| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004138895.1 DNA-directed RNA polymerases II, IV and V subunit 3 [Cucumis sativus] | 1.2e-169 | 95.94 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFP VKIRELRDDYAKFELR+TDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEKR+WVESCPTRVFE+D THQV++VDPEAYTYDDEVIKKAEAMGK GLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_008441761.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucumis melo] | 2.0e-169 | 95.62 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFP VKIRELRDDYAKFELR+TDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVESCPTRVFE+DP THQV++V+PEAYTYDDEVIKKAEAMGK GLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_022147788.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Momordica charantia] | 7.3e-172 | 97.19 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFP VKIRELRDDYAKFELR+TDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDL SSDHTVVPVDF+DSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEE+++WVESCPTRVFEVDPNTHQVV+VDPEAYTYDDEVIKKAEAMGK GLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_022927752.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucurbita moschata] | 6.4e-168 | 95.31 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFP VKIRELRDDYAKFEL +TD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK SWVES PT+VFE+DP THQV++VDPEAYTYDDEVIKKAEAMGK GLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_038891253.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Benincasa hispida] | 1.1e-167 | 95 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFP VKIRELRDDYAKFELR+TDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCH+DQTLDVTSKDLYSSDHTVVPVDFSDSAAA+GE LD+KGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LM+TLT EEKR+WVESCPTRVFE D THQV +VDPEAYTYDDEVIKKAEAMGK GLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LHS1 RPOLD domain-containing protein | 5.7e-170 | 95.94 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFP VKIRELRDDYAKFELR+TDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEKR+WVESCPTRVFE+D THQV++VDPEAYTYDDEVIKKAEAMGK GLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A1S3B3P9 LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like | 9.7e-170 | 95.62 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFP VKIRELRDDYAKFELR+TDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVESCPTRVFE+DP THQV++V+PEAYTYDDEVIKKAEAMGK GLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1D221 DNA-directed RNA polymerases II, IV and V subunit 3-like | 3.6e-172 | 97.19 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFP VKIRELRDDYAKFELR+TDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVTSKDL SSDHTVVPVDF+DSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEE+++WVESCPTRVFEVDPNTHQVV+VDPEAYTYDDEVIKKAEAMGK GLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1ELW4 DNA-directed RNA polymerases II, IV and V subunit 3-like | 3.1e-168 | 95.31 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFP VKIRELRDDYAKFEL +TD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK SWVES PT+VFE+DP THQV++VDPEAYTYDDEVIKKAEAMGK GLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1JIE7 DNA-directed RNA polymerases II, IV and V subunit 3-like | 3.1e-168 | 95.31 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFP VKIRELRDDYAKFEL +TD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK SWVES PT+VFE+DP THQV++VDPEAYTYDDEVIKKAEAMGK GLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P97760 DNA-directed RNA polymerase II subunit RPB3 | 8.2e-49 | 41.03 | Show/hide |
Query: YQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL ++ KF + TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
EF L +C+ DQT VTS+DL S+ V+PV + + ++ I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P ++ +
Subjt: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
Query: LTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKL
+ W +S E+D +DE + GKP + F + VES G+++ ++L+A+ LK+KL
Subjt: LTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKL
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| Q39211 DNA-directed RNA polymerases II, IV and V subunit 3 | 1.3e-147 | 82.5 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+GA+YQRFP +KIREL+DDYAKFELRETD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L +KC +DQTLDVTS+DLYS+D TV PVDF+ ++ S + + KGIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP I INED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M+TL+ EEK +ES PT+VF +DP T QVV+VDPEAYTYD+EVIKKAEAMGKPGL++I+ K+DSFIFTVESTGA+KASQL+LNAID+LKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| Q39212 DNA-directed RNA polymerases IV and V subunit 3B | 1.4e-136 | 77.19 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELRETD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ +++ S + + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M TLT EEK +ES PT+VF +DP T QVV+VDPEAYTYD+EVIKKAEAMGKPGL++I K DSF+FTVESTGA+KASQL+LNAIDILKQKLDA+RLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
D+TVEADDQFGELGAHMR G
Subjt: DDTVEADDQFGELGAHMRGG
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| Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 | 2.8e-49 | 41.38 | Show/hide |
Query: YQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL D+ KF + TD ++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
EF L +C+ DQT VTS+DL S+ V+PV + + ++ I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P ++ +
Subjt: EFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
Query: LTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKL
+ W +S E+D +DE + GKP + F + VES G+++ ++L+A+ LK+KL
Subjt: LTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKL
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| Q54DH7 DNA-directed RNA polymerase II subunit rpb3 | 2.6e-71 | 49.83 | Show/hide |
Query: RFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFH
R P ++I E+++D F L TD S+ANALRRVMIAEVPT+ IDLVE E N+SVL DEFIAHRLGLIPL S+ ++RDC D +C+ CSVE
Subjt: RFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFH
Query: LRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTL
L KC ++ DVTS DL S + V+PV +++ S + I IVKLRRGQE++LRAIA+KG+GK+HAKWSP+ T+ ++P I +N++ ++ LT
Subjt: LRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTL
Query: EEKRSWVESCPTRVFEVDP--NTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVR
++K WV SCPT+V+ P +T QV + DP Y E KKAE+ GKP LV + K+D FIFTVES+GA+K ++L AI I+K+KL ++
Subjt: EEKRSWVESCPTRVFEVDP--NTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60850.1 DNA-directed RNA polymerase family protein | 3.3e-29 | 29.78 | Show/hide |
Query: GASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G Y F V + L +F++ DA+ ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVPVDFSDSAAASGEVLDTKG---------IIIVKLRRGQELRLRAIARKGIGKDHAKW
++ F L KC ++ L V + DL S + T P ++ + + + + I+I KL GQE+ L A A KGIGK HAKW
Subjt: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVPVDFSDSAAASGEVLDTKG---------IIIVKLRRGQELRLRAIARKGIGKDHAKW
Query: SPAATVTFMYEPSIHINEDLMETLTLEEKRSWVESCPTRVFEVD---PNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIK
SP T + P + + ++ + L V CP VF+++ + + P T E ++ + + VD+ + ++ FIF +ESTG++
Subjt: SPAATVTFMYEPSIHINEDLMETLTLEEKRSWVESCPTRVFEVD---PNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIK
Query: ASQLILNAIDILKQKLDAV
L A+ IL+ K +A+
Subjt: ASQLILNAIDILKQKLDAV
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| AT1G60850.2 DNA-directed RNA polymerase family protein | 3.3e-29 | 29.78 | Show/hide |
Query: GASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G Y F V + L +F++ DA+ ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVPVDFSDSAAASGEVLDTKG---------IIIVKLRRGQELRLRAIARKGIGKDHAKW
++ F L KC ++ L V + DL S + T P ++ + + + + I+I KL GQE+ L A A KGIGK HAKW
Subjt: SVEFHLRAKCHSDQ-TLDVTSKDL-----------YSSDHTVVPVDFSDSAAASGEVLDTKG---------IIIVKLRRGQELRLRAIARKGIGKDHAKW
Query: SPAATVTFMYEPSIHINEDLMETLTLEEKRSWVESCPTRVFEVD---PNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIK
SP T + P + + ++ + L V CP VF+++ + + P T E ++ + + VD+ + ++ FIF +ESTG++
Subjt: SPAATVTFMYEPSIHINEDLMETLTLEEKRSWVESCPTRVFEVD---PNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIK
Query: ASQLILNAIDILKQKLDAV
L A+ IL+ K +A+
Subjt: ASQLILNAIDILKQKLDAV
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| AT2G15400.1 DNA-directed RNA polymerase family protein | 9.7e-138 | 77.19 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELRETD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ +++ S + + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M TLT EEK +ES PT+VF +DP T QVV+VDPEAYTYD+EVIKKAEAMGKPGL++I K DSF+FTVESTGA+KASQL+LNAIDILKQKLDA+RLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
D+TVEADDQFGELGAHMR G
Subjt: DDTVEADDQFGELGAHMRGG
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| AT2G15400.2 DNA-directed RNA polymerase family protein | 1.2e-92 | 74.03 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFELRETD SMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDVTS+DLYS+D TV PVDF+ +++ S + + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQV
+M TLT EEK +ES PT+VF +DP T QV
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQV
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| AT2G15430.1 DNA-directed RNA polymerase family protein | 9.3e-149 | 82.5 | Show/hide |
Query: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+GA+YQRFP +KIREL+DDYAKFELRETD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPNVKIRELRDDYAKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L +KC +DQTLDVTS+DLYS+D TV PVDF+ ++ S + + KGIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP I INED
Subjt: FCSVEFHLRAKCHSDQTLDVTSKDLYSSDHTVVPVDFSDSAAASGEVLDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M+TL+ EEK +ES PT+VF +DP T QVV+VDPEAYTYD+EVIKKAEAMGKPGL++I+ K+DSFIFTVESTGA+KASQL+LNAID+LKQKLDAVRLS
Subjt: LMETLTLEEKRSWVESCPTRVFEVDPNTHQVVMVDPEAYTYDDEVIKKAEAMGKPGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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