; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr009928 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr009928
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptiontranscriptional elongation regulator MINIYO
Genome locationtig00008552:31669..37425
RNA-Seq ExpressionSgr009928
SyntenySgr009928
Gene Ontology termsNA
InterPro domainsIPR013930 - RNA polymerase II-associated protein 1, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010830.1 Transcriptional elongation regulator MINIYO [Cucurbita argyrosperma subsp. argyrosperma]2.1e-21561.34Show/hide
Query:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG
        MEKK  SSRRSQP+SSAR KVFG NALQL+E  ASRLVGGIVEKGISDA+Q+K F S+APP+PSVLPFP ARHRSHGPHWESVTSK GG+NI+DDR+ D 
Subjt:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG

Query:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--
        EEDE LMEIDSIANFANPIQRKKKSSLDFGRWRE V GHNH     EE KV  LAKT+ L RAGEA +  DN  MSC+PLS  VLAPSLMN+EHS S+  
Subjt:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--

Query:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE
                                         ENLQD  DQ GHISES E+ EG+PLD                EMVPCF SNIKGEDAFSTLESQID 
Subjt:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE

Query:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID
        ENCARIQRMS EEIAEAQAEIMEKMSPAL+K LK R                                     ENG+TS  T LK   SGLQNV+VQK D
Subjt:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID

Query:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL
        SGSS WNAWNERVEAVR LRFSLEGNIV S SFQQSEN     HGYSTENV SRDFLRTEG              +    IPGQRVLGLHVISNVL+KA 
Subjt:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL

Query:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF
        LNT+ KQVGS MVKDSSSVDY AIWAY LGPEPELALSLRMCLDDNHNSVILACAEVIQC+LS NLNETFF  L                 SKPEIN GF
Subjt:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF

Query:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------
        L GGFWKYSAKPSNILP SEDV   EDGEKYTIQDDIVVAQQDI AGLVRMG+LPRLRYLLE                                      
Subjt:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------

Query:  -------------------------VLACSDRKNCIAFVKSGAFQ
                                 VL+ SDRKNCI FVKSGAFQ
Subjt:  -------------------------VLACSDRKNCIAFVKSGAFQ

XP_022140384.1 transcriptional elongation regulator MINIYO [Momordica charantia]2.3e-23062.63Show/hide
Query:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG
        MEK T SSRR Q +SSARAKVFGA ALQL+ED ASR+VGGIVEKGISD+ QN+ F SLAPPKPSVLPFP ARHRSHGPHW SVTSKKGGDNIK DRQE+G
Subjt:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG

Query:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHS-----
        E+DESL+EI+SIANFANPIQRK K+SLDFGRWREVVRGHNH    +EEKKV GLAK + L RAGEAIN  D+ MMSCKPLS DVLAP LMN EH+     
Subjt:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHS-----

Query:  ---------------LSETEN--------------LQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE
                       +S T N               QDVDD+SGH+SES EI+EGMP+D                EMVPCFGSNIKGEDAFSTLESQI+ 
Subjt:  ---------------LSETEN--------------LQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE

Query:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID
        EN ARIQRMS EEIAEAQ EI EKMSPALVKALKRR                                     ENG+TS  +T+KDTKSGLQNVSVQK D
Subjt:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID

Query:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL
         GSSTW+AWNERVEAVRLLRFSLEGNIV SCSFQQSENGD + HGYSTENVTSRDFLRT+G              +    IPGQRVLGLHVISNVL+KAL
Subjt:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL

Query:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF
        LNT QK VGS MVKD  S+DY AIWAYTLGPEPELALSLR+CLDDNH+SV+LACAEVIQCIL CNLNE FF  L                 SKPEINVGF
Subjt:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF

Query:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------
        L+GGFWKY+AKPSNILPFSEDVG  EDGEKYTIQDDIVVAQQDILAGLVRMGIL RLRYLLE                                      
Subjt:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------

Query:  -------------------------VLACSDRKNCIAFVKSGAF
                                 VLACSDR NC+AFVK+GAF
Subjt:  -------------------------VLACSDRKNCIAFVKSGAF

XP_022985672.1 transcriptional elongation regulator MINIYO [Cucurbita maxima]1.0e-21761.88Show/hide
Query:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG
        MEKKT SSRRSQP+SSARA VFG NALQL+E  ASRLVGGIVEKGISDA+Q+K F S+APP+PSVLPFP ARHRSHGPHWESVTSK GGDNI+DDR+ D 
Subjt:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG

Query:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNHQ----EEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--
        EEDE LMEIDSIANFANPIQRKKKSSLDFGRWRE V GHNH     EE KV  LAKT  L RAGEA N RDN  MSC+PLS  VLAPSLMN+E+S S+  
Subjt:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNHQ----EEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--

Query:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE
                                         ENLQD  DQ G ISES E+ EG+PLD                EMVPCF SNIKGEDAFSTLESQID 
Subjt:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE

Query:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID
        ENCARIQRMS EEIAEAQAEIMEKMSPAL+K LK R                                     ENG+TS  T LK   SGLQNV+VQK D
Subjt:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID

Query:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL
        SGSS WNAWNERVEAVR LRFSLEGNIV S SFQQSEN     HGYSTENV SRDFLRTEG              +    IPGQRVLGLHVISNVL+KA 
Subjt:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL

Query:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF
        LNT  KQVGS MVKD SSVDY AIWAY LGPEPELALSLRMCLDDNHNSVILACAEVIQC+LSCNLNETFF  L                 SKPEIN GF
Subjt:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF

Query:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------
        L GGFWKYSAKPSNILPFSEDV   EDGEKYTIQDDIVVAQQDI AGLVRMG+LPRLRYLLE                                      
Subjt:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------

Query:  -------------------------VLACSDRKNCIAFVKSGAFQ
                                 VL+ SDRKNCIAFVKSGAFQ
Subjt:  -------------------------VLACSDRKNCIAFVKSGAFQ

XP_023512432.1 transcriptional elongation regulator MINIYO [Cucurbita pepo subsp. pepo]1.7e-22062.28Show/hide
Query:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG
        MEKKT SSRRSQP+SSARAKVFG NALQL+E  ASRLVGGIVEKGISDA+Q+K F S+APP+PSVLPFP ARHRSHGPHWESVTSK GGDNI+DDR  D 
Subjt:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG

Query:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNHQ----EEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--
        EEDE LMEIDSIANFANPIQRKKKSSLDFGRWRE V GHNH     EE KV  LAKT+ L RAGEA N RDN  MSC+PLS  VLAPSLMN+EHS S+  
Subjt:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNHQ----EEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--

Query:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE
                                         ENLQD  DQ GHISES E+ EG+PLD                EMVPCF SNIKGEDAFSTLESQID 
Subjt:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE

Query:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID
        ENCARIQRMS EEIAEAQAEIMEKMSPAL+K LK R                                     ENG+TS  T LK  KSGLQNV+VQK D
Subjt:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID

Query:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL
        SGSS WNAWNERVEAVR LRFSLEGNI+ S SFQQSEN     HGYSTENV SRDFLRTEG              +    IPGQRVLGLHVISNVL+KA 
Subjt:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL

Query:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF
        LNT+ KQVGS MVKDSSSVDY AIWAY LGPEPELALSLRMCLDDNHNSVILACAEVIQC+LSCNLNETFF  L                 SKPEIN GF
Subjt:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF

Query:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------
        L GGFWKYSAKPSNILPFSEDV   EDGEKYTIQDDIVVAQQDI AGLVRMG+LPRLRYLLE                                      
Subjt:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------

Query:  -------------------------VLACSDRKNCIAFVKSGAFQ
                                 VL+ SDRKNCI FVKSGAFQ
Subjt:  -------------------------VLACSDRKNCIAFVKSGAFQ

XP_038900571.1 transcriptional elongation regulator MINIYO [Benincasa hispida]9.5e-21661.07Show/hide
Query:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG
        MEKKT SSRRSQP+SSARAKVFG N LQL+ED ASRLVGGIVEKGISDA Q+  F SL PP PSVLPFP ARHRSHGPHWESVT KKGGDNIK DRQEDG
Subjt:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG

Query:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--
        EEDE LMEIDSIANFANPIQRKKKS LDFGRWRE V GHNH    +EEKK  GL KT  L   GEA + RDN  MSCKPLS  V  PS MN+EHS S+  
Subjt:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--

Query:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE
                                         ENLQDV D+ GHIS S E++E M LD                EM PCFGSNIKGED+FST+ESQID 
Subjt:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE

Query:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID
        ENCARIQ+MS EEIAEAQAEIMEKMSPALV+ALK R                                       G+TSVKTTLKDTKSGLQ+VSVQK  
Subjt:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID

Query:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL
        SGSS WNAWNERVEAVR LRFSLEGNIV S SFQQSE+GD+  HGYS ENV SRDFLRTEG              +    IPGQRVLGLHVISNVL+KAL
Subjt:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL

Query:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF
        LNT   QVGS MVKDSSSVDY AIWAY LGPEPELALSLRMCLDDNHNSV+LACAEVIQ +LSC LNETFF  L                 SKPEINVGF
Subjt:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF

Query:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------
        L+GGFWKYSAKPSNILPFSED    +DGEK+TIQDDIVVAQQDI AGLVRMGILPRLRYLLE                                      
Subjt:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------

Query:  -------------------------VLACSDRKNCIAFVKSGAFQ
                                 VLA SDR NC+AFVKSGAFQ
Subjt:  -------------------------VLACSDRKNCIAFVKSGAFQ

TrEMBL top hitse value%identityAlignment
A0A1S3BKC4 LOW QUALITY PROTEIN: transcriptional elongation regulator MINIYO1.8e-20459.67Show/hide
Query:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG
        MEKKT S RRSQ  SSARAKVFG N+LQL+ED A+RLVGGIVEKG+SD++Q+  F S A P+PSVLPFP ARHRSHGPHWESVTSKKGGDNIK DR EDG
Subjt:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG

Query:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--
        EEDE++M  DSIANFANPIQRKKKSSLDFGRWRE    HNH    +EEK++  LAKT  L RAGEA    D+  MSC+P S  VLAPSLM  E S S+  
Subjt:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--

Query:  -----------------------TENLQDVDDQSGHISESAEIDEGMPLD---------------EMVPCFGSNIKGEDAFSTLESQIDEENCARIQRMS
                                ENLQDV DQ G ISES E++E M LD               EM PCF SNIKG+DAF TL+SQID EN AR+Q+MS
Subjt:  -----------------------TENLQDVDDQSGHISESAEIDEGMPLD---------------EMVPCFGSNIKGEDAFSTLESQIDEENCARIQRMS

Query:  TEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKIDSGSSTWNAWN
         EEIAEAQAEIMEKMSPALVKALK R                                     ENG+TSVKTTLKDTKSGLQ+VSVQKIDSGSS WNAWN
Subjt:  TEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKIDSGSSTWNAWN

Query:  ERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKALLNTQQKQVGS
        ERVEAVR LRFSLEGN+V S SFQQSEN     HGYSTENV SRDFLRTEG              +    IPGQRVLGLHVISNVL+KALLNT   QVGS
Subjt:  ERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKALLNTQQKQVGS

Query:  IMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGFLRGGFWKYSA
         M+K+ SSVDY AIWAY LGPEPELALSLR+CLDDNHNSV+LACAEVIQ +LSCNLNE+FF  L                 SKPEINVGFL+GGFWKYSA
Subjt:  IMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGFLRGGFWKYSA

Query:  KPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE------------------------------------------------
        K SNILP +ED G  EDG KYTIQDDIVVAQQDI AGLVRMGILPRL YLLE                                                
Subjt:  KPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE------------------------------------------------

Query:  ---------------VLACSDRKNCIAFVKSGAF
                       VLA SDRKNC AFVKSGAF
Subjt:  ---------------VLACSDRKNCIAFVKSGAF

A0A5A7V3U3 Transcriptional elongation regulator MINIYO6.9e-20459.54Show/hide
Query:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG
        MEKKT S RRSQ  SSARAKVFG N+LQL+ED A+RLVGGIVEKG+SD++Q+  F S A P+PSVLPFP ARHRSHGPHWESVTSKKGGDNIK DR EDG
Subjt:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG

Query:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--
        EEDE++M  DSIANFANPIQRKKKSSLDFGRWRE    HNH    +EEK++  LAKT  L RAGEA    D+  MSC+P S  VLAPSLM  E S S+  
Subjt:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--

Query:  -----------------------TENLQDVDDQSGHISESAEIDEGMPLD---------------EMVPCFGSNIKGEDAFSTLESQIDEENCARIQRMS
                                ENLQDV DQ G ISES E++E M LD               EM PCF SNIKG+DAF TL+SQID EN AR+Q+MS
Subjt:  -----------------------TENLQDVDDQSGHISESAEIDEGMPLD---------------EMVPCFGSNIKGEDAFSTLESQIDEENCARIQRMS

Query:  TEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKIDSGSSTWNAWN
         EEIAEAQAEIMEKMSPALVKALK R                                     ENG+TSVKTTLKDTKSGLQ+VSVQKIDSGSS WNAWN
Subjt:  TEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKIDSGSSTWNAWN

Query:  ERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKALLNTQQKQVGS
        ERVEAVR LRFSLEGN+V S SFQQS+N     HGYSTENV SRDFLRTEG              +    IPGQRVLGLHVISNVL+KALLNT   QVGS
Subjt:  ERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKALLNTQQKQVGS

Query:  IMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGFLRGGFWKYSA
         M+K+ SSVDY AIWAY LGPEPELALSLRMCLDDNHNSV+LACAEVIQ +LSCNLNE+FF  L                 SKPEINVGFL+GGFWKYSA
Subjt:  IMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGFLRGGFWKYSA

Query:  KPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE------------------------------------------------
        K SNILP +ED G  EDG KYTIQDDIVVAQQDI AG+VRMGILPRL YLLE                                                
Subjt:  KPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE------------------------------------------------

Query:  ---------------VLACSDRKNCIAFVKSGAF
                       VLA SDRKNC AFVKSGAF
Subjt:  ---------------VLACSDRKNCIAFVKSGAF

A0A6J1CFK3 transcriptional elongation regulator MINIYO1.1e-23062.63Show/hide
Query:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG
        MEK T SSRR Q +SSARAKVFGA ALQL+ED ASR+VGGIVEKGISD+ QN+ F SLAPPKPSVLPFP ARHRSHGPHW SVTSKKGGDNIK DRQE+G
Subjt:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG

Query:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHS-----
        E+DESL+EI+SIANFANPIQRK K+SLDFGRWREVVRGHNH    +EEKKV GLAK + L RAGEAIN  D+ MMSCKPLS DVLAP LMN EH+     
Subjt:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHS-----

Query:  ---------------LSETEN--------------LQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE
                       +S T N               QDVDD+SGH+SES EI+EGMP+D                EMVPCFGSNIKGEDAFSTLESQI+ 
Subjt:  ---------------LSETEN--------------LQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE

Query:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID
        EN ARIQRMS EEIAEAQ EI EKMSPALVKALKRR                                     ENG+TS  +T+KDTKSGLQNVSVQK D
Subjt:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID

Query:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL
         GSSTW+AWNERVEAVRLLRFSLEGNIV SCSFQQSENGD + HGYSTENVTSRDFLRT+G              +    IPGQRVLGLHVISNVL+KAL
Subjt:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL

Query:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF
        LNT QK VGS MVKD  S+DY AIWAYTLGPEPELALSLR+CLDDNH+SV+LACAEVIQCIL CNLNE FF  L                 SKPEINVGF
Subjt:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF

Query:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------
        L+GGFWKY+AKPSNILPFSEDVG  EDGEKYTIQDDIVVAQQDILAGLVRMGIL RLRYLLE                                      
Subjt:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------

Query:  -------------------------VLACSDRKNCIAFVKSGAF
                                 VLACSDR NC+AFVK+GAF
Subjt:  -------------------------VLACSDRKNCIAFVKSGAF

A0A6J1FXF4 transcriptional elongation regulator MINIYO5.1e-21561.07Show/hide
Query:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG
        MEKK  SSRRSQP+SSAR KVFG NALQL+E  ASRLVGGIVEKGISDA+Q+K F S+APP+PSVLPFP ARHRSHGPHWESVTSK GG+NI+DDR+ D 
Subjt:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG

Query:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--
        EEDE LMEI+SIANFANPIQRKKKSSLDFGRWRE V GHNH     EE KV  LAKT+ L RAGEA +  DN  MSC+PLS  VLAPSLMN+EHS S+  
Subjt:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNH----QEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--

Query:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE
                                         ENLQD  DQ GHISES E+ EG+PLD                EMVPCF SNIKGEDAFSTLESQID 
Subjt:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE

Query:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID
        ENCARIQRMS EEIAEAQAEIMEKM PAL K LK R                                     ENG+TS  T LK   SGLQNV+VQK D
Subjt:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID

Query:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL
        SGSS WNAWNERVEAVR LRFSLEGNIV S SFQQSEN     HGYSTENV SRDFLRTEG              +    IPGQRVLGLHVISNVL+KA 
Subjt:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL

Query:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF
        LNT+ KQVGS MVKDSSSVDY AIW Y LGPEPELALSLRMCLDDNHNSVILACAEVIQC+LSCNLNETFF  L                 SKPEIN GF
Subjt:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF

Query:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------
        L GGFWKYSAKPSNILP SEDV   EDGEKYTIQDDIVVAQQDI AGLVRMG+LPRLRYLLE                                      
Subjt:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------

Query:  -------------------------VLACSDRKNCIAFVKSGAFQ
                                 VL+ SDRKNCI FVKSGAFQ
Subjt:  -------------------------VLACSDRKNCIAFVKSGAFQ

A0A6J1J5I2 transcriptional elongation regulator MINIYO4.9e-21861.88Show/hide
Query:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG
        MEKKT SSRRSQP+SSARA VFG NALQL+E  ASRLVGGIVEKGISDA+Q+K F S+APP+PSVLPFP ARHRSHGPHWESVTSK GGDNI+DDR+ D 
Subjt:  MEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDG

Query:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNHQ----EEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--
        EEDE LMEIDSIANFANPIQRKKKSSLDFGRWRE V GHNH     EE KV  LAKT  L RAGEA N RDN  MSC+PLS  VLAPSLMN+E+S S+  
Subjt:  EEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNHQ----EEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSE--

Query:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE
                                         ENLQD  DQ G ISES E+ EG+PLD                EMVPCF SNIKGEDAFSTLESQID 
Subjt:  --------------------------------TENLQDVDDQSGHISESAEIDEGMPLD----------------EMVPCFGSNIKGEDAFSTLESQIDE

Query:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID
        ENCARIQRMS EEIAEAQAEIMEKMSPAL+K LK R                                     ENG+TS  T LK   SGLQNV+VQK D
Subjt:  ENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRR-------------------------------------ENGITSVKTTLKDTKSGLQNVSVQKID

Query:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL
        SGSS WNAWNERVEAVR LRFSLEGNIV S SFQQSEN     HGYSTENV SRDFLRTEG              +    IPGQRVLGLHVISNVL+KA 
Subjt:  SGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLHVISNVLNKAL

Query:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF
        LNT  KQVGS MVKD SSVDY AIWAY LGPEPELALSLRMCLDDNHNSVILACAEVIQC+LSCNLNETFF  L                 SKPEIN GF
Subjt:  LNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL-----------------SKPEINVGF

Query:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------
        L GGFWKYSAKPSNILPFSEDV   EDGEKYTIQDDIVVAQQDI AGLVRMG+LPRLRYLLE                                      
Subjt:  LRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE--------------------------------------

Query:  -------------------------VLACSDRKNCIAFVKSGAFQ
                                 VL+ SDRKNCIAFVKSGAFQ
Subjt:  -------------------------VLACSDRKNCIAFVKSGAFQ

SwissProt top hitse value%identityAlignment
A0JN53 RNA polymerase II-associated protein 12.2e-0522.19Show/hide
Query:  GSNIKGEDAFSTLESQIDEENCARIQRMSTEEIAEAQAEIMEKMSPALVKALK----------------------------------------RRENGI-
        G  +KG++A    ++ I EEN AR+Q ++ EEI + Q  ++ ++ P+LV  LK                                        R+EN + 
Subjt:  GSNIKGEDAFSTLESQIDEENCARIQRMSTEEIAEAQAEIMEKMSPALVKALK----------------------------------------RRENGI-

Query:  -----TSVKTTLKDTKSGLQNVSVQKIDSGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENV--TSRDFLRTEGIQVLQIPGQ
              ++  T +     +  V ++K+           ++ +     RFSL+G ++       +  G    HG   E    + ++       QV Q   Q
Subjt:  -----TSVKTTLKDTKSGLQNVSVQKIDSGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENV--TSRDFLRTEGIQVLQIPGQ

Query:  RVLGLHVISNVLNKALLNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPLSKPEINVGFL
        R L LHV++ V+ +A       Q G    +   SV ++ + A  L         LR  LDD  + VI A    ++ +L          P  +  ++  F 
Subjt:  RVLGLHVISNVLNKALLNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPLSKPEINVGFL

Query:  RGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIV------------VAQQDILAGLVRMGILPRLRYLLEV
            W + A    ++P  ED   +++ E+   +                +A+ DI+ GL+   +LPRLRY+LEV
Subjt:  RGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIV------------VAQQDILAGLVRMGILPRLRYLLEV

Q3T1I9 RNA polymerase II-associated protein 14.1e-0421.88Show/hide
Query:  GSNIKGEDAFSTLESQIDEENCARIQRMSTEEIAEAQAEIMEKMSPALVKALK--------------------------RRENGITSVKTTLKDTKSGLQ
        G  ++ + A   +++ I EEN AR+Q M  EEI + Q +++ ++ P+LV  L+                           +E  I S  T    T+  L+
Subjt:  GSNIKGEDAFSTLESQIDEENCARIQRMSTEEIAEAQAEIMEKMSPALVKALK--------------------------RRENGITSVKTTLKDTKSGLQ

Query:  NVSVQKID----------SGSSTW----------NAWNERVEAVR--------LLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENV--TSRDFLRTEGI
        +    K+           + +  W            W + +  +R          RFSL+G ++       +  G    HG   E    + ++       
Subjt:  NVSVQKID----------SGSSTW----------NAWNERVEAVR--------LLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENV--TSRDFLRTEGI

Query:  QVLQIPGQRVLGLHVISNVLNKALLNT-QQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPLS
        QV Q   QR L LHV+S+++ +A       + VGS++                L  +      LR  LDD  +SVI A    ++ +L          P  
Subjt:  QVLQIPGQRVLGLHVISNVLNKALLNT-QQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPLS

Query:  KPEINVGFLRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDI-------------VVAQQDILAGLVRMGILPRLRYLLEV
        +  ++  F     W + A    ++P S D   DED ++   ++ +              +A+ D++ GL+   +LPR RY+LEV
Subjt:  KPEINVGFLRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDI-------------VVAQQDILAGLVRMGILPRLRYLLEV

Q8GYU3 Transcriptional elongation regulator MINIYO8.7e-9540.38Show/hide
Query:  LVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDGEEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVV
        LVG IVEKGIS   +NK      PP+PS+L FP ARHRSHGPH   V S        +D QE+ E +E  M  DSIA FA P+QRK+K  +D GRW+++V
Subjt:  LVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDGEEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVV

Query:  RG------HNHQEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSETENLQDVDDQSGHISESAEIDEGMPLDEMVPCFGSN
         G      H  Q+ +K+  +        + +A     N +++ +                    ++  + V D++  I ++    E +PL+   P   SN
Subjt:  RG------HNHQEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSETENLQDVDDQSGHISESAEIDEGMPLDEMVPCFGSN

Query:  IKG-EDAFSTLESQIDEENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRRENGITSVKTTLKDTKSGLQNVSVQKIDSGSS----------------
          G   A S+LES ID EN A++Q MS +EIAEAQAE+++KM PAL+  LK+R       +  LK  K  +Q VS+    + +S                
Subjt:  IKG-EDAFSTLESQIDEENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRRENGITSVKTTLKDTKSGLQNVSVQKIDSGSS----------------

Query:  --------------TWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLH
                       W+AW ERVEA R LRFS +GN+V       +E G   G     E+   RDFLRTEG              +    IPGQR L LH
Subjt:  --------------TWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLH

Query:  VISNVLNKALLNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL----------------
        ++++VL+KAL    Q ++G    +   S D+ AIWAY LGPEPEL L+LRM LDDNH SV++AC +VIQC+LSC+LNE FF  L                
Subjt:  VISNVLNKALLNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL----------------

Query:  -SKPEINVGFLRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE
         SKPEI++GFLRG +WKYSAKPSNI+ F E++  D   +  TIQ D+ VA QD+ AGLVRM ILPR+ +LLE
Subjt:  -SKPEINVGFLRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE

Q9BWH6 RNA polymerase II-associated protein 14.1e-0421.66Show/hide
Query:  GSNIKGEDAFSTLESQIDEENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRRENGITSV-KTTLKDTKSGLQNVSVQKIDSGSSTWNA---------
        G  ++ ++A    ++ I EEN AR+Q M+ EEI + Q  ++ ++ P+LV  L+   +      +T  ++ + G  + +V K +   S + +         
Subjt:  GSNIKGEDAFSTLESQIDEENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRRENGITSV-KTTLKDTKSGLQNVSVQKIDSGSSTWNA---------

Query:  ----------------------------WNERVEAVR--------LLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENV--TSRDFLRTEGIQVLQIPGQ
                                    W + +  VR          RFSL+G ++       +  G    HG   E    + ++       QV Q   Q
Subjt:  ----------------------------WNERVEAVR--------LLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENV--TSRDFLRTEGIQVLQIPGQ

Query:  RVLGLHVISNVLNKALLNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPLSKPEINVGFL
        R L LHV++ V+++A       Q G    + + SV  + + A  L         LR  LDD  + VI      ++ +L          P  +  ++  F 
Subjt:  RVLGLHVISNVLNKALLNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPLSKPEINVGFL

Query:  RGGFWKYSAKPSNILPFSEDVGTDEDGEKYTI------------QDDIVVAQQDILAGLVRMGILPRLRYLLEV
            W + A    ++P  ED   +++ E+               +    +A+ D++ GL+   +LPRLRY+LEV
Subjt:  RGGFWKYSAKPSNILPFSEDVGTDEDGEKYTI------------QDDIVVAQQDILAGLVRMGILPRLRYLLEV

Arabidopsis top hitse value%identityAlignment
AT4G38440.1 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated protein 1, C-terminal (InterPro:IPR013929), RNA polymerase II-associated protein 1, N-terminal (InterPro:IPR013930); Has 276 Blast hits to 220 proteins in 102 species: Archae - 0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).6.2e-9640.38Show/hide
Query:  LVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDGEEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVV
        LVG IVEKGIS   +NK      PP+PS+L FP ARHRSHGPH   V S        +D QE+ E +E  M  DSIA FA P+QRK+K  +D GRW+++V
Subjt:  LVGGIVEKGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDGEEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVV

Query:  RG------HNHQEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSETENLQDVDDQSGHISESAEIDEGMPLDEMVPCFGSN
         G      H  Q+ +K+  +        + +A     N +++ +                    ++  + V D++  I ++    E +PL+   P   SN
Subjt:  RG------HNHQEEKKVPGLAKTDILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSETENLQDVDDQSGHISESAEIDEGMPLDEMVPCFGSN

Query:  IKG-EDAFSTLESQIDEENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRRENGITSVKTTLKDTKSGLQNVSVQKIDSGSS----------------
          G   A S+LES ID EN A++Q MS +EIAEAQAE+++KM PAL+  LK+R       +  LK  K  +Q VS+    + +S                
Subjt:  IKG-EDAFSTLESQIDEENCARIQRMSTEEIAEAQAEIMEKMSPALVKALKRRENGITSVKTTLKDTKSGLQNVSVQKIDSGSS----------------

Query:  --------------TWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLH
                       W+AW ERVEA R LRFS +GN+V       +E G   G     E+   RDFLRTEG              +    IPGQR L LH
Subjt:  --------------TWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEG--------------IQVLQIPGQRVLGLH

Query:  VISNVLNKALLNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL----------------
        ++++VL+KAL    Q ++G    +   S D+ AIWAY LGPEPEL L+LRM LDDNH SV++AC +VIQC+LSC+LNE FF  L                
Subjt:  VISNVLNKALLNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPL----------------

Query:  -SKPEINVGFLRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE
         SKPEI++GFLRG +WKYSAKPSNI+ F E++  D   +  TIQ D+ VA QD+ AGLVRM ILPR+ +LLE
Subjt:  -SKPEINVGFLRGGFWKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAACTACAGTCTCGCTCGTGAAGCCCATTTTATAGTTTTTTGGCCTCGGGTGGCCATGGCCGATGGCTTCGGGCGGGAGGGTCCAGTCCAGCCCGATTCACA
GTCATTGCAGAATCATACTTCTCTGCGCGCTCTGCAACTAGTCAAGCGGTTGAAAGCAGTTCGATTTTCACTTTCCAGGCGATTCGTGCTCATGGAGAAGAAGACGCACA
GCAGTAGGCGAAGCCAACCTGAAAGCTCGGCCCGGGCAAAGGTATTTGGCGCCAACGCGCTTCAGCTGACCGAGGACGGTGCCTCGCGCTTAGTTGGTGGAATAGTGGAA
AAAGGTATCTCAGACGCACAGCAAAACAAGCTGTTCGACTCACTTGCCCCTCCCAAACCTTCTGTTCTGCCATTTCCAGCCGCTCGGCATCGGTCTCATGGCCCGCATTG
GGAATCAGTAACTAGTAAAAAGGGTGGGGATAACATCAAAGATGACCGGCAGGAGGATGGTGAAGAAGATGAAAGTTTGATGGAGATTGACTCCATAGCAAATTTTGCTA
ATCCAATACAAAGGAAAAAGAAAAGTAGCTTAGACTTTGGCAGGTGGAGAGAGGTTGTTCGAGGCCACAACCATCAAGAGGAAAAGAAAGTTCCAGGCTTAGCAAAAACT
GATATTCTAAAACGTGCTGGGGAAGCAATTAACAACAGGGATAATCTTATGATGTCATGCAAGCCCTTATCAGGTGATGTGCTTGCACCTAGTCTTATGAATGTTGAACA
TAGTTTGTCTGAAACTGAGAATCTTCAAGATGTTGATGATCAATCAGGACATATTTCAGAGAGTGCTGAAATTGATGAGGGAATGCCACTTGATGAAATGGTTCCTTGTT
TTGGGTCCAATATCAAGGGAGAAGATGCATTCTCGACATTGGAGAGCCAGATTGATGAAGAGAACTGTGCTCGAATACAAAGAATGTCAACTGAAGAGATTGCTGAAGCA
CAAGCTGAGATAATGGAGAAGATGAGCCCAGCACTAGTGAAAGCCTTGAAAAGGAGGGAGAACGGCATAACTTCTGTAAAGACAACTTTAAAGGATACAAAGAGTGGGCT
TCAGAACGTTTCAGTGCAGAAAATTGACTCAGGTAGTAGCACATGGAATGCTTGGAACGAAAGGGTTGAAGCAGTTAGGTTGTTAAGGTTTTCCCTGGAAGGGAATATAG
TTGGAAGCTGTTCTTTCCAGCAATCAGAGAATGGTGATTTTTCAGGTCATGGGTACAGCACTGAAAATGTTACTTCACGAGATTTTCTTCGAACTGAGGGGATCCAAGTG
CTGCAGATACCAGGTCAACGTGTCCTTGGGTTGCATGTTATTTCAAATGTGCTTAACAAGGCATTGCTTAATACACAGCAAAAACAAGTTGGTTCCATAATGGTTAAAGA
TAGTAGCTCTGTTGATTACATTGCAATTTGGGCCTATACCCTTGGCCCTGAACCAGAGCTTGCTTTGTCACTGAGGATGTGCCTGGATGATAATCATAACTCAGTCATTC
TAGCCTGTGCTGAAGTTATTCAGTGTATATTGAGCTGTAATTTGAATGAGACCTTCTTTATACCCTTGAGTAAACCAGAGATCAACGTTGGTTTCCTCCGAGGTGGATTT
TGGAAGTACAGTGCTAAACCTTCTAATATTCTTCCTTTTAGTGAAGATGTTGGGACTGATGAAGATGGAGAGAAATATACAATTCAGGATGATATTGTGGTTGCACAACA
AGATATTTTGGCAGGTCTGGTTCGAATGGGAATTCTTCCTAGGCTTCGCTATCTTCTAGAGGTCTTAGCTTGTTCAGACAGGAAGAATTGTATTGCATTTGTAAAAAGCG
GAGCTTTTCAACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAACTACAGTCTCGCTCGTGAAGCCCATTTTATAGTTTTTTGGCCTCGGGTGGCCATGGCCGATGGCTTCGGGCGGGAGGGTCCAGTCCAGCCCGATTCACA
GTCATTGCAGAATCATACTTCTCTGCGCGCTCTGCAACTAGTCAAGCGGTTGAAAGCAGTTCGATTTTCACTTTCCAGGCGATTCGTGCTCATGGAGAAGAAGACGCACA
GCAGTAGGCGAAGCCAACCTGAAAGCTCGGCCCGGGCAAAGGTATTTGGCGCCAACGCGCTTCAGCTGACCGAGGACGGTGCCTCGCGCTTAGTTGGTGGAATAGTGGAA
AAAGGTATCTCAGACGCACAGCAAAACAAGCTGTTCGACTCACTTGCCCCTCCCAAACCTTCTGTTCTGCCATTTCCAGCCGCTCGGCATCGGTCTCATGGCCCGCATTG
GGAATCAGTAACTAGTAAAAAGGGTGGGGATAACATCAAAGATGACCGGCAGGAGGATGGTGAAGAAGATGAAAGTTTGATGGAGATTGACTCCATAGCAAATTTTGCTA
ATCCAATACAAAGGAAAAAGAAAAGTAGCTTAGACTTTGGCAGGTGGAGAGAGGTTGTTCGAGGCCACAACCATCAAGAGGAAAAGAAAGTTCCAGGCTTAGCAAAAACT
GATATTCTAAAACGTGCTGGGGAAGCAATTAACAACAGGGATAATCTTATGATGTCATGCAAGCCCTTATCAGGTGATGTGCTTGCACCTAGTCTTATGAATGTTGAACA
TAGTTTGTCTGAAACTGAGAATCTTCAAGATGTTGATGATCAATCAGGACATATTTCAGAGAGTGCTGAAATTGATGAGGGAATGCCACTTGATGAAATGGTTCCTTGTT
TTGGGTCCAATATCAAGGGAGAAGATGCATTCTCGACATTGGAGAGCCAGATTGATGAAGAGAACTGTGCTCGAATACAAAGAATGTCAACTGAAGAGATTGCTGAAGCA
CAAGCTGAGATAATGGAGAAGATGAGCCCAGCACTAGTGAAAGCCTTGAAAAGGAGGGAGAACGGCATAACTTCTGTAAAGACAACTTTAAAGGATACAAAGAGTGGGCT
TCAGAACGTTTCAGTGCAGAAAATTGACTCAGGTAGTAGCACATGGAATGCTTGGAACGAAAGGGTTGAAGCAGTTAGGTTGTTAAGGTTTTCCCTGGAAGGGAATATAG
TTGGAAGCTGTTCTTTCCAGCAATCAGAGAATGGTGATTTTTCAGGTCATGGGTACAGCACTGAAAATGTTACTTCACGAGATTTTCTTCGAACTGAGGGGATCCAAGTG
CTGCAGATACCAGGTCAACGTGTCCTTGGGTTGCATGTTATTTCAAATGTGCTTAACAAGGCATTGCTTAATACACAGCAAAAACAAGTTGGTTCCATAATGGTTAAAGA
TAGTAGCTCTGTTGATTACATTGCAATTTGGGCCTATACCCTTGGCCCTGAACCAGAGCTTGCTTTGTCACTGAGGATGTGCCTGGATGATAATCATAACTCAGTCATTC
TAGCCTGTGCTGAAGTTATTCAGTGTATATTGAGCTGTAATTTGAATGAGACCTTCTTTATACCCTTGAGTAAACCAGAGATCAACGTTGGTTTCCTCCGAGGTGGATTT
TGGAAGTACAGTGCTAAACCTTCTAATATTCTTCCTTTTAGTGAAGATGTTGGGACTGATGAAGATGGAGAGAAATATACAATTCAGGATGATATTGTGGTTGCACAACA
AGATATTTTGGCAGGTCTGGTTCGAATGGGAATTCTTCCTAGGCTTCGCTATCTTCTAGAGGTCTTAGCTTGTTCAGACAGGAAGAATTGTATTGCATTTGTAAAAAGCG
GAGCTTTTCAACCATGA
Protein sequenceShow/hide protein sequence
MKKNYSLAREAHFIVFWPRVAMADGFGREGPVQPDSQSLQNHTSLRALQLVKRLKAVRFSLSRRFVLMEKKTHSSRRSQPESSARAKVFGANALQLTEDGASRLVGGIVE
KGISDAQQNKLFDSLAPPKPSVLPFPAARHRSHGPHWESVTSKKGGDNIKDDRQEDGEEDESLMEIDSIANFANPIQRKKKSSLDFGRWREVVRGHNHQEEKKVPGLAKT
DILKRAGEAINNRDNLMMSCKPLSGDVLAPSLMNVEHSLSETENLQDVDDQSGHISESAEIDEGMPLDEMVPCFGSNIKGEDAFSTLESQIDEENCARIQRMSTEEIAEA
QAEIMEKMSPALVKALKRRENGITSVKTTLKDTKSGLQNVSVQKIDSGSSTWNAWNERVEAVRLLRFSLEGNIVGSCSFQQSENGDFSGHGYSTENVTSRDFLRTEGIQV
LQIPGQRVLGLHVISNVLNKALLNTQQKQVGSIMVKDSSSVDYIAIWAYTLGPEPELALSLRMCLDDNHNSVILACAEVIQCILSCNLNETFFIPLSKPEINVGFLRGGF
WKYSAKPSNILPFSEDVGTDEDGEKYTIQDDIVVAQQDILAGLVRMGILPRLRYLLEVLACSDRKNCIAFVKSGAFQP