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Sgr008347 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr008347
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionHistone H3
Genome locationtig00006676:49633..50023
RNA-Seq ExpressionSgr008347
SyntenySgr008347
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003714 - transcription corepressor activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR000164 - Histone H3/CENP-A
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EAY99520.1 hypothetical protein OsI_21490 [Oryza sativa Indica Group]2.7e-2071.43Show/hide
Query:  EMARTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        EM  TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  EMARTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

EMS58979.1 Histone H3.3 [Triticum urartu]4.7e-2073.75Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS   LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +ASLVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

EMS66053.1 Histone H3.3 [Triticum urartu]1.6e-2074.07Show/hide
Query:  RTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        RTV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEAV+A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  RTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

KAG1664543.1 hypothetical protein FOA52_013010 [Chlamydomonas sp. UWO 241]4.7e-2072.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQ+FK +LHFQS  VLALQEA +A LVGLF+DTNL  I  KHVTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

XP_037463200.1 histone H3.3-like [Triticum dicoccoides]4.7e-2072.84Show/hide
Query:  RTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        RTV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  RTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

TrEMBL top hitse value%identityAlignment
A2Y8W0 Histone domain-containing protein1.3e-2071.43Show/hide
Query:  EMARTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        EM  TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  EMARTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

M7ZS96 Histone H3.37.7e-2174.07Show/hide
Query:  RTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        RTV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEAV+A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  RTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

M8AEE5 Histone H3.32.3e-2073.75Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS   LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +ASLVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

Q43202 Histone H3 (Fragment)2.9e-2072.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

T1N5J0 Histone domain-containing protein7.7e-2174.07Show/hide
Query:  RTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        RTV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEAV+A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  RTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

SwissProt top hitse value%identityAlignment
P59169 Histone H3.31.8e-2272.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

P69245 Histone H3.31.8e-2272.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

Q3C2E5 Histone H3.31.8e-2272.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

Q6RUR1 Histone H3.31.8e-2272.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

Q71V89 Histone H3.31.8e-2272.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

Arabidopsis top hitse value%identityAlignment
AT4G40030.1 Histone superfamily protein1.3e-2372.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

AT4G40030.2 Histone superfamily protein1.3e-2372.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

AT4G40030.3 Histone superfamily protein1.3e-2372.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

AT4G40040.1 Histone superfamily protein1.3e-2372.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI

AT4G40040.2 Histone superfamily protein1.3e-2372.5Show/hide
Query:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI
        TV LRE RKYQKS + LIRK PF+RL+ EIAQDFK +L FQSH VLALQEA +A LVGLF+DTNL  I  K VTIMPKDI
Subjt:  TVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSH-VLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTGGAATGAGATGGCTCGTACTGTAACTCTTCGTGAAAATCGTAAGTATCAAAAGAGTATTAAGCGATTGATTAGGAAGTTTCCATTCCGGAGGTTGATTCTTGA
AATTGCTCAAGATTTCAAGAATAATCTACATTTCCAAAGCCATGTTCTGGCATTACAAGAGGCCGTCAAGGCATCCCTTGTTGGGCTGTTCAAAGACACCAATCTCTATG
GCATTCGCACCAAGCATGTTACCATAATGCCTAAAGATATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTGGAATGAGATGGCTCGTACTGTAACTCTTCGTGAAAATCGTAAGTATCAAAAGAGTATTAAGCGATTGATTAGGAAGTTTCCATTCCGGAGGTTGATTCTTGA
AATTGCTCAAGATTTCAAGAATAATCTACATTTCCAAAGCCATGTTCTGGCATTACAAGAGGCCGTCAAGGCATCCCTTGTTGGGCTGTTCAAAGACACCAATCTCTATG
GCATTCGCACCAAGCATGTTACCATAATGCCTAAAGATATCTAG
Protein sequenceShow/hide protein sequence
MKWNEMARTVTLRENRKYQKSIKRLIRKFPFRRLILEIAQDFKNNLHFQSHVLALQEAVKASLVGLFKDTNLYGIRTKHVTIMPKDI