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Sed0028193 (gene) of Chayote v1 genome

Gene IDSed0028193
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG04:43011143..43011556
RNA-Seq ExpressionSed0028193
SyntenySed0028193
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647336.1 hypothetical protein Csa_003380 [Cucumis sativus]1.7e-5383.94Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        MSVEILDSATIVNFVED+VAFGAFIRD+FA LDTN DGLLSYS+ML+EL  LRV ET F IDVK  PDELSSVYSSLFLQFDRDS+G VDLDEF+AE +R
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANG+G  PVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIMAA

XP_022930659.1 uncharacterized protein LOC111437060 [Cucurbita moschata]1.0e-5385.19Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        MSVEILDSATIVNFVEDE AFGA I D+FA LDTNHDGLLS+S+MLKELQ LRVIE  F IDVK  PDELSSVYSS+FLQFDR+S+G VDLDEFKAEN+R
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIM
        MMLAMANGIGA PVQMVLEEGSFLMKAVERE AIM
Subjt:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIM

XP_022989004.1 uncharacterized protein LOC111486198 [Cucurbita maxima]4.1e-5586.67Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        MSVEILDSATIVNFVEDE AFGAFI D+FA LDTNHDGLLSYS+MLKELQ LRVIE  F IDVK  PDELSSVYSS+FLQFDR+S+G VDLDEFKAEN+R
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIM
        MMLAMANGIGA PVQMVLEEGSFLMKAVERE AIM
Subjt:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIM

XP_023529816.1 uncharacterized protein LOC111792530 [Cucurbita pepo subsp. pepo]3.5e-5485.93Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        MSVEILDSATIVNFVEDE AFGA I D+FA LDTNHDGLLSYS+MLKELQ LRVIE  F IDVK  PDELSSVYSS+FLQFDR+S+G VDLDEFKAEN+R
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIM
        MMLAMANGIGA PVQMVLEEGSFLMKAVERE AIM
Subjt:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIM

XP_038888297.1 uncharacterized protein LOC120078146 [Benincasa hispida]1.0e-5383.94Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        MSVEILDSATIVNFVED+VAFGAFIRD+FA LDTNHDGLLSY++ML+EL  LRV ET F IDVK  PDELSSVYSSLFLQFDRDS+G VDLDEF AE +R
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIMAA
        MML MANG+G  PVQMVLEEGSFLMKAVERETAIMAA
Subjt:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIMAA

TrEMBL top hitse value%identityAlignment
A0A0A0KHT7 Uncharacterized protein8.4e-5483.94Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        MSVEILDSATIVNFVED+VAFGAFIRD+FA LDTN DGLLSYS+ML+EL  LRV ET F IDVK  PDELSSVYSSLFLQFDRDS+G VDLDEF+AE +R
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIMAA
        MMLAMANG+G  PVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIMAA

A0A1S3BLY5 uncharacterized protein LOC1034912942.4e-5383.21Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        MSVEILDSATIVNFVED+VAFGAFIRD+FA LDTNHDGLLSYS+ML+EL  LRV ET F IDVK  P+ELSSVYSSLFLQFD DS+G VDLDEFKAE +R
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIMAA
        MML MANG+G  PVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIMAA

A0A5D3E445 Calcium-binding EF-hand family protein2.4e-5383.21Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        MSVEILDSATIVNFVED+VAFGAFIRD+FA LDTNHDGLLSYS+ML+EL  LRV ET F IDVK  P+ELSSVYSSLFLQFD DS+G VDLDEFKAE +R
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIMAA
        MML MANG+G  PVQMVLEEGSFLMKAVERETAI AA
Subjt:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIMAA

A0A6J1ES35 uncharacterized protein LOC1114370604.9e-5485.19Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        MSVEILDSATIVNFVEDE AFGA I D+FA LDTNHDGLLS+S+MLKELQ LRVIE  F IDVK  PDELSSVYSS+FLQFDR+S+G VDLDEFKAEN+R
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIM
        MMLAMANGIGA PVQMVLEEGSFLMKAVERE AIM
Subjt:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIM

A0A6J1JN55 uncharacterized protein LOC1114861982.0e-5586.67Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        MSVEILDSATIVNFVEDE AFGAFI D+FA LDTNHDGLLSYS+MLKELQ LRVIE  F IDVK  PDELSSVYSS+FLQFDR+S+G VDLDEFKAEN+R
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIM
        MMLAMANGIGA PVQMVLEEGSFLMKAVERE AIM
Subjt:  MMLAMANGIGASPVQMVLEEGSFLMKAVERETAIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.2e-0931.01Show/hide
Query:  ILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHP-DELSSVYSSLFLQFDRDSNGAVDLDEFKAENRRMML
        ++ S T++ F+ D  +F +   D F  LD + +G+LS S++ + L  +  +E+      ++ P DE  +VY+++F +F  D    +    F+     ++ 
Subjt:  ILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHP-DELSSVYSSLFLQFDRDSNGAVDLDEFKAENRRMML

Query:  AMANGIGASPVQMVLEEGSFLMKAVERET
        AMA GIG SPV MV+     +MKAV  E+
Subjt:  AMANGIGASPVQMVLEEGSFLMKAVERET

AT2G44310.1 Calcium-binding EF-hand family protein1.5e-2640.74Show/hide
Query:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR
        M V ++D +T+ +FV+DE  F   + ++FA LD N DG+LS S++ K  + +R++E+ F +DV    DEL+++Y S+F +FD D +G+VDL+EF++E ++
Subjt:  MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRR

Query:  MMLAMANGIGASPVQMVL--EEGSFLMKAVERETA
        ++LA+A+G+G+ P+ MVL  ++ +FL KA + E +
Subjt:  MMLAMANGIGASPVQMVL--EEGSFLMKAVERETA

AT4G38810.2 Calcium-binding EF-hand family protein3.4e-0726.4Show/hide
Query:  EILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRRMML
        ++LD + IV  VE+E  F  F+  +F +LD + DG LS +++      +  I     +  +    +   +YS +  +F   S   V   EFK     ++L
Subjt:  EILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRRMML

Query:  AMANGIGASPVQMVLEEGSFLMKAV
         MA G+   P+ ++  +G  L + V
Subjt:  AMANGIGASPVQMVLEEGSFLMKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGAGATATTGGACAGTGCCACCATTGTCAACTTCGTCGAAGACGAGGTAGCTTTTGGTGCCTTCATAAGAGACCAGTTTGCTCGTCTCGACACTAACCATGA
TGGTCTCCTTTCCTACAGCGACATGTTGAAGGAGTTGCAATGCCTCAGGGTCATCGAGACCGGTTTCGAGATTGATGTGAAACTTCATCCTGATGAGCTTTCTTCTGTGT
ATAGTTCTCTGTTTTTGCAGTTTGATCGTGACTCGAATGGAGCGGTTGATCTCGATGAGTTTAAGGCTGAGAACAGAAGGATGATGCTAGCTATGGCTAATGGGATTGGA
GCCTCGCCGGTTCAGATGGTGCTTGAAGAGGGGAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACTGCAATTATGGCCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGAGATATTGGACAGTGCCACCATTGTCAACTTCGTCGAAGACGAGGTAGCTTTTGGTGCCTTCATAAGAGACCAGTTTGCTCGTCTCGACACTAACCATGA
TGGTCTCCTTTCCTACAGCGACATGTTGAAGGAGTTGCAATGCCTCAGGGTCATCGAGACCGGTTTCGAGATTGATGTGAAACTTCATCCTGATGAGCTTTCTTCTGTGT
ATAGTTCTCTGTTTTTGCAGTTTGATCGTGACTCGAATGGAGCGGTTGATCTCGATGAGTTTAAGGCTGAGAACAGAAGGATGATGCTAGCTATGGCTAATGGGATTGGA
GCCTCGCCGGTTCAGATGGTGCTTGAAGAGGGGAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACTGCAATTATGGCCGCTTGA
Protein sequenceShow/hide protein sequence
MSVEILDSATIVNFVEDEVAFGAFIRDQFARLDTNHDGLLSYSDMLKELQCLRVIETGFEIDVKLHPDELSSVYSSLFLQFDRDSNGAVDLDEFKAENRRMMLAMANGIG
ASPVQMVLEEGSFLMKAVERETAIMAA