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Sed0028136 (gene) of Chayote v1 genome

Gene IDSed0028136
OrganismSechium edule (Chayote v1)
DescriptionE3 UFM1-protein like
Genome locationLG01:9296142..9297185
RNA-Seq ExpressionSed0028136
SyntenySed0028136
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065056.1 uncharacterized protein E6C27_scaffold82G003850 [Cucumis melo var. makuwa]1.1e-3160.12Show/hide
Query:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK
        ME RKLT DADFA +VLCD WNRKEE  K II H QFTV+  EGSTSS+ S       DD  LSS+SSSS  S SS+SS SS  S+LS++EL EQQ P+K
Subjt:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK

Query:  KGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD
        KGLSKFY GKSRTFSSLSDVK I+DL                 ATISKK G+S FAT + K D
Subjt:  KGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD

KAG6598765.1 hypothetical protein SDJN03_08543, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2052.12Show/hide
Query:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQF--TVSCLEGSTSSVNSSDDGDLSSYSSSSSCS----CSSASSASSAPSMLSRAELSEQQP--P
        MEFRKLT DADFA ++    +NRKEE  K  IPH      VSC E STSS+ S     LSS SSSS C      S +SS+SS+ S+LSR E+ E+Q    
Subjt:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQF--TVSCLEGSTSSVNSSDDGDLSSYSSSSSCS----CSSASSASSAPSMLSRAELSEQQP--P

Query:  VKKGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD
        +KKGLSKFY GKSRTFSSLSDVKC+EDL                 ATISKK G++S AT + + D
Subjt:  VKKGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD

KAG7029705.1 hypothetical protein SDJN02_08047 [Cucurbita argyrosperma subsp. argyrosperma]9.0e-2152.73Show/hide
Query:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQF--TVSCLEGSTSSVNSSDDGDLSSYSSSSSCS----CSSASSASSAPSMLSRAELSEQQP--P
        MEFRKLT DADFA ++    +NRKEE  K  IPH      VSC E STSS+ S     LSS SSSS C      S +SS+SS+ S+LSR E+ E+Q    
Subjt:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQF--TVSCLEGSTSSVNSSDDGDLSSYSSSSSCS----CSSASSASSAPSMLSRAELSEQQP--P

Query:  VKKGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD
        +KKGLSKFY GKSRTFSSLSDVKC+EDL                 ATISKK G++S AT + K D
Subjt:  VKKGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD

XP_008444987.1 PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo]7.8e-3361.35Show/hide
Query:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK
        ME RKLT DADFA +VLCD WNRKEE  K II HFQFTV+  EGSTSS+ S       DD  LSS+SSSS  S SS+SS SS  S+LS++EL EQQ P+K
Subjt:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK

Query:  KGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD
        KGLSKFY GKSRTFSSLSDVK IEDL                 ATISKK G+S FAT + K D
Subjt:  KGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD

XP_031737345.1 uncharacterized protein LOC105434656 [Cucumis sativus]7.1e-3461.96Show/hide
Query:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK
        ME RKLT DADFA +VLCD WNRKEE  K II HFQFTV+  EGSTSS+ S       D+  LSS+SSSSSC     SS SS  S+LS++EL EQQ P+K
Subjt:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK

Query:  KGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD
        KGLSKFY GKSRTFSSLSDVK IEDL                 ATISKK G+SSFAT L KAD
Subjt:  KGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD

TrEMBL top hitse value%identityAlignment
A0A0A0LLW5 Uncharacterized protein1.2e-1561Show/hide
Query:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK
        ME RKLT DADFA +VLCD WNRKEE  K II HFQFTV+  EGSTSS+ S       D+  LSS+SSSSSC     SS SS  S+LS++EL EQQ P+K
Subjt:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK

A0A1S3BBN3 uncharacterized protein LOC1034881653.8e-3361.35Show/hide
Query:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK
        ME RKLT DADFA +VLCD WNRKEE  K II HFQFTV+  EGSTSS+ S       DD  LSS+SSSS  S SS+SS SS  S+LS++EL EQQ P+K
Subjt:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK

Query:  KGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD
        KGLSKFY GKSRTFSSLSDVK IEDL                 ATISKK G+S FAT + K D
Subjt:  KGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD

A0A5A7VFF0 Uncharacterized protein5.5e-3260.12Show/hide
Query:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK
        ME RKLT DADFA +VLCD WNRKEE  K II H QFTV+  EGSTSS+ S       DD  LSS+SSSS  S SS+SS SS  S+LS++EL EQQ P+K
Subjt:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNS------SDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVK

Query:  KGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD
        KGLSKFY GKSRTFSSLSDVK I+DL                 ATISKK G+S FAT + K D
Subjt:  KGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD

A0A6J1HB27 uncharacterized protein LOC1114623844.8e-2051.22Show/hide
Query:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQF--TVSCLEGSTSSVNSSDDGDLSSYSSSSSC---SCSSASSASSAPSMLSRAELSEQQP--PV
        MEFRKLT DADFA ++    +NRKEE  K  IPH      VSC E STSS+ SS        SSSS C   + SS SS+SS+ S+LS+ E+ E+Q    +
Subjt:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQF--TVSCLEGSTSSVNSSDDGDLSSYSSSSSC---SCSSASSASSAPSMLSRAELSEQQP--PV

Query:  KKGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD
        KKGLSKFY GKSRTFSSLSDVKC++DL                 ATISKK G++S AT + K D
Subjt:  KKGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD

A0A6J1KC75 uncharacterized protein LOC1114919762.2e-2052.44Show/hide
Query:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPH-FQFT-VSCLEGSTSSVNSSDDGDLSSYSSSSSC---SCSSASSASSAPSMLSRAELSEQQP--PV
        MEFRKLT DADFA ++    +NRKEE  K  IPH  QF+ VSC E STSS+ SS        SSSS C   + SS SS+SS+ S+LS+ E+ E+Q    +
Subjt:  MEFRKLTADADFAITVLCDHWNRKEENNKPIIPH-FQFT-VSCLEGSTSSVNSSDDGDLSSYSSSSSC---SCSSASSASSAPSMLSRAELSEQQP--PV

Query:  KKGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD
        KKGLSKFY GKSRTFSSLSDVKC+E+L                 ATISKK G+ S AT + K D
Subjt:  KKGLSKFYNGKSRTFSSLSDVKCIEDL-----------------ATISKKLGKSSFATFLFKAD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTAGGAAGTTGACAGCTGATGCAGATTTTGCTATAACTGTTTTATGTGATCATTGGAACAGAAAAGAAGAGAACAATAAGCCCATTATCCCTCATTTTCAATT
TACTGTGTCATGTTTGGAAGGTTCAACTAGTTCTGTAAACTCCAGTGATGATGGTGACTTATCATCGTATTCATCTTCTTCTTCGTGTTCGTGTTCGTCTGCGTCGTCAG
CATCATCGGCGCCATCTATGTTATCTCGAGCTGAACTCAGCGAGCAACAACCTCCTGTCAAAAAAGGGTTGTCAAAATTTTATAATGGAAAGTCCAGAACCTTCTCGTCT
TTATCAGATGTGAAATGCATAGAGGACTTAGCTACTATTTCAAAAAAGCTTGGAAAGAGCTCTTTTGCAACCTTCCTTTTTAAGGCTGATGATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTAGGAAGTTGACAGCTGATGCAGATTTTGCTATAACTGTTTTATGTGATCATTGGAACAGAAAAGAAGAGAACAATAAGCCCATTATCCCTCATTTTCAATT
TACTGTGTCATGTTTGGAAGGTTCAACTAGTTCTGTAAACTCCAGTGATGATGGTGACTTATCATCGTATTCATCTTCTTCTTCGTGTTCGTGTTCGTCTGCGTCGTCAG
CATCATCGGCGCCATCTATGTTATCTCGAGCTGAACTCAGCGAGCAACAACCTCCTGTCAAAAAAGGGTTGTCAAAATTTTATAATGGAAAGTCCAGAACCTTCTCGTCT
TTATCAGATGTGAAATGCATAGAGGACTTAGCTACTATTTCAAAAAAGCTTGGAAAGAGCTCTTTTGCAACCTTCCTTTTTAAGGCTGATGATTGTTAA
Protein sequenceShow/hide protein sequence
MEFRKLTADADFAITVLCDHWNRKEENNKPIIPHFQFTVSCLEGSTSSVNSSDDGDLSSYSSSSSCSCSSASSASSAPSMLSRAELSEQQPPVKKGLSKFYNGKSRTFSS
LSDVKCIEDLATISKKLGKSSFATFLFKADDC