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Sed0028187 (gene) of Chayote v1 genome

Gene IDSed0028187
OrganismSechium edule (Chayote v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR13
Genome locationLG08:19980749..19981150
RNA-Seq ExpressionSed0028187
SyntenySed0028187
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590203.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2157.89Show/hide
Query:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTES--SSASPSSDFEECWCTPKADRFQIPKLKICP
        MASKGG  + K K     T  TQLKK +K KKMK    +Q +R+  + TK TEEI+ SSS AMA   +   SAS SSDFEEC  TPKA+RF+IP++KICP
Subjt:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTES--SSASPSSDFEECWCTPKADRFQIPKLKICP

Query:  PAPIKQRLFPNCSLQRSSPIALFASPDIDLFFF
        PAP KQR+  NCS Q+ SPI+ FASPDI++FFF
Subjt:  PAPIKQRLFPNCSLQRSSPIALFASPDIDLFFF

KAG7022087.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2156.93Show/hide
Query:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQN---IRTKITEEIQ---ASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKL
        MASKGGRT+R   PT           KK KKK+K + NN GRR +    + +KI EEI+   ASSSSAMA  +  ++  SSDFE C  TPKADRF+IP++
Subjt:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQN---IRTKITEEIQ---ASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKL

Query:  KICPPAPIKQRLFPNCSLQRSSPIALFASPDIDLFFF
        +ICPPAP KQR   NCSLQ+ SPIA FASPDI+LFFF
Subjt:  KICPPAPIKQRLFPNCSLQRSSPIALFASPDIDLFFF

KGN66487.1 hypothetical protein Csa_006949 [Cucumis sativus]1.3e-1651.05Show/hide
Query:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVT--ESSSASPSSDF------EECWCTPKADRFQIP
        MASK G  +R+ +     TTTTQLK KK KK +K N         NI+ +  EEI+  +SS+  +   E S +  S DF      EEC  TPKA+RF+IP
Subjt:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVT--ESSSASPSSDF------EECWCTPKADRFQIP

Query:  KLKICPPAPIKQRLF----PNCSLQRSSPIALFASPDIDLFFF
        ++KICPPAP K+RLF     NCSLQR SPIA FASPDI+LFFF
Subjt:  KLKICPPAPIKQRLF----PNCSLQRSSPIALFASPDIDLFFF

XP_022154348.1 cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia]3.7e-1652.63Show/hide
Query:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQ-ASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPP
        MASKGG  + K K       + ++KKK  ++  K N        +N  T+    ++ ASSS+AMA  ES     SSD EEC CTPKA+RF+IP++KICPP
Subjt:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQ-ASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPP

Query:  APIKQRLFPNCS-LQRSSPIALFASPDIDLFFF
        AP KQR+F NCS LQR SPIA FASPDI+LFFF
Subjt:  APIKQRLFPNCS-LQRSSPIALFASPDIDLFFF

XP_023530358.1 cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo]1.7e-2158.09Show/hide
Query:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNI--RTKITEEIQ---ASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLK
        MASKGGRT+R   P      T  LKK KKK K   NN  + RR + I   +KI EEI+   ASSSSAMA  +  ++  SSDFE C  TPKADRF+IP+++
Subjt:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNI--RTKITEEIQ---ASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLK

Query:  ICPPAPIKQRLFPNCSLQRSSPIALFASPDIDLFFF
        ICPPAP KQR   NCSLQ+ SPIA FASPDI+LFFF
Subjt:  ICPPAPIKQRLFPNCSLQRSSPIALFASPDIDLFFF

TrEMBL top hitse value%identityAlignment
A0A0A0M041 Uncharacterized protein6.1e-1751.05Show/hide
Query:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVT--ESSSASPSSDF------EECWCTPKADRFQIP
        MASK G  +R+ +     TTTTQLK KK KK +K N         NI+ +  EEI+  +SS+  +   E S +  S DF      EEC  TPKA+RF+IP
Subjt:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVT--ESSSASPSSDF------EECWCTPKADRFQIP

Query:  KLKICPPAPIKQRLF----PNCSLQRSSPIALFASPDIDLFFF
        ++KICPPAP K+RLF     NCSLQR SPIA FASPDI+LFFF
Subjt:  KLKICPPAPIKQRLF----PNCSLQRSSPIALFASPDIDLFFF

A0A200QIA8 Uncharacterized protein1.8e-0840.52Show/hide
Query:  TTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFPNCSLQRSS
        TTTTTT           K+ NN    + ++I   I  +I A++                     +CTPKA RFQIPK++ CPPAP KQRL   CS    +
Subjt:  TTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFPNCSLQRSS

Query:  PIALFASPDIDLFFFS
        PI  FASPDI+LFF+S
Subjt:  PIALFASPDIDLFFFS

A0A445FGG2 Cyclin-dependent protein kinase inhibitor SMR133.0e-0842.15Show/hide
Query:  TTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSA----MAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFPNCS
        +T+TT T++K +K K+           + Q   T+  E    SSSS+    +   E  S +          TPKA RF+IP+++ CPPAP K+R+ PNCS
Subjt:  TTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSA----MAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFPNCS

Query:  LQRSSPIALFASPDIDLFFFS
         +R SPIA FASPDI+LFFFS
Subjt:  LQRSSPIALFASPDIDLFFFS

A0A6J1DK32 cyclin-dependent protein kinase inhibitor SMR9-like1.8e-1652.63Show/hide
Query:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQ-ASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPP
        MASKGG  + K K       + ++KKK  ++  K N        +N  T+    ++ ASSS+AMA  ES     SSD EEC CTPKA+RF+IP++KICPP
Subjt:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQ-ASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPP

Query:  APIKQRLFPNCS-LQRSSPIALFASPDIDLFFF
        AP KQR+F NCS LQR SPIA FASPDI+LFFF
Subjt:  APIKQRLFPNCS-LQRSSPIALFASPDIDLFFF

K7MYD2 Uncharacterized protein3.0e-0841.94Show/hide
Query:  KPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSA----MAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFP
        K  +T+TT T++K +K K+           + Q   T+  E    SSSS+    +   E  S +          TPKA RF+IP+++ CPPAP K+R+ P
Subjt:  KPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSA----MAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFP

Query:  NCSLQRSSPIALFASPDIDLFFFS
        NCS +R SPIA FASPDI+LFFFS
Subjt:  NCSLQRSSPIALFASPDIDLFFFS

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR133.0e-0534.65Show/hide
Query:  KKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFPNCSLQRSSPIALFASPDIDLF
        KK  K N   +       + ++ +    ++++  +V   S A+  +    C CTPKA + +IP++  CPPAP KQR+  NC L+R   I  FA P+I+LF
Subjt:  KKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFPNCSLQRSSPIALFASPDIDLF

Query:  F
        F
Subjt:  F

Q3ECS5 Cyclin-dependent protein kinase inhibitor SMR92.7e-0635.38Show/hide
Query:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPA
        MASKG      +KP   TTT       +++K+    N +           I  ++ ++SS++ + T +++ SP S    C CTP+  R  IP++  CPPA
Subjt:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPA

Query:  PIKQRLFPNCSLQRSSPIALFASPDIDLFF
        P KQ++  NC+L+R   IA FA PD++LFF
Subjt:  PIKQRLFPNCSLQRSSPIALFASPDIDLFF

Arabidopsis top hitse value%identityAlignment
AT1G51355.1 unknown protein1.9e-0735.38Show/hide
Query:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPA
        MASKG      +KP   TTT       +++K+    N +           I  ++ ++SS++ + T +++ SP S    C CTP+  R  IP++  CPPA
Subjt:  MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPA

Query:  PIKQRLFPNCSLQRSSPIALFASPDIDLFF
        P KQ++  NC+L+R   IA FA PD++LFF
Subjt:  PIKQRLFPNCSLQRSSPIALFASPDIDLFF

AT3G20898.1 unknown protein2.1e-0634.65Show/hide
Query:  KKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFPNCSLQRSSPIALFASPDIDLF
        KK  K N   +       + ++ +    ++++  +V   S A+  +    C CTPKA + +IP++  CPPAP KQR+  NC L+R   I  FA P+I+LF
Subjt:  KKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFPNCSLQRSSPIALFASPDIDLF

Query:  F
        F
Subjt:  F


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTAAAGGAGGAAGAACAAAAAGAAAAAGAAAGCCAACAACAACAACAACAACAACAACCCAATTGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGATCAACAA
CAACAATCAAGGTAGAAGGCTTCAAAATATCAGAACTAAAATAACAGAGGAAATTCAAGCTTCAAGCTCCTCTGCCATGGCTGTCACTGAATCATCATCAGCTTCACCAA
GCTCTGATTTTGAAGAGTGCTGGTGTACTCCTAAAGCAGATAGATTTCAAATCCCAAAGCTCAAAATTTGCCCTCCAGCTCCTATAAAACAAAGGCTCTTTCCAAATTGT
TCTTTACAAAGATCTTCTCCAATTGCTCTCTTTGCTTCACCAGACATCGACCTTTTCTTCTTCTCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTAAAGGAGGAAGAACAAAAAGAAAAAGAAAGCCAACAACAACAACAACAACAACAACCCAATTGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGATCAACAA
CAACAATCAAGGTAGAAGGCTTCAAAATATCAGAACTAAAATAACAGAGGAAATTCAAGCTTCAAGCTCCTCTGCCATGGCTGTCACTGAATCATCATCAGCTTCACCAA
GCTCTGATTTTGAAGAGTGCTGGTGTACTCCTAAAGCAGATAGATTTCAAATCCCAAAGCTCAAAATTTGCCCTCCAGCTCCTATAAAACAAAGGCTCTTTCCAAATTGT
TCTTTACAAAGATCTTCTCCAATTGCTCTCTTTGCTTCACCAGACATCGACCTTTTCTTCTTCTCACAATGA
Protein sequenceShow/hide protein sequence
MASKGGRTKRKRKPTTTTTTTTQLKKKKKKKKMKINNNNQGRRLQNIRTKITEEIQASSSSAMAVTESSSASPSSDFEECWCTPKADRFQIPKLKICPPAPIKQRLFPNC
SLQRSSPIALFASPDIDLFFFSQ