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Sed0028225 (gene) of Chayote v1 genome

Gene IDSed0028225
OrganismSechium edule (Chayote v1)
Descriptiondefensin-like protein 1
Genome locationLG04:42345579..42346451
RNA-Seq ExpressionSed0028225
SyntenySed0028225
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024858.1 Defensin-like protein 19, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-2470Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        +A    MAVA LF  ALMLSMN +  +VEAK+CER SKTWSG CG +SHCDRQCKNWEGAKHGACH++  GR CFCYF+C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

XP_022935763.1 defensin-like protein 1 [Cucurbita moschata]5.8e-2571.25Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        +A +  MAVA LF FALMLSMN    +VEAK+CER SKTWSG CG +SHCDRQCKNWEGAKHGACH++  GR CFCYF+C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

XP_022976615.1 defensin-like protein 1 [Cucurbita maxima]6.8e-2672.5Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        +A +  MAVA LF FALMLSMNE+  +VEAK+CER SKTWSG CG +SHCDRQCKNWEGAKHGACH++  GR CFCYF+C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

XP_023535147.1 defensin-like protein 1 [Cucurbita pepo subsp. pepo]7.5e-2570Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        +A +  MAVA +F FALMLS NE+  +VEAK+CER SKTWSG CG +SHCDRQCKNWEGAKHGACH++  GR CFCYF+C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

XP_038900009.1 defensin-like protein 1 [Benincasa hispida]9.8e-2574.32Show/hide
Query:  MAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        M VA+LF  ALMLSMNE+  MVEAK+CE+ SKTWSG CG +SHCDRQCKNWEGAKHGACH++  GR CFCYF+C
Subjt:  MAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

TrEMBL top hitse value%identityAlignment
A0A0A0LFX9 Knot1 domain-containing protein9.0e-2466.25Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        +  +  M VA+LF  ALMLSMNE+  +VEAK+CER SKTWSG CG + HCDRQCKNWEGA HGACH++  GR CFCYF+C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

A0A5A7T656 Defensin-like protein 11.5e-2366.25Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        +  +  M VA LF  AL LSMNE+  +VEAK+CER SKTWSG CG + HCDRQCKNWEGAKHGACH++  GR CFCYF+C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

A0A6J1CDS6 defensin-like protein 15.3e-2471.62Show/hide
Query:  MAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        M VA+L   ALMLS+NE  V VEAK+CE+ SKTWSG CG +SHCDRQCKNWEGAKHGACH++  GR CFCYF+C
Subjt:  MAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

A0A6J1FBE9 defensin-like protein 12.8e-2571.25Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        +A +  MAVA LF FALMLSMN    +VEAK+CER SKTWSG CG +SHCDRQCKNWEGAKHGACH++  GR CFCYF+C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

A0A6J1IJY9 defensin-like protein 13.3e-2672.5Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        +A +  MAVA LF FALMLSMNE+  +VEAK+CER SKTWSG CG +SHCDRQCKNWEGAKHGACH++  GR CFCYF+C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

SwissProt top hitse value%identityAlignment
P0C8Y4 Defensin-like protein 12.3e-1666Show/hide
Query:  KLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        +LCE+ SKTWSG+CG + HCD QCK+WEGA HGACH R    +CFCYF+C
Subjt:  KLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

P22357 Anther-specific protein SF18 (Fragment)5.6e-1558.49Show/hide
Query:  VEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        V  K+CE+ SKTW G+C  +  CD++C +WEGAKHGACH R    +CFCYFDC
Subjt:  VEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

P82787 Defensin-like protein 192.5e-1545.45Show/hide
Query:  ATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        A++  + +    ++ L  + E + VE ++CER SKTW+G CG +  CD QCK WE A HGACH++  G  CFCYF+C
Subjt:  ATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

Q7M1F2 Defensin-like protein 11.3e-1465.31Show/hide
Query:  LCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        LCER S TW+G+CG + HCD QC+NWE AKHGACH R   + CFCYF+C
Subjt:  LCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

Q7M1F3 Defensin-like protein 11.4e-1362Show/hide
Query:  LC-ERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        LC ER S+TWSG+CG ++HCD+QC++WE A HGACH R     CFCYF+C
Subjt:  LC-ERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

Arabidopsis top hitse value%identityAlignment
AT1G19610.1 Arabidopsis defensin-like protein1.8e-1645.45Show/hide
Query:  ATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        A++  + +    ++ L  + E + VE ++CER SKTW+G CG +  CD QCK WE A HGACH++  G  CFCYF+C
Subjt:  ATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

AT1G75830.1 low-molecular-weight cysteine-rich 675.1e-1146.84Show/hide
Query:  ATNMAVAMLFFFALM-LSMNEEHVMVEA-KLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        A +  +  LFF AL+  +  E  ++VEA KLCER S TWSG CG S+ C  QC N E A+HG+C+       C CYF C
Subjt:  ATNMAVAMLFFFALM-LSMNEEHVMVEA-KLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

AT2G26010.1 plant defensin 1.33.5e-1246.91Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEA-KLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        MAK+  + +  LF   ++ +  E  +MVEA KLCE+ S TWSG CG S+ C  QC N EGAKHG+C+       C CYF C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEA-KLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

AT5G44420.1 plant defensin 1.21.1e-1043.21Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEA-KLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        MAK  ++ + ++F   ++ +  +   MVEA KLCE+ S TWSG CG S+ C  QC N EGAKHG+C+       C CY  C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEA-KLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC

AT5G44430.1 plant defensin 1.2C3.0e-1145.68Show/hide
Query:  MAKATNMAVAMLFFFALMLSMNEEHVMVEA-KLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC
        MAK+  + +  LF   ++ +  E   MVEA KLCE+ S TWSG CG S+ C  QC N EGAKHG+C+       C CY  C
Subjt:  MAKATNMAVAMLFFFALMLSMNEEHVMVEA-KLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAGCTACCAACATGGCTGTTGCTATGCTCTTCTTTTTTGCCCTCATGCTTTCCATGAATGAAGAGCACGTGATGGTCGAGGCAAAGCTGTGCGAGAGGTGGAG
CAAGACGTGGTCGGGATCGTGCGGGATCTCGAGCCATTGCGACAGGCAATGCAAGAACTGGGAAGGTGCAAAACATGGAGCTTGCCATTCCCGACCTCGAGGAAGGGTTT
GTTTTTGCTACTTCGATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTCATAAAGAAATTAAAAACACAAAAGAAATGGCCAAAGCTACCAACATGGCTGTTGCTATGCTCTTCTTTTTTGCCCTCATGCTTTCCATGAATGAAGAGCACGTGA
TGGTCGAGGCAAAGCTGTGCGAGAGGTGGAGCAAGACGTGGTCGGGATCGTGCGGGATCTCGAGCCATTGCGACAGGCAATGCAAGAACTGGGAAGGTGCAAAACATGGA
GCTTGCCATTCCCGACCTCGAGGAAGGGTTTGTTTTTGCTACTTCGATTGTTGAAAAACCATGAAGAACAATCCTATCATAAAACAATCTATCTTTCCTTTTCTTCTAAA
CTTTTGTGTTATCGCATCCATGAAATAAAAAAAGGTTCAGTTTTGATTTCTGAACTAATGTGTGTGTGTTTTTTACTTATGTAAGTGTGTGGAAAAATGATCTATAATAT
ATATGTATGGTTTTTAGGAGTTTGGGAATATCTTTTCCTCTTCATCTAAATATTGAATAAAATGACTTTGAATTAGTATTTA
Protein sequenceShow/hide protein sequence
MAKATNMAVAMLFFFALMLSMNEEHVMVEAKLCERWSKTWSGSCGISSHCDRQCKNWEGAKHGACHSRPRGRVCFCYFDC