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Sed0028153 (gene) of Chayote v1 genome

Gene IDSed0028153
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationLG06:172750..173399
RNA-Seq ExpressionSed0028153
SyntenySed0028153
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581780.1 Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3774.78Show/hide
Query:  MGKLTKLKSAIRRWPSISKLSRTTPDVVDDASS-----NLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA
        +GKLTKLKSAI+RWPSISKLSRTT      A++     NLHPVFVGRSRRRYLLSSDVVQHPLFQE++DKSS   +EEG VV+SCEVV+F+HLLWML+NA
Subjt:  MGKLTKLKSAIRRWPSISKLSRTTPDVVDDASS-----NLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA

Query:  ATHLGSAHELVQFYT
         T LGSA ELVQFYT
Subjt:  ATHLGSAHELVQFYT

XP_011651720.1 auxin-responsive protein SAUR78 [Cucumis sativus]1.3e-3670.73Show/hide
Query:  MGKLTKLKSAIRRWPSISKLSRTTPDVVDDASSN-------------LHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDH
        +GKLTKLKSAI+RWPSISKLSR T      A SN             LHPVFVGRSRRRYLLSSDVV HPLFQEL+DKSS   EE+GLV+ SCEVV+F+H
Subjt:  MGKLTKLKSAIRRWPSISKLSRTTPDVVDDASSN-------------LHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDH

Query:  LLWMLQNAATHLGSAHELVQFYT
        LLWML+NAAT LGSA ELVQFYT
Subjt:  LLWMLQNAATHLGSAHELVQFYT

XP_022955880.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]5.8e-3774.78Show/hide
Query:  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA
        +GKLTKLKSAI+RWPSISKLSRTT          D   NLHPVFVGRSRRRYLLSSDVVQHPLFQE++DKSS   +EEG VV+SCEVV+F+HLLWML+NA
Subjt:  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA

Query:  ATHLGSAHELVQFYT
         T LGSA ELVQFYT
Subjt:  ATHLGSAHELVQFYT

XP_022980757.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]3.8e-3673.04Show/hide
Query:  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA
        +GKLTKLKSAI+RWPSISKLSRTT          D   NLHPVFVGRSRRRYLLSSDVVQHPLFQE+++KSS   +E+G VV+SCEVV+F+HLLWML+NA
Subjt:  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA

Query:  ATHLGSAHELVQFYT
         T LGSA ELVQFYT
Subjt:  ATHLGSAHELVQFYT

XP_038901184.1 auxin-responsive protein SAUR78-like [Benincasa hispida]6.4e-3670.49Show/hide
Query:  MGKLTKLKSAIRRWPSISKLSRT-TP-----------DVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHL
        +G+LTKLKSAI+RWPSISKLSRT TP           D  D+ + +LHPVFVGRSRRRYLLSSDVV HPLFQEL+DKSS   +++GLVV SCEVV+F+HL
Subjt:  MGKLTKLKSAIRRWPSISKLSRT-TP-----------DVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHL

Query:  LWMLQNAATHLGSAHELVQFYT
        LWML+NAAT LGSA ELVQFYT
Subjt:  LWMLQNAATHLGSAHELVQFYT

TrEMBL top hitse value%identityAlignment
A0A0A0LBZ7 Uncharacterized protein6.3e-3770.73Show/hide
Query:  MGKLTKLKSAIRRWPSISKLSRTTPDVVDDASSN-------------LHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDH
        +GKLTKLKSAI+RWPSISKLSR T      A SN             LHPVFVGRSRRRYLLSSDVV HPLFQEL+DKSS   EE+GLV+ SCEVV+F+H
Subjt:  MGKLTKLKSAIRRWPSISKLSRTTPDVVDDASSN-------------LHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDH

Query:  LLWMLQNAATHLGSAHELVQFYT
        LLWML+NAAT LGSA ELVQFYT
Subjt:  LLWMLQNAATHLGSAHELVQFYT

A0A1S4E2S4 auxin-responsive protein SAUR71-like7.7e-3566.94Show/hide
Query:  MGKLTKLKSAIRRWPSISKLSRTTPDVV--------------DDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFD
        +GKLTKLKSAI+RWPSISKLSRT                   D+ + +LHPVFVGRSRRRYLLSSDVV HPLFQEL+DKSS   EEE  +V+SCEVV+F+
Subjt:  MGKLTKLKSAIRRWPSISKLSRTTPDVV--------------DDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFD

Query:  HLLWMLQNAATHLGSAHELVQFYT
        HLLWML+NA T LGSA ELVQFYT
Subjt:  HLLWMLQNAATHLGSAHELVQFYT

A0A5D3D6I8 Auxin-responsive protein SAUR71-like7.7e-3566.94Show/hide
Query:  MGKLTKLKSAIRRWPSISKLSRTTPDVV--------------DDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFD
        +GKLTKLKSAI+RWPSISKLSRT                   D+ + +LHPVFVGRSRRRYLLSSDVV HPLFQEL+DKSS   EEE  +V+SCEVV+F+
Subjt:  MGKLTKLKSAIRRWPSISKLSRTTPDVV--------------DDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFD

Query:  HLLWMLQNAATHLGSAHELVQFYT
        HLLWML+NA T LGSA ELVQFYT
Subjt:  HLLWMLQNAATHLGSAHELVQFYT

A0A6J1GWA8 auxin-responsive protein SAUR50-like2.8e-3774.78Show/hide
Query:  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA
        +GKLTKLKSAI+RWPSISKLSRTT          D   NLHPVFVGRSRRRYLLSSDVVQHPLFQE++DKSS   +EEG VV+SCEVV+F+HLLWML+NA
Subjt:  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA

Query:  ATHLGSAHELVQFYT
         T LGSA ELVQFYT
Subjt:  ATHLGSAHELVQFYT

A0A6J1IS54 auxin-responsive protein SAUR50-like1.8e-3673.04Show/hide
Query:  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA
        +GKLTKLKSAI+RWPSISKLSRTT          D   NLHPVFVGRSRRRYLLSSDVVQHPLFQE+++KSS   +E+G VV+SCEVV+F+HLLWML+NA
Subjt:  MGKLTKLKSAIRRWPSISKLSRTT-----PDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNA

Query:  ATHLGSAHELVQFYT
         T LGSA ELVQFYT
Subjt:  ATHLGSAHELVQFYT

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR761.4e-1742.86Show/hide
Query:  KLTKLKSAIRRWPSISKLSRTTPDVVDDA---------SSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQ
        KL KLKS +++  S +      P   + +         S +L  V+VGR+RR Y +SSDVV HPLFQ+L     G   E+G + +SCEVV+F+HLLWML+
Subjt:  KLTKLKSAIRRWPSISKLSRTTPDVVDDA---------SSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQ

Query:  NA---ATHLGSAHELVQFY
        NA    +   S +ELV+FY
Subjt:  NA---ATHLGSAHELVQFY

Q9C9E1 Auxin-responsive protein SAUR785.9e-2450Show/hide
Query:  MGKLTKLKSAIRRWPSISK---LSRTTPDVVDDAS--SNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPE-EEEGLVVLSCEVVMFDHLLWMLQN
        +GKLTKLKSA+++WPS +K    S ++  V D+ S  +NLH V+VG++RR Y+L  D++ HPLFQEL+D+SS    E++  +V++CEVV+F+HLLWML++
Subjt:  MGKLTKLKSAIRRWPSISK---LSRTTPDVVDDAS--SNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPE-EEEGLVVLSCEVVMFDHLLWMLQN

Query:  AATHLGSAHELVQFYT
             GS  EL +FYT
Subjt:  AATHLGSAHELVQFYT

Q9LQI6 Auxin-responsive protein SAUR771.5e-2450Show/hide
Query:  GKLTKLKSAIRRWPSISKLSRTTPDVVDDASS------NLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEE---EGLVVLSCEVVMFDHLLWML
        GKLTKLKSAI++WPS++K   +T      A S      +LH V+VG+SRR Y+LSS V+ HPLFQELLD+SS   EE   +  V+++CEVV+F+HLLWML
Subjt:  GKLTKLKSAIRRWPSISKLSRTTPDVVDDASS------NLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEE---EGLVVLSCEVVMFDHLLWML

Query:  QNAAT--------HLGSAHELVQFYT
        +N+++          GS  EL +FYT
Subjt:  QNAAT--------HLGSAHELVQFYT

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family1.1e-2550Show/hide
Query:  GKLTKLKSAIRRWPSISKLSRTTPDVVDDASS------NLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEE---EGLVVLSCEVVMFDHLLWML
        GKLTKLKSAI++WPS++K   +T      A S      +LH V+VG+SRR Y+LSS V+ HPLFQELLD+SS   EE   +  V+++CEVV+F+HLLWML
Subjt:  GKLTKLKSAIRRWPSISKLSRTTPDVVDDASS------NLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEE---EGLVVLSCEVVMFDHLLWML

Query:  QNAAT--------HLGSAHELVQFYT
        +N+++          GS  EL +FYT
Subjt:  QNAAT--------HLGSAHELVQFYT

AT1G72430.1 SAUR-like auxin-responsive protein family4.2e-2550Show/hide
Query:  MGKLTKLKSAIRRWPSISK---LSRTTPDVVDDAS--SNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPE-EEEGLVVLSCEVVMFDHLLWMLQN
        +GKLTKLKSA+++WPS +K    S ++  V D+ S  +NLH V+VG++RR Y+L  D++ HPLFQEL+D+SS    E++  +V++CEVV+F+HLLWML++
Subjt:  MGKLTKLKSAIRRWPSISK---LSRTTPDVVDDAS--SNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPE-EEEGLVVLSCEVVMFDHLLWMLQN

Query:  AATHLGSAHELVQFYT
             GS  EL +FYT
Subjt:  AATHLGSAHELVQFYT

AT3G12955.1 SAUR-like auxin-responsive protein family1.1e-0937.93Show/hide
Query:  SKLSRTTP-DVVDDASSNLHP-----VFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEG-----LVVLSCEVVMFDHLLWMLQ
        SK +R  P D + D   +  P     V VGR+++ YL+S   ++HPL   L++K    EE++      ++ + CEVV+FDHLLWML+
Subjt:  SKLSRTTP-DVVDDASSNLHP-----VFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEG-----LVVLSCEVVMFDHLLWMLQ

AT5G10990.1 SAUR-like auxin-responsive protein family3.3e-0631.82Show/hide
Query:  LTKLKSAIRRWPSISKLSRTTPDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEE-----EGLVVLSCEVVMFD
        + KL+  +R+W + +++S     V  D  S    V+VGRS RR+++ +  + HP+   LL K+   EEE     +G +V+ CE  +F+
Subjt:  LTKLKSAIRRWPSISKLSRTTPDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEE-----EGLVVLSCEVVMFD

AT5G20820.1 SAUR-like auxin-responsive protein family1.0e-1842.86Show/hide
Query:  KLTKLKSAIRRWPSISKLSRTTPDVVDDA---------SSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQ
        KL KLKS +++  S +      P   + +         S +L  V+VGR+RR Y +SSDVV HPLFQ+L     G   E+G + +SCEVV+F+HLLWML+
Subjt:  KLTKLKSAIRRWPSISKLSRTTPDVVDDA---------SSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQ

Query:  NA---ATHLGSAHELVQFY
        NA    +   S +ELV+FY
Subjt:  NA---ATHLGSAHELVQFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACCACCAAGGTCCAAAAGCAACAAGCCATGGGGAAGCTCACAAAGCTGAAGTCCGCCATAAGACGGTGGCCTTCCATCTCCAAGCTCTCCCGCACCACTCCGGA
CGTCGTCGACGACGCCTCCTCCAACCTCCACCCGGTGTTCGTGGGCAGGTCCCGCCGCCGCTACCTGCTCTCCTCGGACGTGGTCCAACACCCGCTGTTCCAGGAGCTGC
TCGACAAGTCGTCGGGGCCCGAGGAGGAGGAGGGTCTTGTGGTCCTCTCCTGCGAGGTGGTTATGTTCGACCACCTGCTATGGATGCTGCAAAATGCTGCCACTCACTTG
GGCTCCGCACATGAGCTCGTCCAATTCTACACTTAA
mRNA sequenceShow/hide mRNA sequence
GTGCATCTCATGTCCACCACCAAGGTCCAAAAGCAACAAGCCATGGGGAAGCTCACAAAGCTGAAGTCCGCCATAAGACGGTGGCCTTCCATCTCCAAGCTCTCCCGCAC
CACTCCGGACGTCGTCGACGACGCCTCCTCCAACCTCCACCCGGTGTTCGTGGGCAGGTCCCGCCGCCGCTACCTGCTCTCCTCGGACGTGGTCCAACACCCGCTGTTCC
AGGAGCTGCTCGACAAGTCGTCGGGGCCCGAGGAGGAGGAGGGTCTTGTGGTCCTCTCCTGCGAGGTGGTTATGTTCGACCACCTGCTATGGATGCTGCAAAATGCTGCC
ACTCACTTGGGCTCCGCACATGAGCTCGTCCAATTCTACACTTAAATCTTAAAAGCTACGTACTAATTAACCCCCCATTTGATTTTATTATTAATCAATCAAACAGAGAC
TAATTCTCCAAAGGCTTTATTTATATATTGTTTGTTTGTTTGTATAATTACTGTATCTGTGTGTGTGTTCATTTTTCTCCTCAACCTGCAACCAAACACCCTTAGCTAGC
GCTTCTGTGTATTTGTCTTTGTTTTCTTTTGTTACACACAGTGTCAGATCGTACTACTCACATTCTCTGTTTATAATCTTTCTTTCTTTCTTTCTTTCCA
Protein sequenceShow/hide protein sequence
MSTTKVQKQQAMGKLTKLKSAIRRWPSISKLSRTTPDVVDDASSNLHPVFVGRSRRRYLLSSDVVQHPLFQELLDKSSGPEEEEGLVVLSCEVVMFDHLLWMLQNAATHL
GSAHELVQFYT