CuGenDBv2

Gene ID	Sed0028110
Organism	Sechium edule (Chayote v1)
Description	TPR_REGION domain-containing protein
Genome location	LG03:13438427..13442858
RNA-Seq Expression	Sed0028110
Synteny	Sed0028110
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144772.1 uncharacterized protein LOC101209381 [Cucumis sativus]

5.8e-122

83.96

Show/hide

Query:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG
        MA  SSLK SIS   S H +FT  S F NS KT++ F SPSSLP RI LNHVPPLSLSRR+ VP+VSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVLG
Subjt:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG

Query:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL
        S+AEFDKAI LDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV  AR++FLEVG+D RPVM+EAY+MFKDGG PEKL
Subjt:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL

Query:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS
        VAAFSSGRENEYFYASLYAGLYHEAEK ++AAKQ IVAAC S Y QRSDDYMAALAKVHCLCR+WSFS
Subjt:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS

XP_022946000.1 uncharacterized protein LOC111450218 isoform X1 [Cucurbita moschata]

1.0e-121

83.83

Show/hide

Query:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG
        MAAISSLKPSIS   SFH +FT  S  PNSIK L+   SPSS P RI+LNHVPPLSLSRR+ VP+VSGIWDA+TGGNNPRDAV AIRRGMLLFR+GDV G
Subjt:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG

Query:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL
        S+AEFDKAI LDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGV  AR++FLEVG+D R VM+EAY+MFKDGG PE L
Subjt:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL

Query:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS
        VAAFSSGRENEYFYASLYAGLYHEAEK L+AAKQHIVAAC S YGQRSDDYMAALAKVHCLCR+WS
Subjt:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS

XP_022999589.1 uncharacterized protein LOC111493913 isoform X3 [Cucurbita maxima]

5.3e-123

84.59

Show/hide

Query:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG
        MAAISSLKPSIS   SFH +FT  S  PNS K L+   SPSSLP RI+LNHVPPLSLSRR+ VP+VSGIWDA+TGGNNPRDAVAAIRRGMLLFR+GDV G
Subjt:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG

Query:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL
        S+AEFDKAI LDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNP+DTEESIWCF+CEAQLYGV  AR++FLEVG+D RPVM+EAY+MFKDGG PEKL
Subjt:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL

Query:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS
        VAAFSSGRENEYFYASLYAGLYHEAEK L+AAKQHIVAAC S YGQRSDDYMAALAKVHCLCR+WS
Subjt:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS

XP_023545315.1 uncharacterized protein LOC111804759 isoform X1 [Cucurbita pepo subsp. pepo]

2.9e-121

82.71

Show/hide

Query:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG
        MAAIS+LKPSIS   SFH +FT  S  PNS K L+   SP+S P +I+LNHVPPLSLSRR+ VP+VSGIWDA+TGGNNPRDAV AIRRGMLLFR+GDV G
Subjt:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG

Query:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL
        S+AEFDKAI LDPRQKAYLWQRGLSLYYLDRF+EGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGV  AR++FLEVG+D RPVM+EAY+MFKDGG PEKL
Subjt:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL

Query:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS
        VAAFSSGRENEYFYASLYAGLYHEAEK L+AAKQHIVAAC S YGQRSDDYMAALAKVHCLCR+WS
Subjt:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS

XP_038889663.1 uncharacterized protein LOC120079523 [Benincasa hispida]

8.2e-124

85.07

Show/hide

Query:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG
        MAAISSLK SIS   S H  F   S FPNS KTL+   SPSSLP RI LNHVPPLSLSRR+ VP+VSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVLG
Subjt:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG

Query:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL
        S+AEFDKAI LDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV  AR++FLEVG+DSRPVM+EAY+MFKDGG PEKL
Subjt:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL

Query:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS
        +AAFSSGRENEYFYASLYAGLYHEAEK L+AAKQHIVAAC S YGQRSDDYMAAL +VHCLCR+WSFS
Subjt:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGH0 TPR_REGION domain-containing protein

2.8e-122

83.96

Show/hide

Query:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG
        MA  SSLK SIS   S H +FT  S F NS KT++ F SPSSLP RI LNHVPPLSLSRR+ VP+VSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVLG
Subjt:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG

Query:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL
        S+AEFDKAI LDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV  AR++FLEVG+D RPVM+EAY+MFKDGG PEKL
Subjt:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL

Query:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS
        VAAFSSGRENEYFYASLYAGLYHEAEK ++AAKQ IVAAC S Y QRSDDYMAALAKVHCLCR+WSFS
Subjt:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS

A0A5D3BC02 TPR_REGION domain-containing protein

5.3e-121

83.21

Show/hide

Query:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG
        MA  S LK SIS   S H +FT  S F NS KT++ F SP+SLP RI LNHVPPLSLSRR+ VP+VSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDVLG
Subjt:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG

Query:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL
        S+AEFDKAI LDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV  AR++FLEVG+D RPVM+EAY+MFK+GG PEKL
Subjt:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL

Query:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS
        VAAFSSGRENEYFYASLYAGLYHEAEK ++AAKQHIVAAC S YGQRSDDYMAALAKVHCL R+WSFS
Subjt:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS

A0A6J1DQ08 uncharacterized protein LOC111023257

3.1e-121

83.21

Show/hide

Query:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG
        MA ISSLKP+IS P S  T+FT  S  PNSI T + F SP+SLP RI+LN +P  SLSRR+ VP+VSGIWDA+TGGNNPRDAVAAIRRGMLLFRQGDV G
Subjt:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG

Query:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL
        S+AEFDKAI LDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGV  +R++FLEVG+DSRPVM+EAY MFKDGG PEKL
Subjt:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL

Query:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS
        VAAFSSGRENEYFYASLYAGLYHE+EK+L+AAKQHIVAAC S YGQRSDDYMAALAKVHCLCR+WSFS
Subjt:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS

A0A6J1G2K4 uncharacterized protein LOC111450218 isoform X1

4.8e-122

83.83

Show/hide

Query:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG
        MAAISSLKPSIS   SFH +FT  S  PNSIK L+   SPSS P RI+LNHVPPLSLSRR+ VP+VSGIWDA+TGGNNPRDAV AIRRGMLLFR+GDV G
Subjt:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG

Query:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL
        S+AEFDKAI LDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGV  AR++FLEVG+D R VM+EAY+MFKDGG PE L
Subjt:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL

Query:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS
        VAAFSSGRENEYFYASLYAGLYHEAEK L+AAKQHIVAAC S YGQRSDDYMAALAKVHCLCR+WS
Subjt:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS

A0A6J1KHI1 uncharacterized protein LOC111493913 isoform X3

2.6e-123

84.59

Show/hide

Query:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG
        MAAISSLKPSIS   SFH +FT  S  PNS K L+   SPSSLP RI+LNHVPPLSLSRR+ VP+VSGIWDA+TGGNNPRDAVAAIRRGMLLFR+GDV G
Subjt:  MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLG

Query:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL
        S+AEFDKAI LDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNP+DTEESIWCF+CEAQLYGV  AR++FLEVG+D RPVM+EAY+MFKDGG PEKL
Subjt:  SVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKL

Query:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS
        VAAFSSGRENEYFYASLYAGLYHEAEK L+AAKQHIVAAC S YGQRSDDYMAALAKVHCLCR+WS
Subjt:  VAAFSSGRENEYFYASLYAGLYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS

SwissProt top hits

e value

%identity

Alignment

Q1C3L9 Lipoprotein NlpI

3.9e-04

29.33

Show/hide

Query:  GMLLFRQGDVLGSVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQL
        G+ L + G+   +   FD  + LDP        RG++LYY  RF    +  +     +PND   S+W +L E ++
Subjt:  GMLLFRQGDVLGSVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQL

Q1CM50 Lipoprotein NlpI

3.9e-04

29.33

Show/hide

Query:  GMLLFRQGDVLGSVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQL
        G+ L + G+   +   FD  + LDP        RG++LYY  RF    +  +     +PND   S+W +L E ++
Subjt:  GMLLFRQGDVLGSVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQL

Q7CKI5 Lipoprotein NlpI

3.9e-04

29.33

Show/hide

Query:  GMLLFRQGDVLGSVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQL
        G+ L + G+   +   FD  + LDP        RG++LYY  RF    +  +     +PND   S+W +L E ++
Subjt:  GMLLFRQGDVLGSVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQL

Arabidopsis top hits

e value

%identity

Alignment

AT1G53300.1 tetratricopetide-repeat thioredoxin-like 1

1.8e-04

27.34

Show/hide

Query:  SLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGSVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIW
        S S   +    + IW     G+   D+    R G  ++R+G    ++  +D+AIAL P   AY   R  +L  L R  E  ++    V  +PN       
Subjt:  SLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGSVAEFDKAIALDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIW

Query:  CFLCEAQLYGVHAARKQFLEVGKDSRPV
          L   +L  V++ARK    +G+ S P+
Subjt:  CFLCEAQLYGVHAARKQFLEVGKDSRPV

AT3G05625.1 Tetratricopeptide repeat (TPR)-like superfamily protein

6.9e-97

70.2

Show/hide

Query:  SSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGG--NNPRDAVAAIRRGMLLFRQGDVLGSVAEFDKAIALDPRQKAYLWQ
        S T P     +  F + S      + +  PP +LSRR+ +P+VS IWDAITGG  +NPR+A+AA+RRGM LFRQGDV GSVAEFD+AI LDPRQKAYLWQ
Subjt:  SSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGG--NNPRDAVAAIRRGMLLFRQGDVLGSVAEFDKAIALDPRQKAYLWQ

Query:  RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKLVAAFSSGRENEYFYASLYAGL
        RGLSLYY+DRFEEGAEQFR+DVAQNPNDTEESIWCF+CEA+L+GV  AR QFLEVG+DSRPVM+EAY++FK+GG+PEKLV  FSSG+ +EYFYASLYAGL
Subjt:  RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKLVAAFSSGRENEYFYASLYAGL

Query:  YHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS
        Y+EAE     AK H+ AAC S YGQRSDDYMA+LAKVHCLCR+WS
Subjt:  YHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTGCAATTTCTAGCCTCAAACCCTCCATTTCCACCCCCCCTTCGTTTCACACAACGTTCACTACTTCTTCTACTTTCCCGAATTCAATCAAAACCCTAAAAAAATT
TCCCTCTCCGAGCTCGCTTCCGACCAGAATCGAGCTCAATCACGTCCCGCCATTGTCGCTGTCTCGAAGAGTGCTTGTTCCTGCAGTTTCTGGAATTTGGGACGCCATAA
CAGGGGGGAACAACCCTCGCGACGCCGTTGCTGCTATTCGGCGAGGAATGCTTCTCTTCAGACAGGGCGATGTTTTGGGATCTGTTGCGGAATTTGATAAGGCGATTGCG
TTGGATCCTCGTCAAAAGGCATATCTTTGGCAAAGAGGGCTTTCACTTTACTACCTTGATAGATTTGAAGAGGGAGCCGAGCAGTTTCGATTAGATGTTGCACAAAATCC
AAATGACACAGAGGAATCTATTTGGTGTTTTCTTTGTGAAGCCCAATTGTATGGAGTTCATGCAGCAAGAAAACAGTTTCTTGAGGTTGGTAAAGATTCACGACCAGTCA
TGCAGGAAGCTTACAGCATGTTTAAAGACGGCGGCGAACCAGAGAAACTTGTTGCTGCCTTCTCAAGTGGCCGTGAGAATGAGTACTTTTACGCTTCACTATATGCTGGG
CTTTATCACGAAGCAGAGAAAAATTTGAATGCAGCCAAACAGCATATAGTTGCAGCTTGCCTGTCTGCTTATGGACAGAGGTCTGATGATTACATGGCTGCACTTGCCAA
AGTTCACTGCCTCTGTAGAAGCTGGAGTTTCAGTTGA

mRNA sequence

Show/hide mRNA sequence

GCCTTATCTTCATCAATGGACAGTACAGAGACATCGTCTCCATCTCCAAATTCTCGCTTACACTTTCCCAGTGAGCTCAATCTTCTCCAACTTCATCATCAATGGCTGCA
ATTTCTAGCCTCAAACCCTCCATTTCCACCCCCCCTTCGTTTCACACAACGTTCACTACTTCTTCTACTTTCCCGAATTCAATCAAAACCCTAAAAAAATTTCCCTCTCC
GAGCTCGCTTCCGACCAGAATCGAGCTCAATCACGTCCCGCCATTGTCGCTGTCTCGAAGAGTGCTTGTTCCTGCAGTTTCTGGAATTTGGGACGCCATAACAGGGGGGA
ACAACCCTCGCGACGCCGTTGCTGCTATTCGGCGAGGAATGCTTCTCTTCAGACAGGGCGATGTTTTGGGATCTGTTGCGGAATTTGATAAGGCGATTGCGTTGGATCCT
CGTCAAAAGGCATATCTTTGGCAAAGAGGGCTTTCACTTTACTACCTTGATAGATTTGAAGAGGGAGCCGAGCAGTTTCGATTAGATGTTGCACAAAATCCAAATGACAC
AGAGGAATCTATTTGGTGTTTTCTTTGTGAAGCCCAATTGTATGGAGTTCATGCAGCAAGAAAACAGTTTCTTGAGGTTGGTAAAGATTCACGACCAGTCATGCAGGAAG
CTTACAGCATGTTTAAAGACGGCGGCGAACCAGAGAAACTTGTTGCTGCCTTCTCAAGTGGCCGTGAGAATGAGTACTTTTACGCTTCACTATATGCTGGGCTTTATCAC
GAAGCAGAGAAAAATTTGAATGCAGCCAAACAGCATATAGTTGCAGCTTGCCTGTCTGCTTATGGACAGAGGTCTGATGATTACATGGCTGCACTTGCCAAAGTTCACTG
CCTCTGTAGAAGCTGGAGTTTCAGTTGAAGAAATCTCAGCTAGTTGCCTAGGTGCCATATTCTACCATTTATTTTCCTTCTCTTCTTGTGTACAATCTAAATAAAAGACA
TTGGCCTTTTCGATCGAGATCGAATTTGAATTTATCTTGGGGCATTAACTTTGTAGTCCTCGAATTAATCTTGGGTCAAATGTGTTGTTATAAAAGTAGAGAAGGAGCCT
ATTTACTTATTGTGTTGTTATGTGTTGTCTATATATATACATATATTGTGTTGACGAAAAGTTCTATAATATCATATGATTTTTCTT

Protein sequence

Show/hide protein sequence

MAAISSLKPSISTPPSFHTTFTTSSTFPNSIKTLKKFPSPSSLPTRIELNHVPPLSLSRRVLVPAVSGIWDAITGGNNPRDAVAAIRRGMLLFRQGDVLGSVAEFDKAIA
LDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVHAARKQFLEVGKDSRPVMQEAYSMFKDGGEPEKLVAAFSSGRENEYFYASLYAG
LYHEAEKNLNAAKQHIVAACLSAYGQRSDDYMAALAKVHCLCRSWSFS

Sed0028110 (gene) of Chayote v1 genome