| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN67403.1 hypothetical protein VITISV_025614 [Vitis vinifera] | 2.5e-15 | 32.7 | Show/hide |
Query: VNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG------------------------
V N+F+SYL++HGI Q SC YTPEQNG + +++ L+L++ + LP KFW Y F T +FLINRLP+ +L
Subjt: VNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG------------------------
Query: ------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--PLA
GY+C N G+ Y+ H +F E +FPF S+ S S +P FLP S +S S PS S PL
Subjt: ------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--PLA
Query: NCDTAATISSP
N ++TIS P
Subjt: NCDTAATISSP
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| CAN68489.1 hypothetical protein VITISV_037543 [Vitis vinifera] | 1.2e-14 | 31.9 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
GEF +F+SYL++HGI Q SC YTPEQNG + +++ L+L++ + LP KFW Y F TA+FLINRLP+ +L
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
Query: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDSLSQFTSGLLPSVSPLAN
GY+C N G+ Y+ H +F E +FPF S+ S S +P FLP S P VS L +
Subjt: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDSLSQFTSGLLPSVSPLAN
Query: CDTAATISSP
T +T S P
Subjt: CDTAATISSP
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| CAN79148.1 hypothetical protein VITISV_004343 [Vitis vinifera] | 1.0e-13 | 31.25 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSIL----------------------
GEF+ +F YL +HGILHQ SC +TP+QNG I L++ L+LM++S+LP+K+W+Y F TA++LIN LP+ +L
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSIL----------------------
Query: --------------------------------GGYLCYNMSNGKFYIPHHAIFDENLFPFASSSSFSFYQLPFVLFLPNDSLSQFTSGLLPSVSPLANCD
GYLC ++S + YI + IF E+ FPF SSS S P+ L T L+ SP +
Subjt: --------------------------------GGYLCYNMSNGKFYIPHHAIFDENLFPFASSSSFSFYQLPFVLFLPNDSLSQFTSGLLPSVSPLANCD
Query: TAATISSP
++ +SSP
Subjt: TAATISSP
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| RVW64314.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 5.6e-15 | 33.18 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
GEF +F+SYL++HGI Q SC YTPEQNG + +++ L+L++ + LP KFW Y F TA+FLINRLP+ +L
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
Query: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--
GY+C N G+ Y+ H +F E +FPF S+ S S +P FLP S +S S PS S
Subjt: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--
Query: PLANCDTAATISSP
PL N ++TIS P
Subjt: PLANCDTAATISSP
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| RVX06084.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.6e-14 | 32.71 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
GEF +F+SYL++HGI Q SC YTPEQNG + +++ L+L++ + LP KFW Y F T +FLINRLP+ +L
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
Query: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--
GY+C N G+ Y+ H +F E +FPF S+ S S +P FLP S +S S PS S
Subjt: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--
Query: PLANCDTAATISSP
PL N ++TIS P
Subjt: PLANCDTAATISSP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438FWJ3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.7e-15 | 33.18 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
GEF +F+SYL++HGI Q SC YTPEQNG + +++ L+L++ + LP KFW Y F TA+FLINRLP+ +L
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
Query: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--
GY+C N G+ Y+ H +F E +FPF S+ S S +P FLP S +S S PS S
Subjt: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--
Query: PLANCDTAATISSP
PL N ++TIS P
Subjt: PLANCDTAATISSP
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| A0A438JAU4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.8e-15 | 32.71 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
GEF +F+SYL++HGI Q SC YTPEQNG + +++ L+L++ + LP KFW Y F T +FLINRLP+ +L
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
Query: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--
GY+C N G+ Y+ H +F E +FPF S+ S S +P FLP S +S S PS S
Subjt: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--
Query: PLANCDTAATISSP
PL N ++TIS P
Subjt: PLANCDTAATISSP
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| A5AYB0 Integrase catalytic domain-containing protein | 5.1e-14 | 31.25 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSIL----------------------
GEF+ +F YL +HGILHQ SC +TP+QNG I L++ L+LM++S+LP+K+W+Y F TA++LIN LP+ +L
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSIL----------------------
Query: --------------------------------GGYLCYNMSNGKFYIPHHAIFDENLFPFASSSSFSFYQLPFVLFLPNDSLSQFTSGLLPSVSPLANCD
GYLC ++S + YI + IF E+ FPF SSS S P+ L T L+ SP +
Subjt: --------------------------------GGYLCYNMSNGKFYIPHHAIFDENLFPFASSSSFSFYQLPFVLFLPNDSLSQFTSGLLPSVSPLANCD
Query: TAATISSP
++ +SSP
Subjt: TAATISSP
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| A5B1N8 Integrase catalytic domain-containing protein | 1.2e-15 | 32.7 | Show/hide |
Query: VNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG------------------------
V N+F+SYL++HGI Q SC YTPEQNG + +++ L+L++ + LP KFW Y F T +FLINRLP+ +L
Subjt: VNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG------------------------
Query: ------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--PLA
GY+C N G+ Y+ H +F E +FPF S+ S S +P FLP S +S S PS S PL
Subjt: ------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDS--LSQFTSGLLPSVS--PLA
Query: NCDTAATISSP
N ++TIS P
Subjt: NCDTAATISSP
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| A5C001 Integrase catalytic domain-containing protein | 6.0e-15 | 31.9 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
GEF +F+SYL++HGI Q SC YTPEQNG + +++ L+L++ + LP KFW Y F TA+FLINRLP+ +L
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSILG---------------------
Query: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDSLSQFTSGLLPSVSPLAN
GY+C N G+ Y+ H +F E +FPF S+ S S +P FLP S P VS L +
Subjt: ---------------------------------GYLCYNMSNGKFYIPHHAIFDENLFPFASS--SSFSFYQLPFVLFLPNDSLSQFTSGLLPSVSPLAN
Query: CDTAATISSP
T +T S P
Subjt: CDTAATISSP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.1e-04 | 27.48 | Show/hide |
Query: EFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSIL--GGYLCYNM-SNGKFYIPHHAI
E+++N + GI + + +TP+ NG I T+ ++ A +++S + L FW TA +LINR+PS L Y M N K Y+ H +
Subjt: EFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSIL--GGYLCYNM-SNGKFYIPHHAI
Query: FDENLFPFASSSSFSF----YQLPFVLFLPN
F ++ + F ++ FV + PN
Subjt: FDENLFPFASSSSFSF----YQLPFVLFLPN
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.8e-08 | 38.67 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPS
GE+ + F Y SSHGI H+K+ TP+ NG T++++ S++ + LP FW TA +LINR PS
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.5e-10 | 27.16 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSIL----------------------
GEFV + Y S HGI H S +TPE NG +++ L+L+S + +P +W Y F A++LINRLP+ +L
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSIL----------------------
Query: --------------------------------GGYLCYNMSNGKFYIPHHAIFDENLFPFAS
YLC ++ + YI H FDEN FPF++
Subjt: --------------------------------GGYLCYNMSNGKFYIPHHAIFDENLFPFAS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.8e-09 | 26.83 | Show/hide |
Query: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSIL----------------------
GEFV YLS HGI H S +TPE NG +++ L+L+S + +P +W Y F A++LINRLP+ +L
Subjt: GEFVNNSFASYLSSHGILHQKSCAYTPEQNGWPNASIATLLKREALSLMSKSYLPTKFWSYTFGTAMFLINRLPSSIL----------------------
Query: --------------------------------GGYLCYNMSNGKFYIPHHAIFDENLFPFASSS
YLC ++ G+ Y H FDE FPF++++
Subjt: --------------------------------GGYLCYNMSNGKFYIPHHAIFDENLFPFASSS
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