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Sed0028112 (gene) of Chayote v1 genome

Gene IDSed0028112
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function, DUF584
Genome locationLG10:4013983..4015167
RNA-Seq ExpressionSed0028112
SyntenySed0028112
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011658149.1 uncharacterized protein LOC101209587 isoform X1 [Cucumis sativus]2.2e-5565.33Show/hide
Query:  MAGSNTRWSNEFHGKSIKDEDFDEETTW-----ETEE------VSRNFNQCNSSSSA--------------------PKMIPKVKATANEESKTVKKRSS
        MAGSNT WSN FHGKSIKDEDFDEE TW     E +E      +S   N   SSSS+                    PKMIPK K +AN+E KTV KRSS
Subjt:  MAGSNTRWSNEFHGKSIKDEDFDEETTW-----ETEE------VSRNFNQCNSSSSA--------------------PKMIPKVKATANEESKTVKKRSS

Query:  APLDIPDWSKIYGRNGNMSSWMN-------DGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        APLDIPDWSKIYGRNGNM SW+N       D +A +GFVNDDD+ ++DVMVPPHEWIARKL R+QISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  APLDIPDWSKIYGRNGNMSSWMN-------DGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

XP_011658151.1 uncharacterized protein LOC101209587 isoform X2 [Cucumis sativus]2.2e-5565.33Show/hide
Query:  MAGSNTRWSNEFHGKSIKDEDFDEETTW-----ETEE------VSRNFNQCNSSSSA--------------------PKMIPKVKATANEESKTVKKRSS
        MAGSNT WSN FHGKSIKDEDFDEE TW     E +E      +S   N   SSSS+                    PKMIPK K +AN+E KTV KRSS
Subjt:  MAGSNTRWSNEFHGKSIKDEDFDEETTW-----ETEE------VSRNFNQCNSSSSA--------------------PKMIPKVKATANEESKTVKKRSS

Query:  APLDIPDWSKIYGRNGNMSSWMN-------DGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        APLDIPDWSKIYGRNGNM SW+N       D +A +GFVNDDD+ ++DVMVPPHEWIARKL R+QISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  APLDIPDWSKIYGRNGNMSSWMN-------DGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

XP_022950214.1 uncharacterized protein LOC111453373 [Cucurbita moschata]2.8e-5567.55Show/hide
Query:  MAGSNTRWSNEFHGKSIKDEDFDEETTW------ETEEVS-------RNFNQ-----------CNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPD
        MAGSNTRWS+ FHGKSIKDEDFDEE  W      +TEE S       ++FN            C   SSAPKMIPK K T N+E KTV KRSSAPL+IPD
Subjt:  MAGSNTRWSNEFHGKSIKDEDFDEETTW------ETEEVS-------RNFNQ-----------CNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPD

Query:  WSKIYGRNGNMSS-WMNDGSACHGFVNDD--DDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        WSKIYGRNGNM S WM++G   +GF+NDD  ++ ++DVMVPPHEWIARKL R+QISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  WSKIYGRNGNMSS-WMNDGSACHGFVNDD--DDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

XP_022978870.1 uncharacterized protein LOC111478694 [Cucurbita maxima]1.3e-5567.54Show/hide
Query:  MAGSNTRWSNEFHGKSIKDEDFDEETTW------ETEEVS-------RNFNQ-------------CNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDI
        MAGSNTRWS+ FHGKSIKDEDFDEE  W      + EE S       ++FN              C   SSAPKMIPK K T N+E KTV KRSSAPL+I
Subjt:  MAGSNTRWSNEFHGKSIKDEDFDEETTW------ETEEVS-------RNFNQ-------------CNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDI

Query:  PDWSKIYGRNGNM-SSWMNDGSACHGFVNDDDD---HDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        PDWSKIYGRNGNM  SWM++G   +GF+NDDDD    +DDVMVPPHEWIARKL R+QISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  PDWSKIYGRNGNM-SSWMNDGSACHGFVNDDDD---HDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

XP_038881073.1 uncharacterized protein LOC120072694 [Benincasa hispida]2.7e-5868.02Show/hide
Query:  MAGSNTRWSNEFHGKSIKDEDFDEETTW----ETEE------VSRNFNQCNSS--------------------SSAPKMIPKVKATANEESKTVKKRSSA
        MAGSNTRWSN F GKSIKDEDFDEE TW    E +E      +S  FN  +SS                    SSAPKMIPK K TAN+E  TV KRSSA
Subjt:  MAGSNTRWSNEFHGKSIKDEDFDEETTW----ETEE------VSRNFNQCNSS--------------------SSAPKMIPKVKATANEESKTVKKRSSA

Query:  PLDIPDWSKIYGRNGNMSSWMN------DGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        PL+IPDWSKIYGRNGNM SW+N      DG+AC+GFVNDDDD ++DV+VPPHEWIARKL RSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  PLDIPDWSKIYGRNGNMSSWMN------DGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

TrEMBL top hitse value%identityAlignment
A0A0A0KN13 Uncharacterized protein1.0e-5565.33Show/hide
Query:  MAGSNTRWSNEFHGKSIKDEDFDEETTW-----ETEE------VSRNFNQCNSSSSA--------------------PKMIPKVKATANEESKTVKKRSS
        MAGSNT WSN FHGKSIKDEDFDEE TW     E +E      +S   N   SSSS+                    PKMIPK K +AN+E KTV KRSS
Subjt:  MAGSNTRWSNEFHGKSIKDEDFDEETTW-----ETEE------VSRNFNQCNSSSSA--------------------PKMIPKVKATANEESKTVKKRSS

Query:  APLDIPDWSKIYGRNGNMSSWMN-------DGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        APLDIPDWSKIYGRNGNM SW+N       D +A +GFVNDDD+ ++DVMVPPHEWIARKL R+QISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  APLDIPDWSKIYGRNGNMSSWMN-------DGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

A0A1S3B0T6 uncharacterized protein LOC103484610 isoform X22.3e-5565.15Show/hide
Query:  MAGSNTRWSNEFHGKSIKDEDFDEETTW-----ETEE------VSRNFNQCNSSSSA-------------------PKMIPKVKATANEESKTVKKRSSA
        MAGSNT WSN FHGKSIKDEDFDEE  W     E +E      +S   N   SSSS+                   PKMIPK K TAN+E KTV KRSSA
Subjt:  MAGSNTRWSNEFHGKSIKDEDFDEETTW-----ETEE------VSRNFNQCNSSSSA-------------------PKMIPKVKATANEESKTVKKRSSA

Query:  PLDIPDWSKIYGRNGNMSSW-------MNDGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        PLDIPDWSKIYGRNGNM SW       +ND +A +GFVNDDD+ ++DVMVPPHEWIARKL R+QISSFSVCEGIGRTLKGRDLSK+RNAILTKTGFLE
Subjt:  PLDIPDWSKIYGRNGNMSSW-------MNDGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

A0A1S4DT69 uncharacterized protein LOC103484610 isoform X12.3e-5565.15Show/hide
Query:  MAGSNTRWSNEFHGKSIKDEDFDEETTW-----ETEE------VSRNFNQCNSSSSA-------------------PKMIPKVKATANEESKTVKKRSSA
        MAGSNT WSN FHGKSIKDEDFDEE  W     E +E      +S   N   SSSS+                   PKMIPK K TAN+E KTV KRSSA
Subjt:  MAGSNTRWSNEFHGKSIKDEDFDEETTW-----ETEE------VSRNFNQCNSSSSA-------------------PKMIPKVKATANEESKTVKKRSSA

Query:  PLDIPDWSKIYGRNGNMSSW-------MNDGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        PLDIPDWSKIYGRNGNM SW       +ND +A +GFVNDDD+ ++DVMVPPHEWIARKL R+QISSFSVCEGIGRTLKGRDLSK+RNAILTKTGFLE
Subjt:  PLDIPDWSKIYGRNGNMSSW-------MNDGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

A0A6J1GF36 uncharacterized protein LOC1114533731.4e-5567.55Show/hide
Query:  MAGSNTRWSNEFHGKSIKDEDFDEETTW------ETEEVS-------RNFNQ-----------CNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPD
        MAGSNTRWS+ FHGKSIKDEDFDEE  W      +TEE S       ++FN            C   SSAPKMIPK K T N+E KTV KRSSAPL+IPD
Subjt:  MAGSNTRWSNEFHGKSIKDEDFDEETTW------ETEEVS-------RNFNQ-----------CNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPD

Query:  WSKIYGRNGNMSS-WMNDGSACHGFVNDD--DDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        WSKIYGRNGNM S WM++G   +GF+NDD  ++ ++DVMVPPHEWIARKL R+QISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  WSKIYGRNGNMSS-WMNDGSACHGFVNDD--DDHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

A0A6J1IRG2 uncharacterized protein LOC1114786946.2e-5667.54Show/hide
Query:  MAGSNTRWSNEFHGKSIKDEDFDEETTW------ETEEVS-------RNFNQ-------------CNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDI
        MAGSNTRWS+ FHGKSIKDEDFDEE  W      + EE S       ++FN              C   SSAPKMIPK K T N+E KTV KRSSAPL+I
Subjt:  MAGSNTRWSNEFHGKSIKDEDFDEETTW------ETEEVS-------RNFNQ-------------CNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDI

Query:  PDWSKIYGRNGNM-SSWMNDGSACHGFVNDDDD---HDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        PDWSKIYGRNGNM  SWM++G   +GF+NDDDD    +DDVMVPPHEWIARKL R+QISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
Subjt:  PDWSKIYGRNGNM-SSWMNDGSACHGFVNDDDD---HDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G61930.1 Protein of unknown function, DUF5841.8e-1538.02Show/hide
Query:  SSAPKMIPKVKATANE-ESKTVKKRSSAPLDIPDWSKIYGRNGNMSSWMNDGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQI----SSFSVCEGIG
        SS+P ++ K+     E E    K  SSAP+++PDWSKIY         ++   + H   ++DD+ ++  M+PPHE++A+   R          SV +G+G
Subjt:  SSAPKMIPKVKATANE-ESKTVKKRSSAPLDIPDWSKIYGRNGNMSSWMNDGSACHGFVNDDDDHDDDVMVPPHEWIARKLERSQI----SSFSVCEGIG

Query:  RTLKGRDLSKVRNAILTKTGF
        RTLKGR+L +VR+AI ++TGF
Subjt:  RTLKGRDLSKVRNAILTKTGF

AT3G45210.1 Protein of unknown function, DUF5848.0e-1636.5Show/hide
Query:  ETTWETEEVSRNFNQCNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPDWSKIYGRNGNMSSWMNDGSACHGFVNDDDDHDDDVMVPPHEWIARKLE
        ++ +E +E     N+ +S     K+I   + ++     T    SS P+++ +WSKI G+    S              ++DD   +  +PPHE++A    
Subjt:  ETTWETEEVSRNFNQCNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPDWSKIYGRNGNMSSWMNDGSACHGFVNDDDDHDDDVMVPPHEWIARKLE

Query:  RSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        +++++SFSV EGIGRTLKGRD+S+VRNAIL KTGFL+
Subjt:  RSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

AT4G04630.1 Protein of unknown function, DUF5847.2e-3350Show/hide
Query:  DEDFDEETTW-----------ETEEVSRNFNQCNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPDWSKIYG--RNGNMSSWMNDGSACHGFVNDDD
        DE+F EE  W           E +    +F+  +SSSS+P  I + K  +        K+SSAP+++PDWSK+YG  ++   SS ++  +A     +DDD
Subjt:  DEDFDEETTW-----------ETEEVSRNFNQCNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPDWSKIYG--RNGNMSSWMNDGSACHGFVNDDD

Query:  DHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        + DD  MVPPHEW+ARKL R+QISSFS+CEG+GRTLKGRDLSKVRNA+L+KTGFLE
Subjt:  DHDDDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

AT4G21970.1 Protein of unknown function, DUF5841.7e-2951.63Show/hide
Query:  EDFDEETTW------ETEEVSRNFNQCN-----SSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPDWSKIYGRNGNMSSWMNDGSACHGFVNDDDDHD
        E+F EE  W      ET+      ++ N     SSSS+ + IPK     NE S    K+SSAP++IPDWSK+YG      S  N  S  H +  DDD  D
Subjt:  EDFDEETTW------ETEEVSRNFNQCN-----SSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPDWSKIYGRNGNMSSWMNDGSACHGFVNDDDDHD

Query:  DDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE
        +  MVPPHE +A++L R+QISSFS+CEGIGRTLKGRDLSK RNA+LT+TGFLE
Subjt:  DDVMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE

AT5G60680.1 Protein of unknown function, DUF5846.8e-1539.71Show/hide
Query:  FNQCNSSSSAPKMIPKVKATANEESKTVKKRSSA---------PLDIPDWSKI----YGRNGNMSSWMNDGSACHGFVNDDDDHDDDVMVPPHEWIARKL
        FN  +S S  P    K+ ++     K+  + S+A         P+++PDWSKI    Y  N   S   ND        +DDD+ D    +PPHE++A   
Subjt:  FNQCNSSSSAPKMIPKVKATANEESKTVKKRSSA---------PLDIPDWSKI----YGRNGNMSSWMNDGSACHGFVNDDDDHDDDVMVPPHEWIARKL

Query:  ERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGF
         +++++SFSV EG+GRTLKGRDLS+VRNAI  K GF
Subjt:  ERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGTTCCAACACCAGATGGAGCAATGAATTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAAACAACATGGGAAACAGAAGAAGTATCAAGAAATTT
CAACCAATGCAATTCTTCTTCTTCTGCTCCTAAAATGATACCAAAAGTCAAAGCAACAGCAAATGAAGAATCCAAAACTGTGAAGAAGAGATCTTCAGCTCCTTTGGACA
TTCCAGATTGGTCCAAGATTTATGGAAGAAATGGAAATATGAGTTCTTGGATGAATGATGGTTCTGCATGCCATGGCTTTGTTAATGATGATGATGATCATGATGATGAT
GTTATGGTTCCTCCTCATGAATGGATTGCTAGGAAGCTTGAAAGAAGCCAAATTTCATCTTTTTCAGTGTGTGAAGGTATTGGAAGAACATTGAAAGGAAGAGATCTAAG
TAAAGTGAGAAATGCCATTTTGACTAAAACTGGTTTTTTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
CTTTGGTTTTTGTTCTAAGTCTCTTTTCAAACAAATCCCATCTTATTAAAACAGCTAATTATATCAGCTTTTTGATAGATCATGAAAGTACAGCTCATCTATTGTTTGCT
AATCCTTTTTGGGGATTCCCTATTCTTGGTGGGTGACATTTCTTAGCCTGAGCTGAGACTCTTGAAATCTGTGATTTTCTCTAGTAGAATTCAAATCAAACAGAATGGCA
GGTTCCAACACCAGATGGAGCAATGAATTTCATGGAAAATCAATCAAAGATGAAGACTTTGATGAAGAAACAACATGGGAAACAGAAGAAGTATCAAGAAATTTCAACCA
ATGCAATTCTTCTTCTTCTGCTCCTAAAATGATACCAAAAGTCAAAGCAACAGCAAATGAAGAATCCAAAACTGTGAAGAAGAGATCTTCAGCTCCTTTGGACATTCCAG
ATTGGTCCAAGATTTATGGAAGAAATGGAAATATGAGTTCTTGGATGAATGATGGTTCTGCATGCCATGGCTTTGTTAATGATGATGATGATCATGATGATGATGTTATG
GTTCCTCCTCATGAATGGATTGCTAGGAAGCTTGAAAGAAGCCAAATTTCATCTTTTTCAGTGTGTGAAGGTATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGT
GAGAAATGCCATTTTGACTAAAACTGGTTTTTTGGAGTGATGATCATCATGGGGATGCTATTTTTCTTCCTTTTTTTTGTTTAAGTAAAATCTTATCTGAATTGAAATTT
CAAGAGAGATAAGGGTAAAAGTTTAGAGATTGAGAA
Protein sequenceShow/hide protein sequence
MAGSNTRWSNEFHGKSIKDEDFDEETTWETEEVSRNFNQCNSSSSAPKMIPKVKATANEESKTVKKRSSAPLDIPDWSKIYGRNGNMSSWMNDGSACHGFVNDDDDHDDD
VMVPPHEWIARKLERSQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE