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Sgr004914 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr004914
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionWD-40 repeat-containing protein MSI2-like
Genome locationtig00003426:44765..45170
RNA-Seq ExpressionSgr004914
SyntenySgr004914
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589011.1 WD-40 repeat-containing protein MSI2, partial [Cucurbita argyrosperma subsp. sororia]9.8e-1662.67Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF
        SSDTTVGLFDLRKL +PLHVLSSHT                       RLMVWDLN++GNEQDGDAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF

KAG7015274.1 WD-40 repeat-containing protein MSI2 [Cucurbita argyrosperma subsp. argyrosperma]9.8e-1662.67Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF
        SSDTTVGLFDLRKL +PLHVLSSHT                       RLMVWDLN++GNEQDGDAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF

XP_022928345.1 WD-40 repeat-containing protein MSI2-like [Cucurbita moschata]9.8e-1662.67Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF
        SSDTTVGLFDLRKL +PLHVLSSHT                       RLMVWDLN++GNEQDGDAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF

XP_022989054.1 WD-40 repeat-containing protein MSI2-like [Cucurbita maxima]9.8e-1662.67Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF
        SSDTTVGLFDLRKL +PLHVLSSHT                       RLMVWDLN++GNEQDGDAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF

XP_023529712.1 WD-40 repeat-containing protein MSI2-like [Cucurbita pepo subsp. pepo]9.8e-1662.67Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF
        SSDTTVGLFDLRKL +PLHVLSSHT                       RLMVWDLN++GNEQDGDAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF

TrEMBL top hitse value%identityAlignment
A0A0A0K5Y7 WD_REPEATS_REGION domain-containing protein6.2e-1662.67Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF
        SSDTTVGLFDLRKL +PLH LSSHT                       RLMVWDLN+IGNEQDGDAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF

A0A5D3CLS5 WD-40 repeat-containing protein MSI2-like1.4e-1561.33Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF
        SSDTTVGLFDLR+L +PLH LSSHT                       RLMVWDLN+IGNEQDGDAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF

A0A6J1ERG6 WD-40 repeat-containing protein MSI2-like4.8e-1662.67Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF
        SSDTTVGLFDLRKL +PLHVLSSHT                       RLMVWDLN++GNEQDGDAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF

A0A6J1I028 WD-40 repeat-containing protein MSI2-like1.1e-1562.67Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF
        SSDTTVGLFDLRKL +PLHVLSSHT                       RLMVWDLNSIG+EQDG+AEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF

A0A6J1JNA2 WD-40 repeat-containing protein MSI2-like4.8e-1662.67Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF
        SSDTTVGLFDLRKL +PLHVLSSHT                       RLMVWDLN++GNEQDGDAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQDGDAEDGPPELVF

SwissProt top hitse value%identityAlignment
O22466 WD-40 repeat-containing protein MSI17.8e-0844.74Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQ-DGDAEDGPPELVF
        S+D TV LFDLRK+   LH L  H                        RLMVWDL+ I  EQ   DAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQ-DGDAEDGPPELVF

O22467 Histone-binding protein MSI13.5e-0846.05Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQD-GDAEDGPPELVF
        S+D TV LFDLRKL   LH   SH                        RLMVWDL+ I  EQ   DAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQD-GDAEDGPPELVF

O22468 WD-40 repeat-containing protein MSI23.1e-1251.28Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQ---DGDAEDGPPELVF
        SSD+TV LFDLRKL  PLHV+SSH                        RLMVWDLN +G EQ   + DAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQ---DGDAEDGPPELVF

O22469 WD-40 repeat-containing protein MSI31.2e-1150Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQ---DGDAEDGPPELVF
        SSD+TV LFDLRKL  PLHVLS H                        RLMVWD+N +G+EQ   + DAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQ---DGDAEDGPPELVF

Q4P553 Histone acetyltransferase type B subunit 27.8e-0843.42Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQ-DGDAEDGPPELVF
        SSD +VG++DLR L   LH L SHT                       R+ +WDL+ IG EQ   DAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSHT-----------------------RLMVWDLNSIGNEQ-DGDAEDGPPELVF

Arabidopsis top hitse value%identityAlignment
AT2G16780.1 Transducin family protein / WD-40 repeat family protein2.2e-1351.28Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQ---DGDAEDGPPELVF
        SSD+TV LFDLRKL  PLHV+SSH                        RLMVWDLN +G EQ   + DAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQ---DGDAEDGPPELVF

AT4G35050.1 Transducin family protein / WD-40 repeat family protein8.3e-1350Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQ---DGDAEDGPPELVF
        SSD+TV LFDLRKL  PLHVLS H                        RLMVWD+N +G+EQ   + DAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQ---DGDAEDGPPELVF

AT5G58230.1 Transducin/WD40 repeat-like superfamily protein2.5e-0946.05Show/hide
Query:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQD-GDAEDGPPELVF
        S+D TV LFDLRKL   LH   SH                        RLMVWDL+ I  EQ   DAEDGPPEL+F
Subjt:  SSDTTVGLFDLRKLGQPLHVLSSH-----------------------TRLMVWDLNSIGNEQD-GDAEDGPPELVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATCATCGGACACTACCGTGGGTCTATTTGATCTACGAAAGCTTGGTCAGCCGCTACACGTTCTTAGCAGTCACACAAGGTTGATGGTGTGGGATCTGAACAGCATAGGA
AATGAGCAAGATGGAGATGCAGAAGATGGGCCTCCGGAACTGGTGTTTCACATGGAGGTCACAAGGCTAAAATATCAGACTTCAGCTGGAACAGAGATGAGCCATGGGTG
A
mRNA sequenceShow/hide mRNA sequence
CATCATCGGACACTACCGTGGGTCTATTTGATCTACGAAAGCTTGGTCAGCCGCTACACGTTCTTAGCAGTCACACAAGGTTGATGGTGTGGGATCTGAACAGCATAGGA
AATGAGCAAGATGGAGATGCAGAAGATGGGCCTCCGGAACTGGTGTTTCACATGGAGGTCACAAGGCTAAAATATCAGACTTCAGCTGGAACAGAGATGAGCCATGGGTG
A
Protein sequenceShow/hide protein sequence
SSDTTVGLFDLRKLGQPLHVLSSHTRLMVWDLNSIGNEQDGDAEDGPPELVFHMEVTRLKYQTSAGTEMSHG