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Sgr002009 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr002009
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptiontranscription initiation factor TFIID subunit 12
Genome locationtig00001266:5..1114
RNA-Seq ExpressionSgr002009
SyntenySgr002009
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0046695 - SLIK (SAGA-like) complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0017025 - TBP-class protein binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025267.1 transcription initiation factor TFIID subunit 12 [Cucumis melo var. makuwa]5.5e-4290.83Show/hide
Query:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ
        MQGMQGLGMLGSSGSSSQML RPVQ SLRPPST NSASQSFQGH LLRVPS SSPSSSLP+TSQ MQP+NQPWLPS+SQGKPPLPTPSYRPQANS AMQQ
Subjt:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ

Query:  RSHIPQQQN
        RSHIPQQQN
Subjt:  RSHIPQQQN
TYK07401.1 transcription initiation factor TFIID subunit 12 [Cucumis melo var. makuwa]5.5e-4290.83Show/hide
Query:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ
        MQGMQGLGMLGSSGSSSQML RPVQ SLRPPST NSASQSFQGH LLRVPS SSPSSSLP+TSQ MQP+NQPWLPS+SQGKPPLPTPSYRPQANS AMQQ
Subjt:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ

Query:  RSHIPQQQN
        RSHIPQQQN
Subjt:  RSHIPQQQN
XP_011657695.1 transcription initiation factor TFIID subunit 12 [Cucumis sativus]1.4e-4290.83Show/hide
Query:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ
        MQGMQGLGMLGSSGSSSQML RPVQ SLRPPST NSASQ+FQGH LLRVPS SSPSSSLP+TSQ MQP+NQPWLPS+SQGKPPLPTPSYRPQANSPAMQQ
Subjt:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ

Query:  RSHIPQQQN
        RSHIPQQQN
Subjt:  RSHIPQQQN
XP_022133029.1 transcription initiation factor TFIID subunit 12 [Momordica charantia]1.1e-4290.83Show/hide
Query:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ
        MQGMQGLGMLGSSGSSSQMLQRPVQ SLRPPST NSASQSFQGH LLRVPS +SPSSSLPSTSQ++QPSNQPWLPSTSQGKPPLP+PSYRPQANSP++QQ
Subjt:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ

Query:  RSHIPQQQN
        RSHIPQQQN
Subjt:  RSHIPQQQN
XP_038883059.1 transcription initiation factor TFIID subunit 12 [Benincasa hispida]8.4e-4391.74Show/hide
Query:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ
        MQGMQGLGMLGSSGSS QMLQRPVQ SLRPPST NSASQSFQGH LLRVPS SSPSSSLP+TSQ MQPSNQPWLPS+SQGKPPLPTPSYRPQ NSPAMQQ
Subjt:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ

Query:  RSHIPQQQN
        RSHIPQQQN
Subjt:  RSHIPQQQN
TrEMBL top hitse value%identityAlignment
A0A0A0KEX0 TFIID_20kDa domain-containing protein7.0e-4390.83Show/hide
Query:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ
        MQGMQGLGMLGSSGSSSQML RPVQ SLRPPST NSASQ+FQGH LLRVPS SSPSSSLP+TSQ MQP+NQPWLPS+SQGKPPLPTPSYRPQANSPAMQQ
Subjt:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ

Query:  RSHIPQQQN
        RSHIPQQQN
Subjt:  RSHIPQQQN
A0A1S3CHH3 transcription initiation factor TFIID subunit 122.6e-4290.83Show/hide
Query:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ
        MQGMQGLGMLGSSGSSSQML RPVQ SLRPPST NSASQSFQGH LLRVPS SSPSSSLP+TSQ MQP+NQPWLPS+SQGKPPLPTPSYRPQANS AMQQ
Subjt:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ

Query:  RSHIPQQQN
        RSHIPQQQN
Subjt:  RSHIPQQQN
A0A5A7SKM4 Transcription initiation factor TFIID subunit 122.6e-4290.83Show/hide
Query:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ
        MQGMQGLGMLGSSGSSSQML RPVQ SLRPPST NSASQSFQGH LLRVPS SSPSSSLP+TSQ MQP+NQPWLPS+SQGKPPLPTPSYRPQANS AMQQ
Subjt:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ

Query:  RSHIPQQQN
        RSHIPQQQN
Subjt:  RSHIPQQQN
A0A5D3C687 Transcription initiation factor TFIID subunit 122.6e-4290.83Show/hide
Query:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ
        MQGMQGLGMLGSSGSSSQML RPVQ SLRPPST NSASQSFQGH LLRVPS SSPSSSLP+TSQ MQP+NQPWLPS+SQGKPPLPTPSYRPQANS AMQQ
Subjt:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ

Query:  RSHIPQQQN
        RSHIPQQQN
Subjt:  RSHIPQQQN
A0A6J1BUS5 transcription initiation factor TFIID subunit 125.3e-4390.83Show/hide
Query:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ
        MQGMQGLGMLGSSGSSSQMLQRPVQ SLRPPST NSASQSFQGH LLRVPS +SPSSSLPSTSQ++QPSNQPWLPSTSQGKPPLP+PSYRPQANSP++QQ
Subjt:  MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQ

Query:  RSHIPQQQN
        RSHIPQQQN
Subjt:  RSHIPQQQN
SwissProt top hitse value%identityAlignment
Q9SR71 Transcription initiation factor TFIID subunit 121.6e-2358.82Show/hide
Query:  MQGMQGLGMLGSSGSSSQM--------LQRPVQPSLRP---PSTQNSASQSFQGHSLLRVPSASSPS-SSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPS
        MQG QG+GM+G+ GS SQ+         QRP Q SLRP    STQ+  +Q+FQGHSL+R    SSP+  S  ++ QS+Q  NQPWL ST QGKPPLP PS
Subjt:  MQGMQGLGMLGSSGSSSQM--------LQRPVQPSLRP---PSTQNSASQSFQGHSLLRVPSASSPS-SSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPS

Query:  YRPQANSPAMQQRSHIPQQ
        YRPQ NSP+MQQR HIPQQ
Subjt:  YRPQANSPAMQQRSHIPQQ
Arabidopsis top hitse value%identityAlignment
AT3G10070.1 TBP-associated factor 121.1e-2458.82Show/hide
Query:  MQGMQGLGMLGSSGSSSQM--------LQRPVQPSLRP---PSTQNSASQSFQGHSLLRVPSASSPS-SSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPS
        MQG QG+GM+G+ GS SQ+         QRP Q SLRP    STQ+  +Q+FQGHSL+R    SSP+  S  ++ QS+Q  NQPWL ST QGKPPLP PS
Subjt:  MQGMQGLGMLGSSGSSSQM--------LQRPVQPSLRP---PSTQNSASQSFQGHSLLRVPSASSPS-SSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPS

Query:  YRPQANSPAMQQRSHIPQQ
        YRPQ NSP+MQQR HIPQQ
Subjt:  YRPQANSPAMQQRSHIPQQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGAATGCAGGGATTGGGAATGTTGGGATCAAGTGGTTCTAGTTCTCAAATGCTGCAGAGGCCAGTGCAACCTTCCCTCAGGCCGCCATCTACCCAAAACTCAGC
TTCCCAAAGTTTCCAAGGCCATAGTCTTTTGAGAGTACCATCAGCAAGTTCTCCAAGTTCTTCATTGCCAAGTACATCACAAAGTATGCAACCCTCCAACCAGCCATGGT
TGCCATCTACTTCACAAGGAAAACCACCTCTTCCGACACCTTCATATAGACCACAGGCAAACTCACCTGCTATGCAGCAAAGGTCACATATCCCTCAACAACAGAACCCT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGAATGCAGGGATTGGGAATGTTGGGATCAAGTGGTTCTAGTTCTCAAATGCTGCAGAGGCCAGTGCAACCTTCCCTCAGGCCGCCATCTACCCAAAACTCAGC
TTCCCAAAGTTTCCAAGGCCATAGTCTTTTGAGAGTACCATCAGCAAGTTCTCCAAGTTCTTCATTGCCAAGTACATCACAAAGTATGCAACCCTCCAACCAGCCATGGT
TGCCATCTACTTCACAAGGAAAACCACCTCTTCCGACACCTTCATATAGACCACAGGCAAACTCACCTGCTATGCAGCAAAGGTCACATATCCCTCAACAACAGAACCCT
TAG
Protein sequenceShow/hide protein sequence
MQGMQGLGMLGSSGSSSQMLQRPVQPSLRPPSTQNSASQSFQGHSLLRVPSASSPSSSLPSTSQSMQPSNQPWLPSTSQGKPPLPTPSYRPQANSPAMQQRSHIPQQQNP