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Sgr003832 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr003832
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionpolygalacturonase-like
Genome locationtig00002455:21716..22012
RNA-Seq ExpressionSgr003832
SyntenySgr003832
Gene Ontology termsNA
InterPro domainsIPR011050 - Pectin lyase fold/virulence factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590113.1 hypothetical protein SDJN03_15536, partial [Cucurbita argyrosperma subsp. sororia]9.0e-0445.45Show/hide
Query:  MAKRSNTSLL----RPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI
        MAK SN S L    +P+  +L ++F + L ++TS+ ATL N+LDFGA    G DS+ AF  AW +AC S EST   +
Subjt:  MAKRSNTSLL----RPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI

KAG7023779.1 hypothetical protein SDJN02_14805, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-0446.75Show/hide
Query:  MAKRSNTSLL----RPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI
        MAK SN S L    +P+  +L ++F + L ++TS+ ATL N+LDFGA    G DSS AF  AW +AC S EST   +
Subjt:  MAKRSNTSLL----RPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI

XP_022150002.1 polygalacturonase-like [Momordica charantia]1.4e-0450.68Show/hide
Query:  MAKRSNTSLLRPWLLRMIFIVRL--RVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI
        MAK S+T  L P LL  IF++ L   +S SH ATL NVLDFG RH   GD ++ F  AW  AC+S ES    I
Subjt:  MAKRSNTSLLRPWLLRMIFIVRL--RVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI

XP_022960566.1 polygalacturonase-like [Cucurbita moschata]5.3e-0446.75Show/hide
Query:  MAKRSNTSLL----RPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI
        MAK SN S L    +P+  +L ++F++   ++ S+ ATL NVLDFGA H  G DSS AF  AW +AC S EST   +
Subjt:  MAKRSNTSLL----RPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI

XP_022987940.1 polygalacturonase-like [Cucurbita maxima]2.4e-0448.05Show/hide
Query:  MAKRSN----TSLLRPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI
        MAK SN     S  +P+  +L ++F +   ++TSH ATL NVLDFGA    G DSS AF  AW +ACTS EST   +
Subjt:  MAKRSN----TSLLRPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI

TrEMBL top hitse value%identityAlignment
A0A6J1D9I8 polygalacturonase-like6.7e-0550.68Show/hide
Query:  MAKRSNTSLLRPWLLRMIFIVRL--RVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI
        MAK S+T  L P LL  IF++ L   +S SH ATL NVLDFG RH   GD ++ F  AW  AC+S ES    I
Subjt:  MAKRSNTSLLRPWLLRMIFIVRL--RVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI

A0A6J1H7Y9 polygalacturonase-like2.5e-0446.75Show/hide
Query:  MAKRSNTSLL----RPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI
        MAK SN S L    +P+  +L ++F++   ++ S+ ATL NVLDFGA H  G DSS AF  AW +AC S EST   +
Subjt:  MAKRSNTSLL----RPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI

A0A6J1JI71 polygalacturonase-like1.1e-0448.05Show/hide
Query:  MAKRSN----TSLLRPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI
        MAK SN     S  +P+  +L ++F +   ++TSH ATL NVLDFGA    G DSS AF  AW +ACTS EST   +
Subjt:  MAKRSN----TSLLRPW--LLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAACGTTCCAATACTTCATTACTTCGCCCATGGCTTTTGCGAATGATCTTCATCGTCCGCCTCCGTGTCTCCACATCGCACGTTGCAACTCTACCGAACGTTTT
GGATTTCGGCGCCAGACACAACGATGGAGGAGATTCTAGCTTGGCCTTCTGCTACGCGTGGGAGGAGGCTTGTACGTCGTTGGAGTCCACAACGGCTGTGATAATGGCGA
CGTCACTTTCCACATCGACGAAACTCTGGTTGCACCGATTGATTACCGAATTCTTGGTGAAGTTGATAGTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAACGTTCCAATACTTCATTACTTCGCCCATGGCTTTTGCGAATGATCTTCATCGTCCGCCTCCGTGTCTCCACATCGCACGTTGCAACTCTACCGAACGTTTT
GGATTTCGGCGCCAGACACAACGATGGAGGAGATTCTAGCTTGGCCTTCTGCTACGCGTGGGAGGAGGCTTGTACGTCGTTGGAGTCCACAACGGCTGTGATAATGGCGA
CGTCACTTTCCACATCGACGAAACTCTGGTTGCACCGATTGATTACCGAATTCTTGGTGAAGTTGATAGTTGGCTGA
Protein sequenceShow/hide protein sequence
MAKRSNTSLLRPWLLRMIFIVRLRVSTSHVATLPNVLDFGARHNDGGDSSLAFCYAWEEACTSLESTTAVIMATSLSTSTKLWLHRLITEFLVKLIVG