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Sed0028156 (gene) of Chayote v1 genome

Gene IDSed0028156
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich protein-like
Genome locationLG01:23377435..23377893
RNA-Seq ExpressionSed0028156
SyntenySed0028156
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136254.1 glycine-rich protein 3 short isoform-like [Momordica charantia]3.6e-1547.24Show/hide
Query:  MSSKAFIFLGLLFVLITLSSKQVIATARDLNNETIMETNGDVFEDVKQHHHGHGHGH-----------------------------------RRHCHHGC
        M+SKAFI LGLLF ++ L S  V  TARDL  ET+MET+G   ED K   +  GHGH                                    RHCHHGC
Subjt:  MSSKAFIFLGLLFVLITLSSKQVIATARDLNNETIMETNGDVFEDVKQHHHGHGHGH-----------------------------------RRHCHHGC

Query:  CGHHHGGCSRCCSFAGEAVDEEPQAKP
        CG +HG C RCCS+AGEAVD EPQAKP
Subjt:  CGHHHGGCSRCCSFAGEAVDEEPQAKP

XP_023529828.1 glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo]1.3e-0949.52Show/hide
Query:  MSSKAFIFLGLLF-VLITLSSKQVIATARDLNN--ETIMETNGDVFEDVK----------QHHHGHGHGHRRHCHHGCCGHHHGGCSRCCSFAGEAVDEE
        M+SKAFI LGLLF V+I LSS++  ATAR L +  E +METNGD  ED K          +HHH H H HR HC HGC              A E V+E+
Subjt:  MSSKAFIFLGLLF-VLITLSSKQVIATARDLNN--ETIMETNGDVFEDVK----------QHHHGHGHGHRRHCHHGCCGHHHGGCSRCCSFAGEAVDEE

Query:  PQAKP
        PQAKP
Subjt:  PQAKP

XP_038888333.1 glycine-rich protein-like isoform X1 [Benincasa hispida]2.2e-1254.08Show/hide
Query:  MSSKAFIFLGLLFVLITL-SSKQVIATARDLNNETIMETNGDVFEDVKQHHHGHGHGHR-----RHCHHGCCGHHHGGCSRCCSFAGEAVDEEPQAKP
        MSSKAFIFLGLLF ++ L SS++V   ARD+  E  M   G+V +DV++H  G GH          C+HGCC    G C RCCSFAGEAVD +PQAKP
Subjt:  MSSKAFIFLGLLFVLITL-SSKQVIATARDLNNETIMETNGDVFEDVKQHHHGHGHGHR-----RHCHHGCCGHHHGGCSRCCSFAGEAVDEEPQAKP

XP_038888334.1 glycine-rich protein-like isoform X2 [Benincasa hispida]5.8e-1356.12Show/hide
Query:  MSSKAFIFLGLLFVLITL-SSKQVIATARDLNNETIMETNGDVFEDVKQHHHGHGHGHR-----RHCHHGCCGHHHGGCSRCCSFAGEAVDEEPQAKP
        MSSKAFIFLGLLF ++ L SS++V   ARD+  E +MET G+V +DV++H  G GH          C+HGCC    G C RCCSFAGEAVD +PQAKP
Subjt:  MSSKAFIFLGLLFVLITL-SSKQVIATARDLNNETIMETNGDVFEDVKQHHHGHGHGHR-----RHCHHGCCGHHHGGCSRCCSFAGEAVDEEPQAKP

XP_038888674.1 glycine-rich protein-like [Benincasa hispida]8.4e-2068.48Show/hide
Query:  MSSKAFIFLGLLFVLIT-LSSKQVIATARDLNN--ETIMETNGDVFEDVKQHHHGHGHGHRRHCHHGCCGHHH-GGCSRCCSFAGEAVDEEP
        MSSKAFIFLG LFV++  LSS++V A A DL +  + +METNG  FEDVK+      HGH RHCHHGCCGHHH GGCSRCCSFAGEAVD EP
Subjt:  MSSKAFIFLGLLFVLIT-LSSKQVIATARDLNN--ETIMETNGDVFEDVKQHHHGHGHGHRRHCHHGCCGHHH-GGCSRCCSFAGEAVDEEP

TrEMBL top hitse value%identityAlignment
A0A0A0K5A1 Uncharacterized protein2.1e-0849Show/hide
Query:  MSSKAFIFLGLLFVLITLSSKQVIATARDLN-NETIMETNGDVFEDVKQHHHGHGHGHR-----RHCHHGCCGHHHGGCSRCCSFAGEA--VDEEPQAKP
        MSSK+FI LGLLF ++  SS+ +  TARD    E  MET G+V ++V++H +G  H          C+ GCC    G C RCCSFAGEA  VD +PQAKP
Subjt:  MSSKAFIFLGLLFVLITLSSKQVIATARDLN-NETIMETNGDVFEDVKQHHHGHGHGHR-----RHCHHGCCGHHHGGCSRCCSFAGEA--VDEEPQAKP

A0A6J1C3E0 glycine-rich protein DC7.1-like1.2e-0856.12Show/hide
Query:  MSSKAFIFLGLLF-VLITLSSKQVIATARDLNN--ETIMETNGDVFEDVKQHHHGHGHGHRRHCHHGCCGHHHGGCSRCCSFA--GEAVD-EEPQAKP
        MSSK  IFLGLLF V++ LSS++V ATARDL +  E + ETN  + ED K+ HHGH H HRR  H   C HHH      CSFA   EAVD EE Q KP
Subjt:  MSSKAFIFLGLLF-VLITLSSKQVIATARDLNN--ETIMETNGDVFEDVKQHHHGHGHGHRRHCHHGCCGHHHGGCSRCCSFA--GEAVD-EEPQAKP

A0A6J1C3T3 glycine-rich protein 3 short isoform-like1.8e-1547.24Show/hide
Query:  MSSKAFIFLGLLFVLITLSSKQVIATARDLNNETIMETNGDVFEDVKQHHHGHGHGH-----------------------------------RRHCHHGC
        M+SKAFI LGLLF ++ L S  V  TARDL  ET+MET+G   ED K   +  GHGH                                    RHCHHGC
Subjt:  MSSKAFIFLGLLFVLITLSSKQVIATARDLNNETIMETNGDVFEDVKQHHHGHGHGH-----------------------------------RRHCHHGC

Query:  CGHHHGGCSRCCSFAGEAVDEEPQAKP
        CG +HG C RCCS+AGEAVD EPQAKP
Subjt:  CGHHHGGCSRCCSFAGEAVDEEPQAKP

A0A6J1ESD5 glycine-rich protein DC7.1-like8.5e-1048.57Show/hide
Query:  MSSKAFIFLGLLF-VLITLSSKQVIATARDLNN--ETIMETNGDVFEDVK----------QHHHGHGHGHRRHCHHGCCGHHHGGCSRCCSFAGEAVDEE
        M+SKAFI LGLLF ++I LSS++  ATAR L +  E +METNGD  ED K          +HHH H H HR HC HGC              A E V+E+
Subjt:  MSSKAFIFLGLLF-VLITLSSKQVIATARDLNN--ETIMETNGDVFEDVK----------QHHHGHGHGHRRHCHHGCCGHHHGGCSRCCSFAGEAVDEE

Query:  PQAKP
        PQAKP
Subjt:  PQAKP

A0A6J1JMI7 glycine-rich protein DC7.1-like9.4e-0954.74Show/hide
Query:  MSSKAFIFLGLLF-VLITLSSKQVIATARDLNN--ETIMETNGDVFEDVKQHHHGHGHGHRRHCHHGCCGHHHGGCSRCCSFAGEAVDEEPQAKP
        M+SKAFI LGLLF V+I LSS++  ATAR L +  E +METNGD  ED K+   G  HGH+ H H     HHH  C   CS A E V+E+PQAKP
Subjt:  MSSKAFIFLGLLF-VLITLSSKQVIATARDLNN--ETIMETNGDVFEDVKQHHHGHGHGHRRHCHHGCCGHHHGGCSRCCSFAGEAVDEEPQAKP

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein5.5e-0637.38Show/hide
Query:  MSSKAFIFLGLLFVLITLSSKQVIA-------TARDLNNETIMETNG-DVFEDV-KQHHHGHGHGH------RRHCHHGCCGHHHGGCSRCCSFAGEAVD
        M SKAF+FLGL      L S +V+A           L+ E  ++ +G   + DV    ++G G G       RR C +GCC   + GC RCCS+AGEA+D
Subjt:  MSSKAFIFLGLLFVLITLSSKQVIA-------TARDLNNETIMETNG-DVFEDV-KQHHHGHGHGH------RRHCHHGCCGHHHGGCSRCCSFAGEAVD

Query:  EEPQAKP
        +  +A+P
Subjt:  EEPQAKP

Arabidopsis top hitse value%identityAlignment
AT2G05380.1 glycine-rich protein 3 short isoform4.0e-0431.86Show/hide
Query:  MSSKAFIFLGLLFVLITLSSKQVIATARDLNNETIM-ETNGDVFEDVKQHHHGHGHGHRRH-------------------------CHHGCCGHHHGGCS
        M+SK  + LGL   L  +S      T +  + ET+  E +G  F D     +  G GH  H                         C HGCC   + GCS
Subjt:  MSSKAFIFLGLLFVLITLSSKQVIATARDLNNETIM-ETNGDVFEDVKQHHHGHGHGHRRH-------------------------CHHGCCGHHHGGCS

Query:  RCCSFAGEAVDEE
        RCCS+AGEAV  +
Subjt:  RCCSFAGEAVDEE

AT2G05380.2 glycine-rich protein 3 short isoform1.8e-0434.34Show/hide
Query:  MSSKAFIFLGLLFVLITLSSKQVIATARDLNNETIM-ETNGDVFEDVKQHHHGHGHGHRR-----------HCHHGCCGHHHGGCSRCCSFAGEAVDEE
        M+SK  + LGL   L  +S      T +  + ET+  E +G  F D     +  G G  +           +C HGCC   + GCSRCCS+AGEAV  +
Subjt:  MSSKAFIFLGLLFVLITLSSKQVIATARDLNNETIM-ETNGDVFEDVKQHHHGHGHGHRR-----------HCHHGCCGHHHGGCSRCCSFAGEAVDEE

AT2G05520.5 glycine-rich protein 38.1e-0534.86Show/hide
Query:  MSSKAFIFLGLLFVLITLSSKQVI--ATARDLNNETIME------TNGDVFEDVKQHHHG-----HGHGHRR--------HCHHGCCGHHHGGCSRCCSF
        M+SKA + LGL  VL+ +S       AT    + ET+         NG  + +    + G      G G R+        +C HGCC   + GCSRCCS+
Subjt:  MSSKAFIFLGLLFVLITLSSKQVI--ATARDLNNETIME------TNGDVFEDVKQHHHG-----HGHGHRR--------HCHHGCCGHHHGGCSRCCSF

Query:  AGEAVDEEP
        AGEAV  +P
Subjt:  AGEAVDEEP

AT2G05520.6 glycine-rich protein 32.4e-0433.04Show/hide
Query:  MSSKAFIFLGLLFVLITLSSKQVI--ATARDLNNETIME------------TNGDVFEDVKQHHHG-----HGHGHRR--------HCHHGCCGHHHGGC
        M+SKA + LGL  VL+ +S       AT    + ET+               NG  ++    ++ G      G G R+        +C HGCC   + GC
Subjt:  MSSKAFIFLGLLFVLITLSSKQVI--ATARDLNNETIME------------TNGDVFEDVKQHHHG-----HGHGHRR--------HCHHGCCGHHHGGC

Query:  SRCCSFAGEAVDEEP
        SRCCS+AGEAV  +P
Subjt:  SRCCSFAGEAVDEEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAAGCTTTCATCTTCCTCGGCCTCCTTTTCGTTCTCATCACCCTCTCTTCAAAACAAGTTATTGCTACTGCAAGAGACCTCAACAACGAAACCATTATGGA
GACTAATGGAGATGTGTTCGAGGACGTCAAACAACATCACCACGGACATGGGCATGGACACCGACGCCATTGCCACCACGGATGCTGCGGTCACCACCATGGCGGTTGCA
GTAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGAAGAACCCCAAGCCAAGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAAGCTTTCATCTTCCTCGGCCTCCTTTTCGTTCTCATCACCCTCTCTTCAAAACAAGTTATTGCTACTGCAAGAGACCTCAACAACGAAACCATTATGGA
GACTAATGGAGATGTGTTCGAGGACGTCAAACAACATCACCACGGACATGGGCATGGACACCGACGCCATTGCCACCACGGATGCTGCGGTCACCACCATGGCGGTTGCA
GTAGGTGCTGCAGCTTTGCTGGTGAGGCTGTTGATGAAGAACCCCAAGCCAAGCCCTAG
Protein sequenceShow/hide protein sequence
MSSKAFIFLGLLFVLITLSSKQVIATARDLNNETIMETNGDVFEDVKQHHHGHGHGHRRHCHHGCCGHHHGGCSRCCSFAGEAVDEEPQAKP