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Sgr008535 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr008535
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionRNase H domain-containing protein
Genome locationtig00006961:24887..25397
RNA-Seq ExpressionSgr008535
SyntenySgr008535
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0817793.1 hypothetical protein [Gossypium harknessii]9.3e-0527.67Show/hide
Query:  MEEMITLCWTLWNNRNNLCF---QREGKRPWELWV---WANQYDNG-EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI---RLNV---RCVDFADG
        M +++T+ W  WNNRNN  F   + E K+ WE  +   W     N  ++ FDA  ++ +N  G G +IK++ G V+         RL+V    C+ F + 
Subjt:  MEEMITLCWTLWNNRNNLCF---QREGKRPWELWV---WANQYDNG-EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI---RLNV---RCVDFADG

Query:  IKLALECGVW-AIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSGADLSFEF
        IK+A    +   +  E+D   +    ++   D + + + I+      +SW GA L  +F
Subjt:  IKLALECGVW-AIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSGADLSFEF

TXG67779.1 hypothetical protein EZV62_009054 [Acer yangbiense]5.4e-0524.22Show/hide
Query:  ITLCWTLWNNRNNLCFQREGKRPWELWVWANQYDNG-----------------------------EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI
        I   W +WNNRN   F  + K   + W  A  + +G                             ++  DAA+ + +N    GI+I++  G +++ A+ +
Subjt:  ITLCWTLWNNRNNLCFQREGKRPWELWVWANQYDNG-----------------------------EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI

Query:  RLNVRCVDFA------DGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLK
              VD A      +GI LA   G+ ++ +E DS  V +L + EI   ++V ++I D++
Subjt:  RLNVRCVDFA------DGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLK

TXG71894.1 hypothetical protein EZV62_000473 [Acer yangbiense]2.9e-0623.6Show/hide
Query:  ITLCWTLWNNRNNLCFQREGKRPWELWVWANQYDNG-----------------------------EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI
        IT  W +WNNRN   F+ + K   + W  A  + +G                             ++  DAA+ + +N   +GI+I++  G ++++A+ +
Subjt:  ITLCWTLWNNRNNLCFQREGKRPWELWVWANQYDNG-----------------------------EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI

Query:  RLNVRCVDFA------DGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLK
               D A      +G+ LA   G+  + +E DS  V +L + EI   ++V ++I D++
Subjt:  RLNVRCVDFA------DGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLK

XP_015382610.1 uncharacterized protein LOC107175578 [Citrus sinensis]7.1e-0525.41Show/hide
Query:  MEEMITLCWTLWNNRNNLCFQREGKRPWEL------------------------------WVWANQYDNG--EMGFDAAMSISQNSVGIGIIIKNQGGEV
        +E MI +CW +WN RN + F+ + + P  L                               VW N   NG  ++  DAA S  ++  G+G II++  G V
Subjt:  MEEMITLCWTLWNNRNNLCFQREGKRPWEL------------------------------WVWANQYDNG--EMGFDAAMSISQNSVGIGIIIKNQGGEV

Query:  IRTASTIRLNVRCVDFAD------GIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSGADLSF
        I  A  I      V FA+      G+++A      A+ VE D+  V KL++++   +SE+  +I +++  +R++    +++
Subjt:  IRTASTIRLNVRCVDFAD------GIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSGADLSF

XP_042954577.1 uncharacterized protein LOC122290987 [Carya illinoinensis]4.2e-0523.89Show/hide
Query:  MEEMITLCWTLWNNRNNLCFQREGKRP----------WELWVWANQY---------------------DNGEMGFDAAMSISQNSVGIGIIIKNQGGEVI
        +E  + +   +W  RN + F+ +   P          WE+++ AN+                      +  ++ FDAA+ +    +G+GII++N  G+++
Subjt:  MEEMITLCWTLWNNRNNLCFQREGKRP----------WELWVWANQY---------------------DNGEMGFDAAMSISQNSVGIGIIIKNQGGEVI

Query:  RTASTIR------LNVRCVDFADGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSGADLSF
            T R        V C      +++  E G W I +E D+  V   ++   EDESE   +I DLK  +    G  L+F
Subjt:  RTASTIR------LNVRCVDFADGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSGADLSF

TrEMBL top hitse value%identityAlignment
A0A5C7IFK3 RNase H domain-containing protein2.6e-0524.22Show/hide
Query:  ITLCWTLWNNRNNLCFQREGKRPWELWVWANQYDNG-----------------------------EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI
        I   W +WNNRN   F  + K   + W  A  + +G                             ++  DAA+ + +N    GI+I++  G +++ A+ +
Subjt:  ITLCWTLWNNRNNLCFQREGKRPWELWVWANQYDNG-----------------------------EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI

Query:  RLNVRCVDFA------DGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLK
              VD A      +GI LA   G+ ++ +E DS  V +L + EI   ++V ++I D++
Subjt:  RLNVRCVDFA------DGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLK

A0A5C7IST2 RNase H domain-containing protein1.4e-0623.6Show/hide
Query:  ITLCWTLWNNRNNLCFQREGKRPWELWVWANQYDNG-----------------------------EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI
        IT  W +WNNRN   F+ + K   + W  A  + +G                             ++  DAA+ + +N   +GI+I++  G ++++A+ +
Subjt:  ITLCWTLWNNRNNLCFQREGKRPWELWVWANQYDNG-----------------------------EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI

Query:  RLNVRCVDFA------DGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLK
               D A      +G+ LA   G+  + +E DS  V +L + EI   ++V ++I D++
Subjt:  RLNVRCVDFA------DGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLK

A0A6J1CIF1 uncharacterized protein LOC1110112371.7e-0434.58Show/hide
Query:  DAAMSISQNSVGIGIIIKNQGGEVIRTASTIRLNVRCVDFA------DGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSG
        DA+   S    G+GIII+N  G+V+ +A+    N++ VD A      +G++LA + GV  + +E DS R+F L     ED SE   ++  LK K      
Subjt:  DAAMSISQNSVGIGIIIKNQGGEVIRTASTIRLNVRCVDFA------DGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSG

Query:  ADLSFEF
           SF F
Subjt:  ADLSFEF

A0A7J9I7I3 Uncharacterized protein (Fragment)4.5e-0527.67Show/hide
Query:  MEEMITLCWTLWNNRNNLCF---QREGKRPWELWV---WANQYDNG-EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI---RLNV---RCVDFADG
        M +++T+ W  WNNRNN  F   + E K+ WE  +   W     N  ++ FDA  ++ +N  G G +IK++ G V+         RL+V    C+ F + 
Subjt:  MEEMITLCWTLWNNRNNLCF---QREGKRPWELWV---WANQYDNG-EMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTI---RLNV---RCVDFADG

Query:  IKLALECGVW-AIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSGADLSFEF
        IK+A    +   +  E+D   +    ++   D + + + I+      +SW GA L  +F
Subjt:  IKLALECGVW-AIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSGADLSFEF

A0A803NGI9 Uncharacterized protein1.2e-0525.7Show/hide
Query:  MEEMITLCWTLWNNRNNLCFQREGKRPWELWVWANQY-------------------------------DNGEMGFDAAMSISQNSVGIGIIIKNQGGEVI
        ME+++   W LWN+RNN    + G  P +LW  +  Y                               D  +M  DAA  IS+N +G+GIII+N  G+V+
Subjt:  MEEMITLCWTLWNNRNNLCFQREGKRPWELWVWANQY-------------------------------DNGEMGFDAAMSISQNSVGIGIIIKNQGGEVI

Query:  RTAS---TIRLNVRCVD---FADGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSGADLS
           S   T RL  + ++      GI  A  C +     E DS  +   ++      S    ++ D+K ++   S   +S
Subjt:  RTAS---TIRLNVRCVD---FADGIKLALECGVWAIQVEVDSYRVFKLLHDEIEDESEVASMIRDLKQKVRSWSGADLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAATGATAACACTATGCTGGACTTTGTGGAACAATAGAAATAACCTATGCTTCCAAAGAGAGGGGAAACGACCATGGGAACTGTGGGTTTGGGCAAATCAATA
CGACAATGGGGAGATGGGCTTTGATGCAGCTATGTCCATATCACAGAATTCAGTAGGCATTGGCATTATCATAAAAAATCAGGGGGGAGAAGTCATTCGTACCGCATCCA
CGATTCGTCTGAATGTACGCTGTGTTGATTTCGCCGATGGGATAAAGCTTGCATTAGAGTGTGGGGTTTGGGCGATTCAAGTGGAAGTTGATTCGTATAGAGTTTTTAAG
CTTCTGCATGATGAAATTGAAGACGAATCAGAGGTGGCAAGTATGATCCGAGACCTGAAGCAGAAAGTGAGAAGTTGGAGTGGAGCTGATTTGTCTTTTGAGTTTGGTTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAATGATAACACTATGCTGGACTTTGTGGAACAATAGAAATAACCTATGCTTCCAAAGAGAGGGGAAACGACCATGGGAACTGTGGGTTTGGGCAAATCAATA
CGACAATGGGGAGATGGGCTTTGATGCAGCTATGTCCATATCACAGAATTCAGTAGGCATTGGCATTATCATAAAAAATCAGGGGGGAGAAGTCATTCGTACCGCATCCA
CGATTCGTCTGAATGTACGCTGTGTTGATTTCGCCGATGGGATAAAGCTTGCATTAGAGTGTGGGGTTTGGGCGATTCAAGTGGAAGTTGATTCGTATAGAGTTTTTAAG
CTTCTGCATGATGAAATTGAAGACGAATCAGAGGTGGCAAGTATGATCCGAGACCTGAAGCAGAAAGTGAGAAGTTGGAGTGGAGCTGATTTGTCTTTTGAGTTTGGTTG
A
Protein sequenceShow/hide protein sequence
MEEMITLCWTLWNNRNNLCFQREGKRPWELWVWANQYDNGEMGFDAAMSISQNSVGIGIIIKNQGGEVIRTASTIRLNVRCVDFADGIKLALECGVWAIQVEVDSYRVFK
LLHDEIEDESEVASMIRDLKQKVRSWSGADLSFEFG