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Sgr006051 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr006051
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description30S ribosomal protein 3, chloroplastic
Genome locationtig00004334:9136..9373
RNA-Seq ExpressionSgr006051
SyntenySgr006051
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
InterPro domainsIPR006924 - Ribosomal protein PSRP-3/Ycf65
IPR038447 - PSRP-3/Ycf65 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063423.1 30S ribosomal protein 3 [Cucumis melo var. makuwa]9.2e-39100Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

KAF3443896.1 hypothetical protein FNV43_RR13586 [Rhamnella rubrinervis]9.2e-39100Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

KGN57759.2 hypothetical protein Csa_011376 [Cucumis sativus]9.2e-39100Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

XP_008461583.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis melo]9.2e-39100Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

XP_038875586.1 30S ribosomal protein 3, chloroplastic-like [Benincasa hispida]9.2e-39100Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

TrEMBL top hitse value%identityAlignment
A0A0A0L9T8 Uncharacterized protein4.4e-39100Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

A0A1S3CF24 30S ribosomal protein 3, chloroplastic-like4.4e-39100Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

A0A2P6S346 Putative ribosomal protein PSRP-3/Ycf651.3e-3898.73Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        MEKPRLVLKFIWMEKNIGIALDQMIPGHG+IPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

A0A5D3CJH0 30S ribosomal protein 34.4e-39100Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

A0A6J1K853 30S ribosomal protein 3, chloroplastic-like1.3e-3898.73Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        MEKPRLVLKFIWMEKNIGI LDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

SwissProt top hitse value%identityAlignment
O48609 30S ribosomal protein 3, chloroplastic1.1e-3485.9Show/hide
Query:  EKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        + P LVLKFIWMEKNIGIALDQM+PG G+IPLSPYYFWPRKDAWEEL+  LE K WISQKQMIILLNQATDIINLWQQ
Subjt:  EKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

P51351 Probable 30S ribosomal protein 3, chloroplastic2.4e-2157.33Show/hide
Query:  RLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        +  LK +W+E NI IA+DQ++ G+GT PL+ Y+FWPR DAWEELK  LESKPWI+++  I LLN+ T++IN WQ+
Subjt:  RLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

P82412 30S ribosomal protein 3, chloroplastic6.6e-4093.67Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        M+KPRLVLKFIWMEKNIG+ALDQ IPGHGT+PLSPYYFWPRKDAWEELKVLLE+KPWISQKQMIILLNQATDIINLWQQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

Q9LFV0 30S ribosomal protein 3-2, chloroplastic9.2e-3479.49Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ
        +EKP++VLKF+WM+K+IG+ALD MIPG GTIPLSPYYFWPRKDAWEELK LLESKPWIS+   + LLNQATDIINLWQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ

Q9SX22 30S ribosomal protein 3-1, chloroplastic1.3e-3584.62Show/hide
Query:  EKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        EK R+VLKF+WMEKNIG+ LDQ +PGHGTIPLSPY+FWPRKDAWEELK  LE+KPWISQK+MIILLNQATDIINLWQQ
Subjt:  EKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

Arabidopsis top hitse value%identityAlignment
AT1G68590.1 Ribosomal protein PSRP-3/Ycf659.1e-3784.62Show/hide
Query:  EKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        EK R+VLKF+WMEKNIG+ LDQ +PGHGTIPLSPY+FWPRKDAWEELK  LE+KPWISQK+MIILLNQATDIINLWQQ
Subjt:  EKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

AT1G68590.2 Ribosomal protein PSRP-3/Ycf659.1e-3784.62Show/hide
Query:  EKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ
        EK R+VLKF+WMEKNIG+ LDQ +PGHGTIPLSPY+FWPRKDAWEELK  LE+KPWISQK+MIILLNQATDIINLWQQ
Subjt:  EKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ

AT5G15760.1 Ribosomal protein PSRP-3/Ycf656.6e-3579.49Show/hide
Query:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ
        +EKP++VLKF+WM+K+IG+ALD MIPG GTIPLSPYYFWPRKDAWEELK LLESKPWIS+   + LLNQATDIINLWQ
Subjt:  MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGCCGAGGCTTGTGCTAAAGTTCATATGGATGGAGAAAAACATTGGTATTGCACTTGACCAGATGATTCCTGGTCATGGTACTATTCCTCTTAGCCCATACTA
CTTTTGGCCTCGGAAAGATGCCTGGGAAGAGCTCAAAGTTTTACTTGAGAGCAAGCCCTGGATTTCCCAAAAGCAGATGATTATCCTTCTTAATCAGGCAACTGATATCA
TCAATTTGTGGCAGCAGG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAGCCGAGGCTTGTGCTAAAGTTCATATGGATGGAGAAAAACATTGGTATTGCACTTGACCAGATGATTCCTGGTCATGGTACTATTCCTCTTAGCCCATACTA
CTTTTGGCCTCGGAAAGATGCCTGGGAAGAGCTCAAAGTTTTACTTGAGAGCAAGCCCTGGATTTCCCAAAAGCAGATGATTATCCTTCTTAATCAGGCAACTGATATCA
TCAATTTGTGGCAGCAGG
Protein sequenceShow/hide protein sequence
MEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQX