| GenBank top hits | e value | %identity | Alignment |
|---|
| PNY13707.1 putative copia-type protein, partial [Trifolium pratense] | 2.4e-192 | 60.11 | Show/hide |
Query: LSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPT
L+ + KQ EPK+ KSALK P W AM+EE+ AL N TW+LVP+P++ N++GSKW+++ K KEDGSI+R+KARLVA+G+TQV G+D++ETFSP+VK T
Subjt: LSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPT
Query: TIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITM
TIR V+A++++ W +RQLDVKNAFLHG +KE VFM QPPGF +P P HVC L +SLYGLKQAPRAWF+RLS FL+ GF CS +D S FI KT+ +T
Subjt: TIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITM
Query: IMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYR
++LIYVDDI+V GN++ + L+Q+L EFA+KDLGP HYFLG+E DG+ L+Q+KY D+L+KTKM+ TP + ++D+ +V+ATE+R
Subjt: IMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYR
Query: SIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQ
SIVG+LQYLT TRPDIT+AVN+ CQ P + DLKAVKRILRYL GT N G+ + N+ LY F DADW GCP RRSTTGYC+FLGANCISW SKKQ
Subjt: SIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQ
Query: PTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPL
PT+ARSS+EAEYR+MA TTAELTWI+++L+DI + + + PQLFCDN+SAL MS+NPVFHARTKHIE+DYHFVRE+VA+G L+TRY P+ Q+AD+ TKPL
Subjt: PTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPL
Query: SKESFKKLRSKLGVRCTSSSLRKNERKQVNPTSL
+K+SF K RSKLGV + + + K+ N L
Subjt: SKESFKKLRSKLGVRCTSSSLRKNERKQVNPTSL
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| PNY16899.1 copia-like polyprotein, partial [Trifolium pratense] | 1.6e-180 | 54.39 | Show/hide |
Query: SIFAGSSMQTTNGDK--QGQQHNLKEKAPVE----PHHMVTRGKSAKDPQLY-------STIHK--KGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEE
S F S Q + D Q + NL +E P + TR K P Y TI H +LI + + EPK++K+ALK +W+ AM+EE
Subjt: SIFAGSSMQTTNGDK--QGQQHNLKEKAPVE----PHHMVTRGKSAKDPQLY-------STIHK--KGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEE
Query: MKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLK
+ AL N+TW LVP+P N++GSKW+F+TKL EDGSI+R+KARLVA+GYTQ+ GLD+ ETFSP+VK TIR++L++AV W L+QLDVKNAFLHG L
Subjt: MKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLK
Query: EEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFA
E V+M QPPGF+HP L HVC+L++SLYGLKQAPRAWFE+LS L GF CS +DPS FI + + ++L+YVDDII+TGN+ + LI++L +FA
Subjt: EEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFA
Query: LKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPR
LKDLG HYFLGIE+ + GI +SQ KYA D+L + M++AS+ TP++ + +DN+LV+ATEYR + GSLQYLT TRPD+T+AVN VCQ Q P
Subjt: LKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPR
Query: IKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKD
KDL+AVKRILRY+ GT HG+ + SSL L AF DADW GCP RRSTTG+CI+LG +CISW SKKQPT++RSS+EAEYRA+A T +ELTW+ ++L D
Subjt: IKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKD
Query: IGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGVRCTS-SSLRKNERKQVN
IGI + P +FCDN SA+ MS NPVFHARTKHI IDYHF+RE+V G L RY+P+ Q+AD+ TKPL K+SF KLGV S SL+ + Q
Subjt: IGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGVRCTS-SSLRKNERKQVN
Query: PTS
TS
Subjt: PTS
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| RVW43526.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.0e-195 | 61.34 | Show/hide |
Query: HMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARL
HM+TR K DP L S + ++ AT+ ++ EPK++++ LKIPHW AM+EE+KAL++N TWDLVP+P TNI+GSKW+FKTKLKEDG+I+RYKARL
Subjt: HMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARL
Query: VAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFL
VA+G++Q+ GLD+ ETFSP++K TTIR++ ++AVT GWK+RQLDVKNAFLHG+LKEEVFM QPPGF + L HVCKLNRSLYGLKQAPRAWF+RLSQ L
Subjt: VAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFL
Query: VQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQY
+ GF C +D S FI + + +++LIYVDDIIVTGN + +LI LS EF+LKDLG HYFLG+EV + +G+ +SQ KY RD+L TKM+E +
Subjt: VQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQY
Query: ETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPD
TPM+ + + D + ++ T+YR +VGSLQYLT TRPDI +AVNK CQ Q P DL+AVKRILRYL GT HGI F+K SSL+L F DADW GC +
Subjt: ETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPD
Query: IRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERV
RRST+GYCIFLGANCISW SK+QPT++RSS+EAEYR++A + AE+TW++F+L+DIGI + +PPQL CDN+SAL M +N VFHAR+KHIE+DYHFVRE+V
Subjt: IRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERV
Query: ALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
A G+LITR++PS Q+ADI TK L K SF+ R KLGV
Subjt: ALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
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| RVX04530.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 2.0e-194 | 50.86 | Show/hide |
Query: DNEGQPNLASNQKTTLNASTESHIPCHLDISRSANHIDISTKLVSNQEPTQITC-IEDH---------TPSQLDNSRCVDQLNISGHQNQNNSQIIQTLT
++ G P + + + +T+ AS H +V+ + PT + DH T SQ++++ +S + + ++
Subjt: DNEGQPNLASNQKTTLNASTESHIPCHLDISRSANHIDISTKLVSNQEPTQITC-IEDH---------TPSQLDNSRCVDQLNISGHQNQNNSQIIQTLT
Query: PQE-------ALSLPDISNDMFVDFSIFAGSSMQTTNGDKQGQQHNLKEKAPVEPHHMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALK
PQ+ SL + S D + S + QH + HM+TR K DP L S + ++ A + ++ EPK++++ LK
Subjt: PQE-------ALSLPDISNDMFVDFSIFAGSSMQTTNGDKQGQQHNLKEKAPVEPHHMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALK
Query: IPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLD
IPHW M+EE+KAL++N TWDLVP+P TNI+GSKW+FKTKLKEDG+I+RYKARLVA+G++Q+ GLD+ ETFSP++K TTIR++ ++AVT GWK+RQLD
Subjt: IPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLD
Query: VKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHME
VKNAFLHG+LKEEVFM QPPGF + LP HVCKLNRSLYGLKQAPRAWF+RLSQ L+ GF C +D S FI + + +++LIYVDDIIVTGN +
Subjt: VKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHME
Query: ELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAV
+LI LS EF+LKDLG HYFLG+EV + +G+ +SQ KY RD+L TKM+E + TPM+ + + D + ++ T+YR +VGSLQYLT TRPDI +AV
Subjt: ELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAV
Query: NKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTA
NK CQ Q P DL+AVKRILRYL GT HGI F+K SSL+L F DADW GC + RRST+GYCIFLGANCISW SK+QPT++RSS+EAEYR++A + A
Subjt: NKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTA
Query: ELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
E+TW++F+L+DIGI + +PPQL CDN+SAL M++NPVFHAR+KHIE+DYHFVRE+ A G+LITR++PS Q+ADI TK L K SF+ R KLGV
Subjt: ELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
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| RVX04589.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 5.2e-195 | 49.07 | Show/hide |
Query: WIQGAEDKPENHNNSDLEVAKQCRNAHWFEESEHEATIP--VANNQLQEETPSQPTQDNEGQPNLASNQKTTLNAS---------TESHIPCHLDISRSA
W++ A EN N +K+C + E ++ ++ ++ + ++ G P + + +T+ AS TE+ L S
Subjt: WIQGAEDKPENHNNSDLEVAKQCRNAHWFEESEHEATIP--VANNQLQEETPSQPTQDNEGQPNLASNQKTTLNAS---------TESHIPCHLDISRSA
Query: NHIDISTKLVSNQEPTQITCIEDHTPSQLDNSRCVDQ---LNISGHQNQNNSQIIQTLTPQEALS------LPDISNDMFVDFSIFAGSSMQTTNGDKQG
+H +T +S QI + P+++ N + + +++S Q ++ + ++ S +PD S + VD S QG
Subjt: NHIDISTKLVSNQEPTQITCIEDHTPSQLDNSRCVDQ---LNISGHQNQNNSQIIQTLTPQEALS------LPDISNDMFVDFSIFAGSSMQTTNGDKQG
Query: QQHNLKEKAPVEPHHMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTK
Q + K HM+TR K DP L S + ++ AT+ ++ EPK++++ LKIPHW AM+EE+KAL++N TWDLVP+P TNI+GSKW+FKTK
Subjt: QQHNLKEKAPVEPHHMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTK
Query: LKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLK
LKEDG+I+RYKARLVA+G++Q+ GLD+ ETFSP++K TTIR++ ++AVT GWK+RQLDVKNAFLHG+LKEEVFM QPPGF + LP HVCKLNRSLYGLK
Subjt: LKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLK
Query: QAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYAR
QAPRAWF+RLSQ L+ GF C +D S FI + + +++LIYVDDIIVTGN + +LI LS EF+LKDLG HYFLG+EV + +G+ +SQ KY R
Subjt: QAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYAR
Query: DILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLK
D+L TKM+E + TPM+ + + D + ++ T+YR +VGSLQYLT TRPDI +AVNK CQ Q P DL+AVKRILRYL GT HGI F+K SSL+
Subjt: DILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLK
Query: LYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHART
L F DADW GC + RRST+GYCIFLGANCISW SK+QPT++RSS+EAEYR++A + AE+TW++F+L+DIGI + +PPQL CDN+SAL M++NPVFHAR+
Subjt: LYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHART
Query: KHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
KHIE+DYHFVRE+VA G+LITR++PS Q+ADI TK L K SF+ R KLGV
Subjt: KHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3PEI5 Putative copia-type protein (Fragment) | 1.2e-192 | 60.11 | Show/hide |
Query: LSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPT
L+ + KQ EPK+ KSALK P W AM+EE+ AL N TW+LVP+P++ N++GSKW+++ K KEDGSI+R+KARLVA+G+TQV G+D++ETFSP+VK T
Subjt: LSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPT
Query: TIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITM
TIR V+A++++ W +RQLDVKNAFLHG +KE VFM QPPGF +P P HVC L +SLYGLKQAPRAWF+RLS FL+ GF CS +D S FI KT+ +T
Subjt: TIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITM
Query: IMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYR
++LIYVDDI+V GN++ + L+Q+L EFA+KDLGP HYFLG+E DG+ L+Q+KY D+L+KTKM+ TP + ++D+ +V+ATE+R
Subjt: IMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYR
Query: SIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQ
SIVG+LQYLT TRPDIT+AVN+ CQ P + DLKAVKRILRYL GT N G+ + N+ LY F DADW GCP RRSTTGYC+FLGANCISW SKKQ
Subjt: SIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQ
Query: PTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPL
PT+ARSS+EAEYR+MA TTAELTWI+++L+DI + + + PQLFCDN+SAL MS+NPVFHARTKHIE+DYHFVRE+VA+G L+TRY P+ Q+AD+ TKPL
Subjt: PTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPL
Query: SKESFKKLRSKLGVRCTSSSLRKNERKQVNPTSL
+K+SF K RSKLGV + + + K+ N L
Subjt: SKESFKKLRSKLGVRCTSSSLRKNERKQVNPTSL
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| A0A2N9I9N7 CCHC-type domain-containing protein | 9.2e-190 | 59.89 | Show/hide |
Query: PVEPHHMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERY
P H M+TR K+ + H+ L T EPKS KSAL+ PHW AM +E+ AL +NHTW LVP+ S NI+GS+W+FKTKLK DGSIER+
Subjt: PVEPHHMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERY
Query: KARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERL
KARLVA+GY Q+EGLD+ ETFSP+VK TTIR+VL++A T GW LRQLDVKNAFLHG+LKE V+M QPPGF S P HVC+L++++YGLKQAPRAWF+R
Subjt: KARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERL
Query: SQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIE
S FL+ GF+CS +D S F+F+++ +++L+YVDDIIVT N + LI KLS EF++KDLGP HYFLGI+V H SDGI LSQ+KYAR+IL K M +
Subjt: SQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIE
Query: ASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWR
TP++ LV+AT YRSIVG+LQYLTLTRPD+T+AVN VCQ + P +AVKRILRYL GT +GI +SSL LY F DADW
Subjt: ASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWR
Query: GCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFV
GCPD RRSTTGYCI+LGANCISW SKKQ T++RSS+EAEYRAMA AELTW++++L D+GI + PP LFCDN SAL M++NPVFHARTKHIE+D+HFV
Subjt: GCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFV
Query: RERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV-RCTSSSLRKNERK
RE+VA G L TRYVPSQ Q+AD+ TK +SK+ F + R KLGV SSLR +++
Subjt: RERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV-RCTSSSLRKNERK
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| A0A438E6Z5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-195 | 61.34 | Show/hide |
Query: HMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARL
HM+TR K DP L S + ++ AT+ ++ EPK++++ LKIPHW AM+EE+KAL++N TWDLVP+P TNI+GSKW+FKTKLKEDG+I+RYKARL
Subjt: HMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARL
Query: VAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFL
VA+G++Q+ GLD+ ETFSP++K TTIR++ ++AVT GWK+RQLDVKNAFLHG+LKEEVFM QPPGF + L HVCKLNRSLYGLKQAPRAWF+RLSQ L
Subjt: VAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFL
Query: VQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQY
+ GF C +D S FI + + +++LIYVDDIIVTGN + +LI LS EF+LKDLG HYFLG+EV + +G+ +SQ KY RD+L TKM+E +
Subjt: VQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQY
Query: ETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPD
TPM+ + + D + ++ T+YR +VGSLQYLT TRPDI +AVNK CQ Q P DL+AVKRILRYL GT HGI F+K SSL+L F DADW GC +
Subjt: ETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPD
Query: IRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERV
RRST+GYCIFLGANCISW SK+QPT++RSS+EAEYR++A + AE+TW++F+L+DIGI + +PPQL CDN+SAL M +N VFHAR+KHIE+DYHFVRE+V
Subjt: IRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERV
Query: ALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
A G+LITR++PS Q+ADI TK L K SF+ R KLGV
Subjt: ALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
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| A0A438J6E1 Retrovirus-related Pol polyprotein from transposon RE1 | 9.5e-195 | 50.86 | Show/hide |
Query: DNEGQPNLASNQKTTLNASTESHIPCHLDISRSANHIDISTKLVSNQEPTQITC-IEDH---------TPSQLDNSRCVDQLNISGHQNQNNSQIIQTLT
++ G P + + + +T+ AS H +V+ + PT + DH T SQ++++ +S + + ++
Subjt: DNEGQPNLASNQKTTLNASTESHIPCHLDISRSANHIDISTKLVSNQEPTQITC-IEDH---------TPSQLDNSRCVDQLNISGHQNQNNSQIIQTLT
Query: PQE-------ALSLPDISNDMFVDFSIFAGSSMQTTNGDKQGQQHNLKEKAPVEPHHMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALK
PQ+ SL + S D + S + QH + HM+TR K DP L S + ++ A + ++ EPK++++ LK
Subjt: PQE-------ALSLPDISNDMFVDFSIFAGSSMQTTNGDKQGQQHNLKEKAPVEPHHMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALK
Query: IPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLD
IPHW M+EE+KAL++N TWDLVP+P TNI+GSKW+FKTKLKEDG+I+RYKARLVA+G++Q+ GLD+ ETFSP++K TTIR++ ++AVT GWK+RQLD
Subjt: IPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLD
Query: VKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHME
VKNAFLHG+LKEEVFM QPPGF + LP HVCKLNRSLYGLKQAPRAWF+RLSQ L+ GF C +D S FI + + +++LIYVDDIIVTGN +
Subjt: VKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHME
Query: ELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAV
+LI LS EF+LKDLG HYFLG+EV + +G+ +SQ KY RD+L TKM+E + TPM+ + + D + ++ T+YR +VGSLQYLT TRPDI +AV
Subjt: ELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAV
Query: NKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTA
NK CQ Q P DL+AVKRILRYL GT HGI F+K SSL+L F DADW GC + RRST+GYCIFLGANCISW SK+QPT++RSS+EAEYR++A + A
Subjt: NKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTA
Query: ELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
E+TW++F+L+DIGI + +PPQL CDN+SAL M++NPVFHAR+KHIE+DYHFVRE+ A G+LITR++PS Q+ADI TK L K SF+ R KLGV
Subjt: ELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
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| A0A438J6K3 Retrovirus-related Pol polyprotein from transposon RE1 | 2.5e-195 | 49.07 | Show/hide |
Query: WIQGAEDKPENHNNSDLEVAKQCRNAHWFEESEHEATIP--VANNQLQEETPSQPTQDNEGQPNLASNQKTTLNAS---------TESHIPCHLDISRSA
W++ A EN N +K+C + E ++ ++ ++ + ++ G P + + +T+ AS TE+ L S
Subjt: WIQGAEDKPENHNNSDLEVAKQCRNAHWFEESEHEATIP--VANNQLQEETPSQPTQDNEGQPNLASNQKTTLNAS---------TESHIPCHLDISRSA
Query: NHIDISTKLVSNQEPTQITCIEDHTPSQLDNSRCVDQ---LNISGHQNQNNSQIIQTLTPQEALS------LPDISNDMFVDFSIFAGSSMQTTNGDKQG
+H +T +S QI + P+++ N + + +++S Q ++ + ++ S +PD S + VD S QG
Subjt: NHIDISTKLVSNQEPTQITCIEDHTPSQLDNSRCVDQ---LNISGHQNQNNSQIIQTLTPQEALS------LPDISNDMFVDFSIFAGSSMQTTNGDKQG
Query: QQHNLKEKAPVEPHHMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTK
Q + K HM+TR K DP L S + ++ AT+ ++ EPK++++ LKIPHW AM+EE+KAL++N TWDLVP+P TNI+GSKW+FKTK
Subjt: QQHNLKEKAPVEPHHMVTRGKSAKDPQLYSTIHKKGHLSLIATKQEM-EPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTK
Query: LKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLK
LKEDG+I+RYKARLVA+G++Q+ GLD+ ETFSP++K TTIR++ ++AVT GWK+RQLDVKNAFLHG+LKEEVFM QPPGF + LP HVCKLNRSLYGLK
Subjt: LKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLK
Query: QAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYAR
QAPRAWF+RLSQ L+ GF C +D S FI + + +++LIYVDDIIVTGN + +LI LS EF+LKDLG HYFLG+EV + +G+ +SQ KY R
Subjt: QAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYAR
Query: DILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLK
D+L TKM+E + TPM+ + + D + ++ T+YR +VGSLQYLT TRPDI +AVNK CQ Q P DL+AVKRILRYL GT HGI F+K SSL+
Subjt: DILIKTKMIEASQYETPMSNYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLK
Query: LYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHART
L F DADW GC + RRST+GYCIFLGANCISW SK+QPT++RSS+EAEYR++A + AE+TW++F+L+DIGI + +PPQL CDN+SAL M++NPVFHAR+
Subjt: LYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHART
Query: KHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
KHIE+DYHFVRE+VA G+LITR++PS Q+ADI TK L K SF+ R KLGV
Subjt: KHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.0e-96 | 38.96 | Show/hide |
Query: WKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKN
W+ A+ E+ A N+TW + +P + NI+ S+W+F K E G+ RYKARLVA+G+TQ +DYEETF+P+ + ++ R +L++ + K+ Q+DVK
Subjt: WKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKN
Query: AFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEI--TMIMLIYVDDIIVTGNSEKHMEE
AFL+G LKEE++M P G S +VCKLN+++YGLKQA R WFE Q L + F S D +I I + +L+YVDD+++ M
Subjt: AFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEI--TMIMLIYVDDIIVTGNSEKHMEE
Query: LIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPM-SNYTSNCANDNELVNATEYRSIVGSLQYLTL-TRPDITYA
+ L +F + DL +F+GI + D I LSQ Y + IL K M + TP+ S N +E N T RS++G L Y+ L TRPD+T A
Subjt: LIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPM-SNYTSNCANDNELVNATEYRSIVGSLQYLTL-TRPDITYA
Query: VNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSL--KLYAFYDADWRGCPDIRRSTTGYCI-FLGANCISWKSKKQPTIARSSSEAEYRAMA
VN + + + + +KR+LRYL GT + + F KN + K+ + D+DW G R+STTGY N I W +K+Q ++A SS+EAEY A+
Subjt: VNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSL--KLYAFYDADWRGCPDIRRSTTGYCI-FLGANCISWKSKKQPTIARSSSEAEYRAMA
Query: ITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
E W+ F+L I I + P +++ DN + ++ NP H R KHI+I YHF RE+V ++ Y+P+++QLADI TKPL F +LR KLG+
Subjt: ITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-95 | 38.1 | Show/hide |
Query: IATKQEMEPKSFKSALKIP---HWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPT
+ + EP+S K L P AM+EEM++L +N T+ LV P + KW+FK K D + RYKARLV +G+ Q +G+D++E FSP+VK T
Subjt: IATKQEMEPKSFKSALKIP---HWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPT
Query: TIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEIT-
+IR +L++A + ++ QLDVK AFLHG L+EE++M QP GF+ VCKLN+SLYGLKQAPR W+ + F+ + ++SDP + + +E
Subjt: TIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEIT-
Query: MIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEV--HHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTS-------NCAND
+I+L+YVDD+++ G + + +L LS F +KDLGP LG+++ TS + LSQEKY +L + M A TP++ + +
Subjt: MIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEV--HHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTS-------NCAND
Query: NELVNATEYRSIVGSLQY-LTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLG
+ Y S VGSL Y + TRPDI +AV V + L+ P + +AVK ILRYL GTT + F + + L + DAD G D R+S+TGY
Subjt: NELVNATEYRSIVGSLQY-LTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLG
Query: ANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQ
ISW+SK Q +A S++EAEY A T E+ W+ L+++G+H + ++CD+ SA+ +S N ++HARTKHI++ YH++RE V L + +
Subjt: ANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQ
Query: DQLADILTKPLSKESFKKLRSKLGV
+ AD+LTK + + F+ + +G+
Subjt: DQLADILTKPLSKESFKKLRSKLGV
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 3.4e-64 | 51.54 | Show/hide |
Query: MIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEY
M +L+YVDDI++TG+S + LI +LS F++KDLGP HYFLGI++ G+ LSQ KYA IL M++ TP+ ++ + + + +++
Subjt: MIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEY
Query: RSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKK
RSIVG+LQYLTLTRPDI+YAVN VCQ++ P + D +KR+LRY+ GT HG+ +KNS L + AF D+DW GC RRSTTG+C FLG N ISW +K+
Subjt: RSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKK
Query: QPTIARSSSEAEYRAMAITTAELTWIS
QPT++RSS+E EYRA+A+T AELTW S
Subjt: QPTIARSSSEAEYRAMAITTAELTWIS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.9e-148 | 45 | Show/hide |
Query: ISRSANHIDISTKLVSNQEPT-------QITCIEDHTPSQLDNSRCVDQLNISGHQNQNNSQIIQTL-TP-QEALSLPDISNDMFVDFSIFAGSSMQTTN
+S S S+ S+ EPT Q T T +Q +S+ Q N + N++ SQ+ Q+L TP Q + S P + + S+
Subjt: ISRSANHIDISTKLVSNQEPT-------QITCIEDHTPSQLDNSRCVDQLNISGHQNQNNSQIIQTL-TP-QEALSLPDISNDMFVDFSIFAGSSMQTTN
Query: GDKQGQQHNLKEKAPVEPHHMVTRGKSA--KDPQLYSTIHKKGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLV-PKPSHTNIIGS
Q N +AP+ H M TR K+ K YS ++ E EP++ ALK W+ AM E+ A + NHTWDLV P PSH I+G
Subjt: GDKQGQQHNLKEKAPVEPHHMVTRGKSA--KDPQLYSTIHKKGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLV-PKPSHTNIIGS
Query: KWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLN
+WIF K DGS+ RYKARLVA+GY Q GLDY ETFSP++K T+IRIVL VAV W +RQLDV NAFL G L ++V+M+QPPGF P +VCKL
Subjt: KWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLN
Query: RSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIML
++LYGLKQAPRAW+ L +L+ GF S SD S F+ + + + ML+YVDDI++TGN + + LS F++KD HYFLGIE G+ L
Subjt: RSLYGLKQAPRAWFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIML
Query: SQEKYARDILIKTKMIEASQYETPMS-NYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGIS
SQ +Y D+L +T MI A TPM+ + + + +L + TEYR IVGSLQYL TRPDI+YAVN++ Q + P + L+A+KRILRYL GT NHGI
Subjt: SQEKYARDILIKTKMIEASQYETPMS-NYTSNCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGIS
Query: FYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSI
K ++L L+A+ DADW G D ST GY ++LG + ISW SKKQ + RSS+EAEYR++A T++E+ WI +L ++GI + +PP ++CDN+ A +
Subjt: FYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSI
Query: NPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
NPVFH+R KHI IDYHF+R +V G L +V + DQLAD LTKPLS+ +F+ SK+GV
Subjt: NPVFHARTKHIEIDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.8e-143 | 47.99 | Show/hide |
Query: KAPVEPHHMVTRGKSA--KDPQLYSTIHKKGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLV-PKPSHTNIIGSKWIFKTKLKEDG
+APV H M TR K K Q YS SL A EP++ A+K W+ AM E+ A + NHTWDLV P P I+G +WIF K DG
Subjt: KAPVEPHHMVTRGKSA--KDPQLYSTIHKKGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLV-PKPSHTNIIGSKWIFKTKLKEDG
Query: SIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRA
S+ RYKARLVA+GY Q GLDY ETFSP++K T+IRIVL VAV W +RQLDV NAFL G L +EV+M+QPPGF P +VC+L +++YGLKQAPRA
Subjt: SIERYKARLVAQGYTQVEGLDYEETFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGFQHPSLPQHVCKLNRSLYGLKQAPRA
Query: WFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIK
W+ L +L+ GF S SD S F+ + + ML+YVDDI++TGN ++ + LS F++K+ HYFLGIE G+ LSQ +Y D+L +
Subjt: WFERLSQFLVQTGFFCSHSDPSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIK
Query: TKMIEASQYETPMSNYTS-NCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAF
T M+ A TPM+ + +L + TEYR IVGSLQYL TRPD++YAVN++ Q + P A+KR+LRYL GT +HGI K ++L L+A+
Subjt: TKMIEASQYETPMSNYTS-NCANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAF
Query: YDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIE
DADW G D ST GY ++LG + ISW SKKQ + RSS+EAEYR++A T++EL WI +L ++GI + PP ++CDN+ A + NPVFH+R KHI
Subjt: YDADWRGCPDIRRSTTGYCIFLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIE
Query: IDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
+DYHF+R +V G L +V + DQLAD LTKPLS+ +F+ K+GV
Subjt: IDYHFVRERVALGLLITRYVPSQDQLADILTKPLSKESFKKLRSKLGV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.2e-120 | 43.15 | Show/hide |
Query: YSTIHKKGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEE
Y + H L+ + EP ++ A + W AM++E+ A+ HTW++ P + IG KW++K K DG+IERYKARLVA+GYTQ EG+D+ E
Subjt: YSTIHKKGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVAQGYTQVEGLDYEE
Query: TFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGF---QHPSLPQH-VCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSD
TFSP+ K T+++++LA++ + L QLD+ NAFL+G L EE++M PPG+ Q SLP + VC L +S+YGLKQA R WF + S L+ GF SHSD
Subjt: TFSPIVKPTTIRIVLAVAVTCGWKLRQLDVKNAFLHGYLKEEVFMAQPPGF---QHPSLPQH-VCKLNRSLYGLKQAPRAWFERLSQFLVQTGFFCSHSD
Query: PSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMS-NYTSN
++F+ T + + +L+YVDDII+ N++ ++EL +L F L+DLGP YFLG+E+ ++ GI + Q KYA D+L +T ++ PM + T +
Subjt: PSFFIFKTNEITMIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMS-NYTSN
Query: CANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCI
+ + V+A YR ++G L YL +TR DI++AVNK+ Q + PR+ +AV +IL Y+ GT G+ + + ++L F DA ++ C D RRST GYC+
Subjt: CANDNELVNATEYRSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCI
Query: FLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRER
FLG + ISWKSKKQ +++SS+EAEYRA++ T E+ W++ +++ + + +P LFCDN +A+ ++ N VFH RTKHIE D H VRER
Subjt: FLGANCISWKSKKQPTIARSSSEAEYRAMAITTAELTWISFVLKDIGIHMMQPPQLFCDNMSALRMSINPVFHARTKHIEIDYHFVRER
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 2.4e-17 | 46.59 | Show/hide |
Query: YLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCI-----FLGA
YLT+TRPD+T+AVN++ Q R ++AV ++L Y+ GT G+ + S L+L AF D+DW CPD RRS TG+C FLGA
Subjt: YLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCI-----FLGA
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 2.4e-65 | 51.54 | Show/hide |
Query: MIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEY
M +L+YVDDI++TG+S + LI +LS F++KDLGP HYFLGI++ G+ LSQ KYA IL M++ TP+ ++ + + + +++
Subjt: MIMLIYVDDIIVTGNSEKHMEELIQKLSIEFALKDLGPFHYFLGIEVHHTSDGIMLSQEKYARDILIKTKMIEASQYETPMSNYTSNCANDNELVNATEY
Query: RSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKK
RSIVG+LQYLTLTRPDI+YAVN VCQ++ P + D +KR+LRY+ GT HG+ +KNS L + AF D+DW GC RRSTTG+C FLG N ISW +K+
Subjt: RSIVGSLQYLTLTRPDITYAVNKVCQQLQTPRIKDLKAVKRILRYLNGTTNHGISFYKNSSLKLYAFYDADWRGCPDIRRSTTGYCIFLGANCISWKSKK
Query: QPTIARSSSEAEYRAMAITTAELTWIS
QPT++RSS+E EYRA+A+T AELTW S
Subjt: QPTIARSSSEAEYRAMAITTAELTWIS
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.9e-26 | 48.85 | Show/hide |
Query: MVTRGKSAKDPQLYSTIHKKGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVA
M+TR K+ + ++ K L+ I T + EPKS ALK P W AM+EE+ AL N TW LVP P + NI+G KW+FKTKL DG+++R KARLVA
Subjt: MVTRGKSAKDPQLYSTIHKKGHLSLIATKQEMEPKSFKSALKIPHWKAAMEEEMKALLENHTWDLVPKPSHTNIIGSKWIFKTKLKEDGSIERYKARLVA
Query: QGYTQVEGLDYEETFSPIVKPTTIRIVLAVA
+G+ Q EG+ + ET+SP+V+ TIR +L VA
Subjt: QGYTQVEGLDYEETFSPIVKPTTIRIVLAVA
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