+Q
Subjt:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ

Query:  VLWLWRNSSRERNRPNEQSPFVGEGTS
        VLWLWRN  RERN+PNEQS FVG+ TS
Subjt:  VLWLWRNSSRERNRPNEQSPFVGEGTS

A0A1S3BVL5 uncharacterized protein LOC1034936347.5e-8474.45Show/hide
Query:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK
        MALPASIS+P   S  R+I FK K + LNSC  +  G R+A L SS+KV+++RFMDSN +PI+IENLKEK+Q+VVPEPVK FPWKEAEK+L+ERL+FMGK
Subjt:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK

Query:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ
        ETLKWS LLF  +SS SDFVASIVRNQELLIPIGLF+GVLLTDLLKEISQE+FG+SE+SSFKKQ+YG+G FF+ VKLI Y FAIQAQ F LHVANGGL+Q
Subjt:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ

Query:  VLWLWRNSSRERNRPNEQSPFVGEGTS
        VLWLWRN  +ERN+PNEQSPFVG+GTS
Subjt:  VLWLWRNSSRERNRPNEQSPFVGEGTS

A0A5A7VDP4 Putative Embryo defective 12736.4e-8374.22Show/hide
Query:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK
        MALPASIS+P   S  R+I FK K + LNSC  +  G R+A L SS+KV+++RFMDSN +PI+IENLKEK+Q+VVPEPVK FPWKEAEK+L+ERL+FMGK
Subjt:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK

Query:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ
        ETLKWS LLF  +SS SDFVASIVRNQELLIPIGLF+GVLLTDLLKEISQE+FG+SE+SSFKKQ+YG+G FF+ VKLI Y FAIQAQ F LHVANGGL+Q
Subjt:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ

Query:  VLWLWRNSSRERNRPNEQSPFVGEG
        VLWLWRN  +ERN+PNEQSPFVG+G
Subjt:  VLWLWRNSSRERNRPNEQSPFVGEG

A0A5D3D973 Putative Embryo defective 12737.5e-8474.45Show/hide
Query:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK
        MALPASIS+P   S  R+I FK K + LNSC  +  G R+A L SS+KV+++RFMDSN +PI+IENLKEK+Q+VVPEPVK FPWKEAEK+L+ERL+FMGK
Subjt:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK

Query:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ
        ETLKWS LLF  +SS SDFVASIVRNQELLIPIGLF+GVLLTDLLKEISQE+FG+SE+SSFKKQ+YG+G FF+ VKLI Y FAIQAQ F LHVANGGL+Q
Subjt:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ

Query:  VLWLWRNSSRERNRPNEQSPFVGEGTS
        VLWLWRN  +ERN+PNEQSPFVG+GTS
Subjt:  VLWLWRNSSRERNRPNEQSPFVGEGTS

A0A6J1DZN6 uncharacterized protein LOC1110260391.3e-8074.45Show/hide
Query:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK
        MALPASI +     K  +I  K  +  LNSC L+    R+A+LASS K R+S+FMDSNS+P+QIENLKEK+QEVVPEPVK FPWKEAEKMLLERLLFMGK
Subjt:  MALPASISVP--CSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGK

Query:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ
        E  KWS L+F   SSLSDFVASI RNQELLIPIGLFVGVLLTDLLKEISQE+FG+SE+SSFKKQ++ LG  FV VKLIAY FA QAQ+F LHVANGGL+Q
Subjt:  ETLKWSALLFIAVSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQ

Query:  VLWLWRNSSRERNRPNEQSPFVGEGTS
        VLWLWRN SRERNRPNEQSPFV +GTS
Subjt:  VLWLWRNSSRERNRPNEQSPFVGEGTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGCCGGCGTCAATTTCGGTGCCCTGTTCCAAGTTCCGAATGATACCGTTCAAAGAAAAAGCATCTTGGCTTAATAGTTGTTGTTTGATAACTCTGGGTAATCG
CCAAGCGAATCTTGCATCTTCGATGAAAGTAAGATTGTCGCGGTTTATGGATTCTAATTCCGTGCCTATACAAATTGAAAATTTGAAAGAGAAGATACAGGAGGTCGTAC
CTGAACCCGTTAAATTTTTTCCTTGGAAGGAAGCAGAGAAGATGCTGCTGGAGAGACTGCTTTTTATGGGGAAGGAGACACTGAAGTGGTCTGCTCTCTTGTTCATTGCT
GTTAGCTCTTTATCAGATTTTGTAGCATCAATAGTTAGAAACCAGGAGTTACTGATTCCCATTGGTCTATTTGTTGGTGTCTTGCTCACTGACCTTTTAAAGGAGATATC
TCAAGAAATGTTTGGTAGCTCAGAGAAATCAAGCTTCAAGAAGCAAATTTATGGTCTCGGTTTCTTCTTTGTTTTCGTCAAGCTAATAGCGTACTGCTTCGCAATTCAAG
CACAGTCGTTTGCTTTGCATGTTGCAAATGGTGGGTTAGTTCAAGTTTTGTGGCTGTGGAGAAATTCGTCAAGAGAAAGAAATCGACCAAATGAACAGAGCCCTTTTGTT
GGTGAAGGTACTTCCTTAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATAAAATAAAAAAGGAAAAAATGAAAAAAAATTCGGTTCGATTATTGTATCGAAAAAACCCTACATTGAGAAGACGAAGAGGATAACGGCGAACGGCGAAAGCAAGGACA
TCAATGGCGCTGCCGGCGTCAATTTCGGTGCCCTGTTCCAAGTTCCGAATGATACCGTTCAAAGAAAAAGCATCTTGGCTTAATAGTTGTTGTTTGATAACTCTGGGTAA
TCGCCAAGCGAATCTTGCATCTTCGATGAAAGTAAGATTGTCGCGGTTTATGGATTCTAATTCCGTGCCTATACAAATTGAAAATTTGAAAGAGAAGATACAGGAGGTCG
TACCTGAACCCGTTAAATTTTTTCCTTGGAAGGAAGCAGAGAAGATGCTGCTGGAGAGACTGCTTTTTATGGGGAAGGAGACACTGAAGTGGTCTGCTCTCTTGTTCATT
GCTGTTAGCTCTTTATCAGATTTTGTAGCATCAATAGTTAGAAACCAGGAGTTACTGATTCCCATTGGTCTATTTGTTGGTGTCTTGCTCACTGACCTTTTAAAGGAGAT
ATCTCAAGAAATGTTTGGTAGCTCAGAGAAATCAAGCTTCAAGAAGCAAATTTATGGTCTCGGTTTCTTCTTTGTTTTCGTCAAGCTAATAGCGTACTGCTTCGCAATTC
AAGCACAGTCGTTTGCTTTGCATGTTGCAAATGGTGGGTTAGTTCAAGTTTTGTGGCTGTGGAGAAATTCGTCAAGAGAAAGAAATCGACCAAATGAACAGAGCCCTTTT
GTTGGTGAAGGTACTTCCTTAACTTGAACGAATAAGATTGTTTAAGCTATCTATATTCGTTTCCATGAAGAAATTGGCTGTCGTGTAAGGATAGAAACACAATGTTACGA
TACATTCACATATCGGGACCTTGTTTAGCCGTCGAAAAGCATTGGTGAGCGCAATCATGTATGCATAGGTTGTATATGAAACTTTTGCACTGAGAGGCAATGCAGATTAG
CTAGGGCTTGTGTATCAGCTTCATAATCTGATAATGAGCAGTGTTTTGGTGTTTTCTTGTTTCTGCGCTGCCTTTTTGATTAATTTTTGTCCTAACTTATGGCAAATGGC
TTCCCTTTTTCAAATATTCAGC
Protein sequenceShow/hide protein sequence
MALPASISVPCSKFRMIPFKEKASWLNSCCLITLGNRQANLASSMKVRLSRFMDSNSVPIQIENLKEKIQEVVPEPVKFFPWKEAEKMLLERLLFMGKETLKWSALLFIA
VSSLSDFVASIVRNQELLIPIGLFVGVLLTDLLKEISQEMFGSSEKSSFKKQIYGLGFFFVFVKLIAYCFAIQAQSFALHVANGGLVQVLWLWRNSSRERNRPNEQSPFV
GEGTSLT