CuGenDBv2

Gene ID	Sed0028236
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG03:46851793..46853243
RNA-Seq Expression	Sed0028236
Synteny	Sed0028236
Gene Ontology terms	NA
InterPro domains	IPR040344 - Uncharacterized protein At3g17950-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6595318.1 hypothetical protein SDJN03_11871, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-34

64.49

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Query:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS
        QQ+DGWPLGLR+LNAR+GLLE+R F  SISFNTLPTG   +FTDSSDLDS+SSGSF  A+SI+    +  S  VE+ RR S            RKN  KS
Subjt:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS

Query:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS
        + WLFSLCC+LST+AV VTRTHSLAHFLEAERRR AA+
Subjt:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS

KAG7027328.1 hypothetical protein SDJN02_11340, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-34

64.49

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Query:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS
        QQ+DGWPLGLR+LNAR+GLLE+R F  SISFNTLPTG   +FTDSSDLDS+SSGSF  A+SI+    +  S  VE+ RR S            RKN  KS
Subjt:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS

Query:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS
        + WLFSLCC+LST+AV VTRTHSLAHFLEAERRR AA+
Subjt:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS

XP_022972785.1 uncharacterized protein LOC111471292 [Cucurbita maxima]

1.7e-34

64.49

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Query:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS
        QQ+DGWPLGLR+LNAR+GLLE+R F  SISFNTLPTG   +FTDSSDLDS+SSGSFF A+SI+    +  S  VE+  R S            RKN  KS
Subjt:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS

Query:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS
        + WLFSLCC+LST+AV VTRTHSLAHFLEAERRR AA+
Subjt:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS

XP_023518387.1 uncharacterized protein LOC111781890 isoform X1 [Cucurbita pepo subsp. pepo]

3.7e-34

63.77

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Query:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS
        QQ+DGWPLGLR+LNAR+GLLE+R F  SISFNTLPTG   +FTDSSDLDS+SSGSF  A+SI+    +  S  VE+ RR S            RKN  KS
Subjt:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS

Query:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS
        + WLFSLCC+LST+AV VTRTHSLAHFLEAERRR A +
Subjt:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS

XP_023518388.1 uncharacterized protein LOC111781890 isoform X2 [Cucurbita pepo subsp. pepo]

3.7e-34

63.77

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Query:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS
        QQ+DGWPLGLR+LNAR+GLLE+R F  SISFNTLPTG   +FTDSSDLDS+SSGSF  A+SI+    +  S  VE+ RR S            RKN  KS
Subjt:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS

Query:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS
        + WLFSLCC+LST+AV VTRTHSLAHFLEAERRR A +
Subjt:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KX74 Uncharacterized protein

3.7e-32

61.27

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Query:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSITVDDSI------TVEVPRRWSRK--------------N
        QQ+DGWPLGLR+LNAR+GLLE+R F  SISFNTLPTG   +FTDSS LDSESSGSFF ++SIT+   I       +E+ RR SR+              N
Subjt:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSITVDDSI------TVEVPRRWSRK--------------N

Query:  Y--LKSRTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNA
        Y  LKS+ WLFSLCC+LST+AVI TRTHSLAHFLE ER+R A
Subjt:  Y--LKSRTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNA

A0A1S4DWX0 uncharacterized protein LOC103490160 isoform X1

4.1e-31

59.86

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Query:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSITV------DDSITVEVPRRWSRK--------------N
        QQ+DGWPLGLR+LNAR+GLLE+R F  SISFNTLPTG   +FTDSS LDSESSGSFF ++S T+        S  +E+ RR SR+              N
Subjt:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSITV------DDSITVEVPRRWSRK--------------N

Query:  Y--LKSRTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNA
        Y   KS+ WLFSLCC+LST+AVI TRTHSLAHFLE ER+R A
Subjt:  Y--LKSRTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNA

A0A6J1CR51 uncharacterized protein LOC111013562

2.4e-31

61.22

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Query:  QQEDGWPLGLRVLNARLGLLEDRHF-CRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSIT--VEVPRR-------------WSRKN
        QQ+DGWPLGLR+LNAR+GLL DR F   SISFNTLPTG   +FTDSSDLDSES+GSFF  +SIT    +DDS +  VE+ RR               RKN
Subjt:  QQEDGWPLGLRVLNARLGLLEDRHF-CRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSIT--VEVPRR-------------WSRKN

Query:  Y-LKSRTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAASRQTR
          LKS+ WLFSLCC+LST+AV  TRT SLAHFLEAERR++AA+   R
Subjt:  Y-LKSRTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAASRQTR

A0A6J1HEB8 uncharacterized protein LOC111463409

2.3e-34

63.77

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Query:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS
        QQ+DGWPLGLR+LNAR+GLLE+R F  SISFNTLPTG   +F DSSDLDS+SSGSF  A+SI+    +  S  VE+ RR S            RKN  KS
Subjt:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS

Query:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS
        + WLFSLCC+LST+AV VTRTHSLAHFLEAERRR AA+
Subjt:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS

A0A6J1I9M4 uncharacterized protein LOC111471292

8.0e-35

64.49

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Query:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS
        QQ+DGWPLGLR+LNAR+GLLE+R F  SISFNTLPTG   +FTDSSDLDS+SSGSFF A+SI+    +  S  VE+  R S            RKN  KS
Subjt:  QQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTG---TFTDSSDLDSESSGSFFQAQSIT----VDDSITVEVPRRWS------------RKNYLKS

Query:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS
        + WLFSLCC+LST+AV VTRTHSLAHFLEAERRR AA+
Subjt:  RTWLFSLCCRLSTNAVIVTRTHSLAHFLEAERRRNAAS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G02440.1 unknown protein

4.5e-14

36.48

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Query:  QEDGWPLGLRVLNARLGLL---------EDRHFCRSISFNTL--PTGTFTDSSDLDSESSGSFFQAQSITVDDSITV----EVPRRWSR-----------
        QE+GWPLGLR +NAR+G L          ++    SISF++L  P+ +   SSDLDS+S GSFF+ +S T+ + I +    E+ RR +R           
Subjt:  QEDGWPLGLRVLNARLGLL---------EDRHFCRSISFNTL--PTGTFTDSSDLDSESSGSFFQAQSITVDDSITV----EVPRRWSR-----------

Query:  -------KNYLKSRTWLFSLCCRLSTNAVIVT-------------RTHSLAHFLEAERR
               K Y K   W+FS+C +LSTNA +++                SL HFL  ERR
Subjt:  -------KNYLKSRTWLFSLCCRLSTNAVIVT-------------RTHSLAHFLEAERR

Sequences

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CDS sequence

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ATGGCTCAACAGCAGGAGGATGGGTGGCCGTTGGGATTAAGAGTACTGAACGCTAGACTTGGATTGCTGGAAGATCGACACTTTTGTAGATCAATCTCATTCAACACTTT
GCCTACTGGAACATTCACCGACTCTTCAGATCTTGATTCTGAGTCAAGTGGGTCATTCTTCCAGGCTCAAAGCATCACTGTGGATGATTCTATCACAGTGGAGGTTCCAA
GAAGATGGTCAAGAAAGAATTACTTGAAGTCCAGGACATGGTTGTTTTCTCTCTGCTGCAGATTAAGCACCAACGCTGTGATCGTCACCCGAACTCACTCTCTGGCTCAC
TTTCTAGAGGCCGAGAGGAGGAGAAATGCCGCTTCTAGACAAACCCGCTGA

mRNA sequence

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CTCTGTGGAACCTGAACTTAAAATTTGTTTTATATTCCAAACATTATCTTTCTTCTTTTCCACATTAAATTTAGCCTCCATTCTACCATTTTTCTCTCTAGTGGGATTGT
GTATTCATCCTTTTCCAAATTTGTTCATAATACAGAAACAGAGAAATGGAATAGGAGGATGTACAGCCAGTGAATTGATGGCTCAACAGCAGGAGGATGGGTGGCCGTTG
GGATTAAGAGTACTGAACGCTAGACTTGGATTGCTGGAAGATCGACACTTTTGTAGATCAATCTCATTCAACACTTTGCCTACTGGAACATTCACCGACTCTTCAGATCT
TGATTCTGAGTCAAGTGGGTCATTCTTCCAGGCTCAAAGCATCACTGTGGATGATTCTATCACAGTGGAGGTTCCAAGAAGATGGTCAAGAAAGAATTACTTGAAGTCCA
GGACATGGTTGTTTTCTCTCTGCTGCAGATTAAGCACCAACGCTGTGATCGTCACCCGAACTCACTCTCTGGCTCACTTTCTAGAGGCCGAGAGGAGGAGAAATGCCGCT
TCTAGACAAACCCGCTGAGCGTATTAGATAGTGTGAGCATCCAACCGATGTGGGATGTTCAACAGAGCACAATCATAATCAGTTGGTTTGGCCAAAAAATTGATGTTGTT
GGGCCTTCCAACCTCTATGCTTTGATTTTCAATGATGGTTATTTTTGTTTGACTTCTCCTTTGGTGCATATTCAAGTGGAGAGTAATGCTCTCTGTTCCTTTAAA

Protein sequence

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MAQQQEDGWPLGLRVLNARLGLLEDRHFCRSISFNTLPTGTFTDSSDLDSESSGSFFQAQSITVDDSITVEVPRRWSRKNYLKSRTWLFSLCCRLSTNAVIVTRTHSLAH
FLEAERRRNAASRQTR

Sed0028236 (gene) of Chayote v1 genome