CuGenDBv2

Gene ID	Sed0028077
Organism	Sechium edule (Chayote v1)
Description	Ubiquitin
Genome location	LG01:5651913..5654824
RNA-Seq Expression	Sed0028077
Synteny	Sed0028077
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0019941 - modification-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0031386 - protein tag (molecular function) GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domains	IPR000626 - Ubiquitin-like domain IPR019954 - Ubiquitin conserved site IPR019956 - Ubiquitin domain IPR029071 - Ubiquitin-like domain superfamily IPR038738 - Nedd8-like ubiquitin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAF7139896.1 hypothetical protein RHSIM_Rhsim06G0241500 [Rhododendron simsii]

5.6e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL

XP_007202716.1 ubiquitin-NEDD8-like protein RUB2 [Prunus persica]

5.6e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL

XP_008226114.1 PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Prunus mume]

5.6e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL

XP_010518981.1 PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Tarenaya hassleriana]

1.6e-76

99.35

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Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGG

XP_012847234.1 PREDICTED: ubiquitin-NEDD8-like protein RUB2 [Erythranthe guttata]

9.6e-77

98.7

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGGG+
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL

TrEMBL top hits

e value

%identity

Alignment

A0A5E4EJU1 PREDICTED: polyubiquitin

2.7e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL

A0A6J5XYH7 Uncharacterized protein

2.7e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL

A0A6P5RPC6 ubiquitin-NEDD8-like protein RUB2

2.7e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL

A0A6P5TLR1 ubiquitin-NEDD8-like protein RUB2

2.7e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL

M5WAU2 Uncharacterized protein

2.7e-77

99.35

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL
        RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL

SwissProt top hits

e value

%identity

Alignment

P0C030 Ubiquitin-NEDD8-like protein RUB1

4.0e-78

98.68

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

P0C031 Ubiquitin-NEDD8-like protein RUB2

4.0e-78

98.68

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

P0C073 Ubiquitin-NEDD8-like protein RUB1

5.3e-78

98.03

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        R+KERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

Q8RUC6 Ubiquitin-NEDD8-like protein RUB2

3.4e-77

98.03

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDY IEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

Q9SHE7 Ubiquitin-NEDD8-like protein RUB1

4.0e-78

98.68

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

Arabidopsis top hits

e value

%identity

Alignment

AT1G31340.1 related to ubiquitin 1

2.9e-79

98.68

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

AT2G35635.1 ubiquitin 7

2.4e-78

98.03

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEP DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
        RIKERVEEKEGIPPVQQRLIYAGKQL DDKTAKDY IEGGSVLHLVLALRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

AT4G02890.1 Ubiquitin family protein

2.6e-64

80.92

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
         +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

AT4G05050.1 ubiquitin 11

2.6e-64

80.92

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
         +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

AT4G05320.2 polyubiquitin 10

2.6e-64

80.92

Show/hide

Query:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID
        MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID
Subjt:  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTID

Query:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG
         +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Subjt:  RIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAGATCTTCGTCAAAACCCTAACTGGTAAGACGATCACGCTCGAGGTCGAGAGCAGTGACACCATTGACAATGTCAAAGCCAAGATCCAGGATAAGGAAGGTATTCC
ACCTGATCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGGCGAACACTTGCAGATTATAACATCCAAAAGGAATCAACCCTTCACCTGGTCTTGAGGCTCA
GGGGAGGTACTATGATTAAGGTCAAGACTCTGACTGGGAAGGAAATTGAGATTGATATTGAGCCAAACGACACGATTGATCGTATCAAGGAGCGGGTTGAGGAGAAAGAG
GGGATTCCCCCTGTACAGCAAAGGCTCATTTATGCCGGCAAACAGCTTGGAGACGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCT
CGCCCTTAGGGGTGGTGGTTTGTAA

mRNA sequence

Show/hide mRNA sequence

CAAATAATAGCAGACATTTAGCCCAATTTTGGTTTGTTCAAGTTTTGCTTAATTTTCCATCACTCGCTCTGTAACTGAGAAATTGGGAAGAATCAGCGATGCAGATCTTC
GTCAAAACCCTAACTGGTAAGACGATCACGCTCGAGGTCGAGAGCAGTGACACCATTGACAATGTCAAAGCCAAGATCCAGGATAAGGAAGGTATTCCACCTGATCAGCA
GAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGGCGAACACTTGCAGATTATAACATCCAAAAGGAATCAACCCTTCACCTGGTCTTGAGGCTCAGGGGAGGTACTA
TGATTAAGGTCAAGACTCTGACTGGGAAGGAAATTGAGATTGATATTGAGCCAAACGACACGATTGATCGTATCAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCT
GTACAGCAAAGGCTCATTTATGCCGGCAAACAGCTTGGAGACGACAAAACGGCTAAAGACTACAACATTGAGGGTGGTTCTGTTCTCCATCTAGTGCTCGCCCTTAGGGG
TGGTGGTTTGTAAAAGCATTTATCACCTCTTGAAATTCTAACTTTTCAGTTCTATTTTTGGTGGTGCTTGATGAATGCATGAAATCAAATATTGGGCCTAAACTTAACTT
TGATCCATTACTCTGTAATAGAGATCTCGCCTGTGCATCTCCATATCTTTTCAAGTTCAACATCAAACCATTTGGTCTGCGTGGAACTAGTTTGTAAAATTTAGTCCCAA
AGTTTATCAATTTTTATTGGGGAATGGAGCTTAATTGTTCTTATGGTTTGATTTCATTTTTCTGGTTCCTCTCCTGTCCTATGACTAGGGCTGTATTGCAGGCAGAGAAG
CGTTTGGACATACTTGTTAAGGTCCATTTCCTACCCTTCTAAATAGTTGAGCTATACGTAAGTTGATCAAGTACTCGTCATTATTAACTTTTTTAATAAATAAATAGTTT
TTTTTTCTTCA

Protein sequence

Show/hide protein sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPNDTIDRIKERVEEKE
GIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL

Sed0028077 (gene) of Chayote v1 genome