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Sgr007565 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr007565
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionPre-mRNA-splicing factor SLU7
Genome locationtig00005768:27154..41219
RNA-Seq ExpressionSgr007565
SyntenySgr007565
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0000386 - second spliceosomal transesterification activity (molecular function)
GO:0030628 - pre-mRNA 3'-splice site binding (molecular function)
InterPro domainsIPR021715 - Pre-mRNA-splicing factor SLU7 domain
IPR039974 - Pre-mRNA-splicing factor SLU7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3776255.1 Pre-mRNA-splicing factor [Nymphaea thermarum]2.9e-0935.29Show/hide
Query:  GQEINPHVPQYMSSAPWCLNAQ------------------------------------------------------------------------------
        G+EINPH+PQYMSSAPW LNA+                                                                              
Subjt:  GQEINPHVPQYMSSAPWCLNAQ------------------------------------------------------------------------------

Query:  TETSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
          T GGSTGTVRNLRIRED A+YLLNLDVN+AHYDP
Subjt:  TETSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

KAF7141181.1 hypothetical protein RHSIM_Rhsim06G0149800 [Rhododendron simsii]2.4e-1132.01Show/hide
Query:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDPILMVI-----------------------------IKLESVGSMHMFEK-HLIKVKI--SMCKLLH-
        T GGSTGTVRNLRIRED A+YLLNLDVN+AHYDP    +                              K  ++ +   F+K H + ++   S  +LL+ 
Subjt:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDPILMVI-----------------------------IKLESVGSMHMFEK-HLIKVKI--SMCKLLH-

Query:  ------HKLNFSI---IIIRRENVAGGKRKEKEAGGCGCYGGRPEREGVELERKCSRRFTVTSVALR------SNIPSVLAEDGYCIIREDHRKQLTIVP
               KL   +   I+ +  N A  ++  KE        G+ ERE VE +R   R     S+  +       N      + G  I + D  ++     
Subjt:  ------HKLNFSI---IIIRRENVAGGKRKEKEAGGCGCYGGRPEREGVELERKCSRRFTVTSVALR------SNIPSVLAEDGYCIIREDHRKQLTIVP

Query:  -----------MERLQTIGARWTNMHIASDEKIDTFELDYDGKMD----YCWTTYA-CLAKNTSPEEPRPKTLTRTQL
                   MER + +GA+WT+ +IA DEKI+TFELDYDGK D    Y   +YA  + +  + +E R K L   QL
Subjt:  -----------MERLQTIGARWTNMHIASDEKIDTFELDYDGKMD----YCWTTYA-CLAKNTSPEEPRPKTLTRTQL

KAF8648293.1 hypothetical protein HU200_064872 [Digitaria exilis]1.2e-1042.34Show/hide
Query:  GQEINPHVPQYMSSAPW-------------------------------------------CLNAQTE----------TSGGSTGTVRNLRIREDIARYLL
        G+EINPH+PQYMSSAPW                                           C N Q +          T GGSTGTVRNLRIRED A+YLL
Subjt:  GQEINPHVPQYMSSAPW-------------------------------------------CLNAQTE----------TSGGSTGTVRNLRIREDIARYLL

Query:  NLDVNAAHYDP
        NLDVN+A+YDP
Subjt:  NLDVNAAHYDP

OEL31066.1 Pre-mRNA-splicing factor SLU7-A, partial [Dichanthelium oligosanthes]5.6e-1348.42Show/hide
Query:  GQEINPHVPQYMSSAPWCLNAQ-------------------------------------TETSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
        G+EINPH+PQYMSSAPW LN++                                       T GGSTGTVRNLRIRED A+YLLNLDVN+A+YDP
Subjt:  GQEINPHVPQYMSSAPWCLNAQ-------------------------------------TETSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

XP_011083314.1 pre-mRNA-splicing factor SLU7-A-like [Sesamum indicum]4.9e-0939.17Show/hide
Query:  GQEINPHVPQYMSSAPW-CLNAQTE-------------------------------------------------------------TSGGSTGTVRNLRI
        G+EINPH+PQYMSSAPW    A+ E                                                             T GGSTGTVRNLRI
Subjt:  GQEINPHVPQYMSSAPW-CLNAQTE-------------------------------------------------------------TSGGSTGTVRNLRI

Query:  REDIARYLLNLDVNAAHYDP
        RED A+YLLNLDVN+AHYDP
Subjt:  REDIARYLLNLDVNAAHYDP

TrEMBL top hitse value%identityAlignment
A0A1E5W0Y7 Pre-mRNA-splicing factor SLU7 (Fragment)2.7e-1348.42Show/hide
Query:  GQEINPHVPQYMSSAPWCLNAQ-------------------------------------TETSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
        G+EINPH+PQYMSSAPW LN++                                       T GGSTGTVRNLRIRED A+YLLNLDVN+A+YDP
Subjt:  GQEINPHVPQYMSSAPWCLNAQ-------------------------------------TETSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

A0A2P5CNP2 Pre-mRNA-splicing factor SLU75.9e-0891.18Show/hide
Query:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
        T GGSTGTVRNLRIREDIA+YLLNLDVN+AHYDP
Subjt:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

A0A444EZE4 Pre-mRNA-splicing factor SLU7 (Fragment)4.5e-0845.35Show/hide
Query:  GQEINPHVPQYMSSAPWCLNAQTET---------------SGGSTGT-------------VRNLRIREDIARYLLNLDVNAAHYDP
        G+EINPH+PQYMSSAPW LNA+  +               S    G               +NLRIRED A+YLLNLDV++A+YDP
Subjt:  GQEINPHVPQYMSSAPWCLNAQTET---------------SGGSTGT-------------VRNLRIREDIARYLLNLDVNAAHYDP

A0A5B7AWG3 Pre-mRNA-splicing factor SLU7 (Fragment)3.4e-0847.06Show/hide
Query:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP-----------------ILMVIIKLE-------SVGSMHMFEKHLIKVKISMCKLLHHKLNFSIII
        T GGSTGTVRNLRIRED A+YLLNLDVN+AHYDP                     IIK+E       S  S  +  KHL +  I  C  LH +L+  I I
Subjt:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP-----------------ILMVIIKLE-------SVGSMHMFEKHLIKVKISMCKLLHHKLNFSIII

Query:  IR
        IR
Subjt:  IR

A0A6I9TEW3 Pre-mRNA-splicing factor SLU72.4e-0939.17Show/hide
Query:  GQEINPHVPQYMSSAPW-CLNAQTE-------------------------------------------------------------TSGGSTGTVRNLRI
        G+EINPH+PQYMSSAPW    A+ E                                                             T GGSTGTVRNLRI
Subjt:  GQEINPHVPQYMSSAPW-CLNAQTE-------------------------------------------------------------TSGGSTGTVRNLRI

Query:  REDIARYLLNLDVNAAHYDP
        RED A+YLLNLDVN+AHYDP
Subjt:  REDIARYLLNLDVNAAHYDP

SwissProt top hitse value%identityAlignment
A2YQU8 Pre-mRNA-splicing factor SLU73.0e-0985.29Show/hide
Query:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
        T GGSTGTVRNLRIRED A+YLLNLDVN+A+YDP
Subjt:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

A2YQU8 Pre-mRNA-splicing factor SLU78.4e-0485.71Show/hide
Query:  GQEINPHVPQYMSSAPWCLNA
        G+EINPH+PQYMSSAPW LNA
Subjt:  GQEINPHVPQYMSSAPWCLNA

O23174 Pre-mRNA-splicing factor SLU7-B6.0e-1088.24Show/hide
Query:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
        T GGSTGTVRNLRIRED A+YLLNLDVN+AHYDP
Subjt:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

Q3ZBE5 Pre-mRNA-splicing factor SLU71.0e-0481.48Show/hide
Query:  TVRNLRIREDIARYLLNLDVNAAHYDP
        TVRNLRIREDIA+YL NLD N+A+YDP
Subjt:  TVRNLRIREDIARYLLNLDVNAAHYDP

Q6ZK48 Pre-mRNA-splicing factor SLU73.0e-0985.29Show/hide
Query:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
        T GGSTGTVRNLRIRED A+YLLNLDVN+A+YDP
Subjt:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

Q6ZK48 Pre-mRNA-splicing factor SLU78.4e-0485.71Show/hide
Query:  GQEINPHVPQYMSSAPWCLNA
        G+EINPH+PQYMSSAPW LNA
Subjt:  GQEINPHVPQYMSSAPWCLNA

Q9SHY8 Pre-mRNA-splicing factor SLU7-A6.0e-1088.24Show/hide
Query:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
        T GGSTGTVRNLRIRED A+YLLNLDVN+AHYDP
Subjt:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

Q9SHY8 Pre-mRNA-splicing factor SLU7-A1.1e-0377.27Show/hide
Query:  GQEINPHVPQYMSSAPWCLNAQ
        G+EINPH+PQYMSSAPW LN++
Subjt:  GQEINPHVPQYMSSAPWCLNAQ

Arabidopsis top hitse value%identityAlignment
AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor4.3e-1188.24Show/hide
Query:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
        T GGSTGTVRNLRIRED A+YLLNLDVN+AHYDP
Subjt:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor7.8e-0577.27Show/hide
Query:  GQEINPHVPQYMSSAPWCLNAQ
        G+EINPH+PQYMSSAPW LN++
Subjt:  GQEINPHVPQYMSSAPWCLNAQ

AT3G45950.1 Pre-mRNA splicing Prp18-interacting factor1.8e-0982.35Show/hide
Query:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
        T GGS GTVRNLRIRED A+YLLNLDVN+A+YDP
Subjt:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

AT4G37120.1 Pre-mRNA splicing Prp18-interacting factor4.3e-1188.24Show/hide
Query:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP
        T GGSTGTVRNLRIRED A+YLLNLDVN+AHYDP
Subjt:  TSGGSTGTVRNLRIREDIARYLLNLDVNAAHYDP

AT4G37120.1 Pre-mRNA splicing Prp18-interacting factor2.5e-0363.64Show/hide
Query:  GQEINPHVPQYMSSAPWCLNAQ
        G+EINPH+P+YMS APW L ++
Subjt:  GQEINPHVPQYMSSAPWCLNAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGCCGGAGAAAAGAAAAAAGAAAAGCAGGCCGGCGGCAGAGTGAACGGAATAGCACTGAGACGGAGCGTTCACAGTGCCTTCGTTGGAGTTGCGCTCGAATATCG
CCTACTGCATCAGACCCGAAACCTAAATCGGGAGGGAACGGAAAAGTTCTCCCATTTAAATATTAGACATCGTTTTGATTTACACTTCCGTGGGCAAGAGATCAACCCTC
ATGTTCCTCAATATATGTCCTCTGCACCTTGGTGTCTTAATGCTCAGACAGAGACCAGTGGTGGAAGCACCGGAACCGTAAGGAACTTACGTATTCGAGAAGATATAGCA
AGATATCTCTTAAATCTTGATGTCAATGCTGCTCATTATGATCCCATCTTGATGGTGATAATCAAACTAGAATCAGTGGGCAGTATGCATATGTTTGAGAAGCATTTGAT
AAAGGTCAAGATATCCATGTGCAAGCTGCTCCATCACAAGCTGAACTTCTCGATAATAATTATAAGGAGAGAGAATGTCGCCGGAGGAAAGAGAAAAGAAAAGGAGGCCG
GCGGCTGTGGTTGTTATGGCGGTCGGCCGGAGAGAGAAGGGGTGGAGCTGGAGAGAAAATGTAGCCGTAGGTTCACAGTGACTTCGGTGGCGTTGCGCTCGAATATCCCC
TCTGTTTTAGCTGAAGATGGCTACTGCATCATAAGGGAGGATCATCGCAAGCAGCTTACCATCGTGCCTATGGAAAGGCTCCAAACAATAGGAGCAAGATGGACAAACAT
GCACATAGCATCGGATGAGAAGATAGACACATTTGAACTAGATTATGATGGAAAAATGGATTATTGTTGGACAACCTATGCTTGTCTCGCCAAAAACACTTCGCCGGAAG
AACCTCGACCTAAAACCCTCACTCGAACACAACTCGCCATTGTAGATGCCTGTAAAACTCCAAGACGACGGCAGACTGCTGGTTGGTCGCCGGAGGAAAGAAAGCAGGCC
GGTGGAGGTGGAGAGATAAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGCCGGAGAAAAGAAAAAAGAAAAGCAGGCCGGCGGCAGAGTGAACGGAATAGCACTGAGACGGAGCGTTCACAGTGCCTTCGTTGGAGTTGCGCTCGAATATCG
CCTACTGCATCAGACCCGAAACCTAAATCGGGAGGGAACGGAAAAGTTCTCCCATTTAAATATTAGACATCGTTTTGATTTACACTTCCGTGGGCAAGAGATCAACCCTC
ATGTTCCTCAATATATGTCCTCTGCACCTTGGTGTCTTAATGCTCAGACAGAGACCAGTGGTGGAAGCACCGGAACCGTAAGGAACTTACGTATTCGAGAAGATATAGCA
AGATATCTCTTAAATCTTGATGTCAATGCTGCTCATTATGATCCCATCTTGATGGTGATAATCAAACTAGAATCAGTGGGCAGTATGCATATGTTTGAGAAGCATTTGAT
AAAGGTCAAGATATCCATGTGCAAGCTGCTCCATCACAAGCTGAACTTCTCGATAATAATTATAAGGAGAGAGAATGTCGCCGGAGGAAAGAGAAAAGAAAAGGAGGCCG
GCGGCTGTGGTTGTTATGGCGGTCGGCCGGAGAGAGAAGGGGTGGAGCTGGAGAGAAAATGTAGCCGTAGGTTCACAGTGACTTCGGTGGCGTTGCGCTCGAATATCCCC
TCTGTTTTAGCTGAAGATGGCTACTGCATCATAAGGGAGGATCATCGCAAGCAGCTTACCATCGTGCCTATGGAAAGGCTCCAAACAATAGGAGCAAGATGGACAAACAT
GCACATAGCATCGGATGAGAAGATAGACACATTTGAACTAGATTATGATGGAAAAATGGATTATTGTTGGACAACCTATGCTTGTCTCGCCAAAAACACTTCGCCGGAAG
AACCTCGACCTAAAACCCTCACTCGAACACAACTCGCCATTGTAGATGCCTGTAAAACTCCAAGACGACGGCAGACTGCTGGTTGGTCGCCGGAGGAAAGAAAGCAGGCC
GGTGGAGGTGGAGAGATAAGGTAG
Protein sequenceShow/hide protein sequence
MIAGEKKKEKQAGGRVNGIALRRSVHSAFVGVALEYRLLHQTRNLNREGTEKFSHLNIRHRFDLHFRGQEINPHVPQYMSSAPWCLNAQTETSGGSTGTVRNLRIREDIA
RYLLNLDVNAAHYDPILMVIIKLESVGSMHMFEKHLIKVKISMCKLLHHKLNFSIIIIRRENVAGGKRKEKEAGGCGCYGGRPEREGVELERKCSRRFTVTSVALRSNIP
SVLAEDGYCIIREDHRKQLTIVPMERLQTIGARWTNMHIASDEKIDTFELDYDGKMDYCWTTYACLAKNTSPEEPRPKTLTRTQLAIVDACKTPRRRQTAGWSPEERKQA
GGGGEIR