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Sgr000476 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr000476
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionReplication protein A subunit
Genome locationtig00000239:17545..18120
RNA-Seq ExpressionSgr000476
SyntenySgr000476
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006268 - DNA unwinding involved in DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0007004 - telomere maintenance via telomerase (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0003684 - damaged DNA binding (molecular function)
GO:0043047 - single-stranded telomeric DNA binding (molecular function)
InterPro domainsIPR007199 - Replication factor-A protein 1, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453278.1 PREDICTED: replication protein A 70 kDa DNA-binding subunit B [Cucumis melo]9.5e-2058.1Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE
        MA   T GGI KIL+NP P SP DVP+VVVQV+DL   G+ Y F A+DG MKL  I+PSN+    +SGNIQN GLIRILDY L +    S + LI+ KC 
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE

Query:  LVSPA
        +VSPA
Subjt:  LVSPA

XP_011648462.1 replication protein A 70 kDa DNA-binding subunit B [Cucumis sativus]1.1e-2058.1Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE
        MA   T GGI K+L+NP P SP+DVP+VVVQV+DL   G+ Y F A+DG MKL  I+PSN+    +SGNIQN GLIRILDY L +    S + LI+ KCE
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE

Query:  LVSPA
        +VSPA
Subjt:  LVSPA

XP_022971740.1 replication protein A 70 kDa DNA-binding subunit B [Cucurbita maxima]2.3e-1856.19Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE
        MA   TPGGI KILANP P S +DVP+VV+QV+DL   G+ Y F A DG MKL  I+PSN+    +SGNIQN GLIR+LDY L +      + LI+ KCE
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE

Query:  LVSPA
        +VS A
Subjt:  LVSPA

XP_023530839.1 replication protein A 70 kDa DNA-binding subunit B [Cucurbita pepo subsp. pepo]2.3e-1856.19Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE
        MA   TPGGI KILANP P S +DVP+VV+QV+DL   G+ Y F A DG MKL  I+PSN+    +SGNIQN GLIR+LDY L +      + LI+ KCE
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE

Query:  LVSPA
        +VS A
Subjt:  LVSPA

XP_038878718.1 replication protein A 70 kDa DNA-binding subunit B-like [Benincasa hispida]2.8e-1956.19Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE
        MA   T GGI  IL+NP P SP+DVP+VVVQV+DL   G+ Y F A+DG MKL  I+PSN+    +SGNIQN GLIR+LDY L +      + LI+ KCE
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE

Query:  LVSPA
        +VSPA
Subjt:  LVSPA

TrEMBL top hitse value%identityAlignment
A0A0A0LSG2 Replication protein A subunit5.4e-2158.1Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE
        MA   T GGI K+L+NP P SP+DVP+VVVQV+DL   G+ Y F A+DG MKL  I+PSN+    +SGNIQN GLIRILDY L +    S + LI+ KCE
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE

Query:  LVSPA
        +VSPA
Subjt:  LVSPA

A0A1S3BX02 Replication protein A subunit4.6e-2058.1Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE
        MA   T GGI KIL+NP P SP DVP+VVVQV+DL   G+ Y F A+DG MKL  I+PSN+    +SGNIQN GLIRILDY L +    S + LI+ KC 
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE

Query:  LVSPA
        +VSPA
Subjt:  LVSPA

A0A5A7UTE7 Replication protein A subunit4.6e-2058.1Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE
        MA   T GGI KIL+NP P SP DVP+VVVQV+DL   G+ Y F A+DG MKL  I+PSN+    +SGNIQN GLIRILDY L +    S + LI+ KC 
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE

Query:  LVSPA
        +VSPA
Subjt:  LVSPA

A0A6J1F085 Replication protein A subunit1.1e-1856.19Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE
        MA   TPGGI KILANP P S +DVP+VV+QV+DL   G+ Y F A DG MKL  I+PSN+    +SGNIQN GLIR+LDY L +      + LI+ KCE
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE

Query:  LVSPA
        +VS A
Subjt:  LVSPA

A0A6J1I6K6 Replication protein A subunit1.1e-1856.19Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE
        MA   TPGGI KILANP P S +DVP+VV+QV+DL   G+ Y F A DG MKL  I+PSN+    +SGNIQN GLIR+LDY L +      + LI+ KCE
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCLIN----SSRSLILLKCE

Query:  LVSPA
        +VS A
Subjt:  LVSPA

SwissProt top hitse value%identityAlignment
Q10Q08 Replication protein A 70 kDa DNA-binding subunit B4.1e-1039.62Show/hide
Query:  AITATPGGILKILANPLP--ASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCL----INSSRSLILLKC
        A + TPG +  +L N  P  A+   VPE+V+QVVDL P G+ + F+A+DG  K+  ++ + +     SGNIQN G+IR+LDY          + LI+ K 
Subjt:  AITATPGGILKILANPLP--ASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCL----INSSRSLILLKC

Query:  ELVSPA
        E+V  A
Subjt:  ELVSPA

Q9FME0 Replication protein A 70 kDa DNA-binding subunit D3.8e-1137.84Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCL----INSSRSLILLKCE
        M  + TP  I  +L+NP   S +D  E+VVQVVDL P G+ Y F A DG  K+  +  +++    +SG IQN GLIR++D+ +      S++  ++ KCE
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCL----INSSRSLILLKCE

Query:  LVSPAPALETN
         V      E N
Subjt:  LVSPAPALETN

Q9SD82 Replication protein A 70 kDa DNA-binding subunit B8.9e-1341.51Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCL-----INSSRSLILLKC
        M  + T  GI  +LAN    S +  PE+VVQVVDL PAG+ Y F A DG MK+  ++P+ +    +SG IQN GLIR+L+Y +      +  + +++ KC
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCL-----INSSRSLILLKC

Query:  ELVSPA
        E V+ A
Subjt:  ELVSPA

Arabidopsis top hitse value%identityAlignment
AT5G08020.1 RPA70-kDa subunit B6.3e-1441.51Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCL-----INSSRSLILLKC
        M  + T  GI  +LAN    S +  PE+VVQVVDL PAG+ Y F A DG MK+  ++P+ +    +SG IQN GLIR+L+Y +      +  + +++ KC
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCL-----INSSRSLILLKC

Query:  ELVSPA
        E V+ A
Subjt:  ELVSPA

AT5G61000.1 Replication factor-A protein 1-related2.7e-1237.84Show/hide
Query:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCL----INSSRSLILLKCE
        M  + TP  I  +L+NP   S +D  E+VVQVVDL P G+ Y F A DG  K+  +  +++    +SG IQN GLIR++D+ +      S++  ++ KCE
Subjt:  MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNID---LSGNIQNEGLIRILDYCL----INSSRSLILLKCE

Query:  LVSPAPALETN
         V      E N
Subjt:  LVSPAPALETN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCACAGCAACCCCCGGCGGGATTTTAAAGATATTGGCGAATCCATTGCCGGCCTCGCCCGCGGATGTCCCGGAGGTCGTGGTTCAGGTCGTCGATCTC
AGTCCGGCTGGAAGTCATTACAGATTTATTGCTACCGATGGGACTATGAAGCTATTAGTTATAATACCGTCAAACATTGACCTCTCTGGGAACATCCAAAATGAG
GGGCTTATTCGCATTCTTGATTATTGTCTCATCAACTCATCAAGGTCTCTAATCCTGCTAAAATGTGAGCTGGTTTCTCCTGCTCCTGCTCTAGAAACCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCACAGCAACCCCCGGCGGGATTTTAAAGATATTGGCGAATCCATTGCCGGCCTCGCCCGCGGATGTCCCGGAGGTCGTGGTTCAGGTCGTCGATCTC
AGTCCGGCTGGAAGTCATTACAGATTTATTGCTACCGATGGGACTATGAAGCTATTAGTTATAATACCGTCAAACATTGACCTCTCTGGGAACATCCAAAATGAG
GGGCTTATTCGCATTCTTGATTATTGTCTCATCAACTCATCAAGGTCTCTAATCCTGCTAAAATGTGAGCTGGTTTCTCCTGCTCCTGCTCTAGAAACCAACTGA
Protein sequenceShow/hide protein sequence
MAITATPGGILKILANPLPASPADVPEVVVQVVDLSPAGSHYRFIATDGTMKLLVIIPSNIDLSGNIQNEGLIRILDYCLINSSRSLILLKCELVSPAPALETN