CuGenDBv2

Gene ID	Sed0028200
Organism	Sechium edule (Chayote v1)
Description	RAB GTPase homolog C2A
Genome location	LG02:43849363..43852504
RNA-Seq Expression	Sed0028200
Synteny	Sed0028200
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0012505 - endomembrane system (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR001806 - Small GTPase IPR005225 - Small GTP-binding protein domain IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596496.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-80

93.94

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVW+KEVELYSTNK+CVKMLIGNKVDRESERAVSREEGIA
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL
        L+ ELGSFFLECSAKTRENVEKCFE+LALKIMEAPSLIEEGSTVVKRNILKQQE Q A T+SCCL
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL

XP_004137847.1 ras-related protein RABC2a [Cucumis sativus]

2.1e-80

93.94

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Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIKLL+VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF NLSDVW+KEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL
        L+  LGS+FLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQ AST+SCCL
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL

XP_022934198.1 ras-related protein RABC2a-like [Cucurbita moschata]

8.0e-80

92.73

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Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIKLL+VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF+NLSDVW+KEVELYSTNKDCVKMLIGNKVDRESERAVSREEG A
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL
        L+ ELGS FLECSAKTRENVEKCFE+LALKIMEAPSLIE+GSTVVKRNILKQQEFQAAST+ CCL
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL

XP_022936998.1 ras-related protein RABC2a-like [Cucurbita moschata]

1.2e-80

93.94

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVW+KEVELYSTNK+CVKMLIGNKVDRESERAVSREEGIA
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL
        L+ ELGSFFLECSAKTRENVEKCFE+LALKIMEAPSLIEEGSTVVKRNILKQQE Q A T+SCCL
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL

XP_023005146.1 ras-related protein RABC2a-like [Cucurbita maxima]

1.2e-80

93.94

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVW+KEVELYSTNK+CVKMLIGNKVDRESERAVSREEGIA
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL
        L+ ELGSFFLECSAKTRENVEKCFE+LALKIMEAPSLIEEGSTVVKRNILKQQE Q A T+SCCL
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGE4 Uncharacterized protein

1.0e-80

93.94

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIKLL+VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF NLSDVW+KEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL
        L+  LGS+FLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQ AST+SCCL
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL

A0A5A7TKX7 Ras-related protein RABC2a

1.1e-79

93.33

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Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIKLL+VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF NLSDVW+KEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL
        L+  LGS FLECSAKTRENVEKCFE+LALKIMEAPSLIEEGSTVVKRNILKQQEFQ AST+SCCL
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL

A0A6J1F705 ras-related protein RABC2a-like

3.9e-80

92.73

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Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIKLL+VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF+NLSDVW+KEVELYSTNKDCVKMLIGNKVDRESERAVSREEG A
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL
        L+ ELGS FLECSAKTRENVEKCFE+LALKIMEAPSLIE+GSTVVKRNILKQQEFQAAST+ CCL
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL

A0A6J1FET8 ras-related protein RABC2a-like

6.0e-81

93.94

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVW+KEVELYSTNK+CVKMLIGNKVDRESERAVSREEGIA
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL
        L+ ELGSFFLECSAKTRENVEKCFE+LALKIMEAPSLIEEGSTVVKRNILKQQE Q A T+SCCL
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL

A0A6J1KU45 ras-related protein RABC2a-like

6.0e-81

93.94

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Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVW+KEVELYSTNK+CVKMLIGNKVDRESERAVSREEGIA
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL
        L+ ELGSFFLECSAKTRENVEKCFE+LALKIMEAPSLIEEGSTVVKRNILKQQE Q A T+SCCL
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSSCCL

SwissProt top hits

e value

%identity

Alignment

O23657 Ras-related protein RABC1

3.8e-64

71.08

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFK+K L +G K+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TF NLSD+W+KE++LYSTN+DC+KML+GNKVD+ESERAVS++EGI 
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSS--CC
         + E G  FLECSAKTR NVE+CFE+L LKI+E PSL  EGS+  K+NI KQ   Q  STSS  CC
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSS--CC

O49841 Ras-related protein RABC2a

1.2e-70

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Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIK L VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF NL DVW KE+ELYSTN++CV+ML+GNKVDRESER VSREEGIA
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQ-EFQAASTSSCC
        L+ EL   FLECSA+TR+NVE+CFE+LALKIME PSL+EEGS+ VKRNILKQ+ E Q  + S CC
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQ-EFQAASTSSCC

P36862 GTP-binding protein yptV3

4.9e-40

57.55

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFK+K L   GKR KLTIWDTAGQERFRTLTSSYYRGAQGII VYDVTRR+TF++L   W +E ++YST +  +KM++ NKVD  ++R VS EEG  
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIE
         +   G  F+E SA+    V + FE+L LKI++ P L+E
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIE

Q6DHC1 Ras-related protein Rab-18-B

9.3e-39

56.12

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFK+K + + G R KL IWDTAGQERFRTLT SYYRGAQG+ILVYDVT+R+TF  L + W  E+E Y T  D VKML+GNK+D+++ R V R EG+ 
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIE
         + +    F+E SAKTR+ V+  FE+L  KI++ P L E
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIE

Q9SF92 Ras-related protein RABC2b

1.0e-61

76.87

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Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIK ++V GKRLKLTIWDTAGQE+FRTLTSSY+RG+QGIILVYDVT+RETF NL+D+W+KE+ELYSTN DC+KML+GNKVDRESER VSREEG+A
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKR
        L+ +L   F ECSA+TRENV  CFE+LALKIME PSL+EEGS+ VKR
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKR

Arabidopsis top hits

e value

%identity

Alignment

AT1G43890.1 RAB GTPASE HOMOLOG B18

2.7e-65

71.08

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFK+K L +G K+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TF NLSD+W+KE++LYSTN+DC+KML+GNKVD+ESERAVS++EGI 
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSS--CC
         + E G  FLECSAKTR NVE+CFE+L LKI+E PSL  EGS+  K+NI KQ   Q  STSS  CC
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSS--CC

AT1G43890.2 RAB GTPASE HOMOLOG B18

2.7e-65

71.08

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFK+K L +G K+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TF NLSD+W+KE++LYSTN+DC+KML+GNKVD+ESERAVS++EGI 
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSS--CC
         + E G  FLECSAKTR NVE+CFE+L LKI+E PSL  EGS+  K+NI KQ   Q  STSS  CC
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSS--CC

AT1G43890.3 RAB GTPASE HOMOLOG B18

2.7e-65

71.08

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFK+K L +G K+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TF NLSD+W+KE++LYSTN+DC+KML+GNKVD+ESERAVS++EGI 
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSS--CC
         + E G  FLECSAKTR NVE+CFE+L LKI+E PSL  EGS+  K+NI KQ   Q  STSS  CC
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQAASTSS--CC

AT3G09910.1 RAB GTPase homolog C2B

7.3e-63

76.87

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIK ++V GKRLKLTIWDTAGQE+FRTLTSSY+RG+QGIILVYDVT+RETF NL+D+W+KE+ELYSTN DC+KML+GNKVDRESER VSREEG+A
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKR
        L+ +L   F ECSA+TRENV  CFE+LALKIME PSL+EEGS+ VKR
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKR

AT5G03530.1 RAB GTPase homolog C2A

8.6e-72

Show/hide

Query:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA
        +GVDFKIK L VGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETF NL DVW KE+ELYSTN++CV+ML+GNKVDRESER VSREEGIA
Subjt:  LGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIA

Query:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQ-EFQAASTSSCC
        L+ EL   FLECSA+TR+NVE+CFE+LALKIME PSL+EEGS+ VKRNILKQ+ E Q  + S CC
Subjt:  LSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQ-EFQAASTSSCC

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTGACAGTGAGGCTTTCACAATCAGCCATTTCTATAAAATCTTTGACTGTGAGACTTTGTCGTCGGTGATTCTTTTGCTGATGGCTTATTTATTAGCCGTCCGCGG
TTCCTGGGCCGGGATTCGTATCATTCTTGTAGTGTTATGTGTTTGGATCTGTTTTGTTTTAATGAAAGTTTGTTTCTTTTTAGGTGTGGATTTTAAGATCAAGCTGCTTC
AGGTTGGGGGTAAGAGATTGAAGCTGACAATCTGGGACACTGCTGGACAAGAGAGATTCAGAACCTTGACAAGTTCCTATTATAGAGGTGCACAAGGGATCATTCTTGTT
TACGATGTCACACGGAGAGAAACGTTCGATAACTTATCCGACGTATGGTCTAAAGAAGTGGAACTCTACTCAACAAATAAGGATTGTGTCAAGATGCTCATTGGTAATAA
GGTTGACAGAGAATCTGAAAGGGCTGTGAGCAGAGAGGAGGGGATTGCTCTATCAAATGAGCTTGGATCCTTTTTTCTAGAATGCAGTGCTAAAACAAGAGAGAATGTGG
AGAAATGCTTTGAAGATTTGGCACTGAAGATAATGGAGGCTCCTAGTTTGATTGAAGAAGGTTCCACTGTTGTAAAAAGAAACATTCTGAAACAGCAAGAATTCCAGGCT
GCATCAACTTCAAGTTGCTGCCTCTGA

mRNA sequence

Show/hide mRNA sequence

AACAATCATTGCATACAAACAGTTACTCCAAAAACAGAAAGAAAAAAAAAATGTCACCTTTATTTCAAAATTCAAAAACTTTTTAGCAAAGAATAATATCTTATCATCAA
AAAAGAAAACCCCATTTTGATTCTAACAAAAACAGAAGGGTAGGTCTCAAAACTTGATTCCAAGAAAAAGCTTTGTTTACAAGAAACCCCTTTGCTGAAACAGCAATCCC
ATTCCCACCCAGTAGAGAGTTGGGACAAAACAATGGAAATCCACAAAACATAACATCTAAGAAAAGAAATTAGAAGGAGAAAGGGCAAAGAACAAATACGTTGTTGTCTC
TGTTGGTGCTCACTTAGCTGTTTTCTTGCAACTTATTCTTCTCTTTTCTTACCCCAATAAAAACATGGGGTTGTATTAGAAATTTTGTGTATTACTTTCTTCTGATTCTA
ATTTTGTTCCTTTTTTTTGTTATTGATTGTATTTGATTTGTGAAGAAGATCATTGAAATGGGATCTTCTTCAGGCCAAAGTAGCACTTACGATCTGTCGTTTAAGGTTTT
GTTGATCGGCGATTCAGGTGTCGGCAAAAGTAGTCTTCTTCTCAGCTTCATCTCTGCTAATGCTCAAAATCTTGCCCCTACTATTGGTATGTTTTTGTTTTGCCATATAA
ACCAAAACCCCGGTTTTTATTTTGAATAAAGTTTGTGTTTTTCTGTTCTTAATCTGTATGAGGAAGTGTTTTTCTGTTCATAGTATGTTTGGTTGTGGAGCAAATGGAAG
GAAGAAAGATGAATCGCCGACGATGTTAAGGTTCCACCTCGGAAAGAGAGGAGAGCTCATATCAATAAATAAGAGATATGAGTTATTCTCTTCATTACCGATTGATTTTA
AGGTGAAACCTCATATTTTCTAATAGACGACAAACAAGTGGTGCCCTCGGCGATTGTTGAAGACAAAATGGCTGATGGTGAAGCCTCACTGTCGTCGTGAATGGCTGACA
GTGAGGCTTTCACAATCAGCCATTTCTATAAAATCTTTGACTGTGAGACTTTGTCGTCGGTGATTCTTTTGCTGATGGCTTATTTATTAGCCGTCCGCGGTTCCTGGGCC
GGGATTCGTATCATTCTTGTAGTGTTATGTGTTTGGATCTGTTTTGTTTTAATGAAAGTTTGTTTCTTTTTAGGTGTGGATTTTAAGATCAAGCTGCTTCAGGTTGGGGG
TAAGAGATTGAAGCTGACAATCTGGGACACTGCTGGACAAGAGAGATTCAGAACCTTGACAAGTTCCTATTATAGAGGTGCACAAGGGATCATTCTTGTTTACGATGTCA
CACGGAGAGAAACGTTCGATAACTTATCCGACGTATGGTCTAAAGAAGTGGAACTCTACTCAACAAATAAGGATTGTGTCAAGATGCTCATTGGTAATAAGGTTGACAGA
GAATCTGAAAGGGCTGTGAGCAGAGAGGAGGGGATTGCTCTATCAAATGAGCTTGGATCCTTTTTTCTAGAATGCAGTGCTAAAACAAGAGAGAATGTGGAGAAATGCTT
TGAAGATTTGGCACTGAAGATAATGGAGGCTCCTAGTTTGATTGAAGAAGGTTCCACTGTTGTAAAAAGAAACATTCTGAAACAGCAAGAATTCCAGGCTGCATCAACTT
CAAGTTGCTGCCTCTGAATACTCTAGTACGAAACATCGACACGTAGCACGATTCTCCTTGTTGGCACTTCTTGTACATGTCTTCTCTTGTTCCTCCTTGTCATTGATTTG
TTTGCTTGCTTAAATGACCGTAATTGGGAGTTGTAGAGAAAAGAGAGAGAATCAAATACACCAATCCACTTGTGTAATCTTTGTTTTTTTCTTCCTATCTTTGGGATTGT
TGACATTGTATTGTACCTATCTATACTAACAAAATTCGGCCTTGTCTCATATCGATCGACACACATTACTCGATATCTTGATATTCTCGCTCAAGTTCCCCCATTAATCA
ACAAATTGATTCGATCTCAAACTGGGAAGTTAGAGTTCAGGAAAAACTCTTAACAATTTTGGAAAAGATAACCAAAACC

Protein sequence

Show/hide protein sequence

MADSEAFTISHFYKIFDCETLSSVILLLMAYLLAVRGSWAGIRIILVVLCVWICFVLMKVCFFLGVDFKIKLLQVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILV
YDVTRRETFDNLSDVWSKEVELYSTNKDCVKMLIGNKVDRESERAVSREEGIALSNELGSFFLECSAKTRENVEKCFEDLALKIMEAPSLIEEGSTVVKRNILKQQEFQA
ASTSSCCL

Sed0028200 (gene) of Chayote v1 genome