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Sgr011560 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr011560
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionpentatricopeptide repeat-containing protein At1g62350
Genome locationtig00152985:65017..65463
RNA-Seq ExpressionSgr011560
SyntenySgr011560
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044795 - Pentatricopeptide repeat-containing protein THA8L-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588226.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4281.51Show/hide
Query:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLR APNLLRR SN AT+TI  + F+   FF+H + QQQLL RFIT SASSP+LSIWRRKKEMGKEGLI VKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKV
        VAVLVELQRQNQVFLCMK+
Subjt:  VAVLVELQRQNQVFLCMKV

KAG7022139.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-4281.51Show/hide
Query:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLR APNLLRR SN AT+TI  + F+   FF+H + QQQLL RFIT SASSP+LSIWRRKKEMGKEGLI VKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKV
        VAVLVELQRQNQVFLCMK+
Subjt:  VAVLVELQRQNQVFLCMKV

XP_022153223.1 pentatricopeptide repeat-containing protein At1g62350 [Momordica charantia]7.9e-4484.3Show/hide
Query:  MLRLAPNLLRRTSNRA--TATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKS
        MLRL PNLLRR  NR   TATIPFHL SP  FF  DQ+QQQ L RFIT SASSP+LSIWRRKKEMGKEGLI VKELKRLQSNLIRLDRFISSHVSRLLKS
Subjt:  MLRLAPNLLRRTSNRA--TATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKS

Query:  DLVAVLVELQRQNQVFLCMKV
        DLVAVLVELQRQ QVFLCMK+
Subjt:  DLVAVLVELQRQNQVFLCMKV

XP_022966084.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima]1.5e-4282.35Show/hide
Query:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLR APNLLRR SN AT+TI  + F+   FF+H + QQQLL RFIT SASSP+LSIWRRKKEMGKEGLI VKELKRLQSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKV
        VAVLVELQRQNQVFLCMK+
Subjt:  VAVLVELQRQNQVFLCMKV

XP_023531705.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita pepo subsp. pepo]8.7e-4381.51Show/hide
Query:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLR APNLLRR SNRAT+TI  + F+   FF+H + QQQLL RFIT SASSP+LS+WRRKKEMGKEGLI VKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKV
        VAVLVELQRQNQVFLCMK+
Subjt:  VAVLVELQRQNQVFLCMKV

TrEMBL top hitse value%identityAlignment
A0A0A0LXS9 Uncharacterized protein2.6e-4079.66Show/hide
Query:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLRLAPNLLR+ S+   ++ PFH FS   F   D +QQQLL RFIT SASSP+LSIWRRKKEMGKEGLI VKELKRLQSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMK
        VAVLVELQRQN VFLCMK
Subjt:  VAVLVELQRQNQVFLCMK

A0A5D3DWI7 Pentatricopeptide repeat-containing protein1.6e-4271.94Show/hide
Query:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLRLAPNLLR+ S+   ++ PFH FS   F   D +QQQLL RFI  SASSP+LSIWRRKKEMGKEGLI VKELKRLQSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKVLPSSALFLSISFPSIAYISF
        VAVLVELQRQN VFLCMKV P     L   FP +A++ F
Subjt:  VAVLVELQRQNQVFLCMKVLPSSALFLSISFPSIAYISF

A0A6J1DGX4 pentatricopeptide repeat-containing protein At1g623503.8e-4484.3Show/hide
Query:  MLRLAPNLLRRTSNRA--TATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKS
        MLRL PNLLRR  NR   TATIPFHL SP  FF  DQ+QQQ L RFIT SASSP+LSIWRRKKEMGKEGLI VKELKRLQSNLIRLDRFISSHVSRLLKS
Subjt:  MLRLAPNLLRRTSNRA--TATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKS

Query:  DLVAVLVELQRQNQVFLCMKV
        DLVAVLVELQRQ QVFLCMK+
Subjt:  DLVAVLVELQRQNQVFLCMKV

A0A6J1EQI1 pentatricopeptide repeat-containing protein At1g623501.0e-4180.67Show/hide
Query:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLR APNLLRR SN AT+TI  +  +   FF+H + QQQLL RFIT SASSP+LSIWRRKKEMGKEGLI VKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKV
        VAVLVELQRQNQVFLCMK+
Subjt:  VAVLVELQRQNQVFLCMKV

A0A6J1HQL7 pentatricopeptide repeat-containing protein At1g623507.2e-4382.35Show/hide
Query:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLR APNLLRR SN AT+TI  + F+   FF+H + QQQLL RFIT SASSP+LSIWRRKKEMGKEGLI VKELKRLQSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKV
        VAVLVELQRQNQVFLCMK+
Subjt:  VAVLVELQRQNQVFLCMKV

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623503.8e-1780.7Show/hide
Query:  MGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKV
        M KEGLIA KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQNQVFLCMK+
Subjt:  MGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKV

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.1e-0847.06Show/hide
Query:  PTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKV
        P   +WR KK +GKE L  +  LKRL+ +  +LD+FI +HV RLLK D++AV+ EL+RQ +  L +K+
Subjt:  PTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKV

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein2.7e-1880.7Show/hide
Query:  MGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKV
        M KEGLIA KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQNQVFLCMK+
Subjt:  MGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKV

AT3G42570.1 peroxidase family protein7.4e-0879.41Show/hide
Query:  KKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVS
        KKE  KEGLIA KELKRLQ+NL+RLDRFI SH S
Subjt:  KKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVS

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein7.9e-1047.06Show/hide
Query:  PTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKV
        P   +WR KK +GKE L  +  LKRL+ +  +LD+FI +HV RLLK D++AV+ EL+RQ +  L +K+
Subjt:  PTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCGTCTTGCTCCAAATCTTCTTCGAAGAACATCAAACAGGGCTACTGCAACAATCCCTTTTCATCTCTTTTCCCCGTACCCATTCTTCCAACACGATCAAGTACA
GCAACAATTGCTGCCACGCTTTATCACTGCCTCCGCTTCCAGCCCTACCCTCTCCATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTCTAATCGCCGTCAAAGAGC
TCAAGAGGCTTCAGTCCAATCTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTTGTCGCAGTTCTCGTGGAGCTTCAGAGACAA
AACCAGGTCTTTCTATGCATGAAGGTCCTACCCTCTTCTGCTCTCTTTCTCTCTATCTCTTTTCCCTCCATTGCATATATTAGCTTTTTCAGGAAGATAAAGTTGTATGG
TTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGCGTCTTGCTCCAAATCTTCTTCGAAGAACATCAAACAGGGCTACTGCAACAATCCCTTTTCATCTCTTTTCCCCGTACCCATTCTTCCAACACGATCAAGTACA
GCAACAATTGCTGCCACGCTTTATCACTGCCTCCGCTTCCAGCCCTACCCTCTCCATATGGAGGAGGAAGAAGGAGATGGGCAAGGAGGGTCTAATCGCCGTCAAAGAGC
TCAAGAGGCTTCAGTCCAATCTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTTGTCGCAGTTCTCGTGGAGCTTCAGAGACAA
AACCAGGTCTTTCTATGCATGAAGGTCCTACCCTCTTCTGCTCTCTTTCTCTCTATCTCTTTTCCCTCCATTGCATATATTAGCTTTTTCAGGAAGATAAAGTTGTATGG
TTCTTAG
Protein sequenceShow/hide protein sequence
MLRLAPNLLRRTSNRATATIPFHLFSPYPFFQHDQVQQQLLPRFITASASSPTLSIWRRKKEMGKEGLIAVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQ
NQVFLCMKVLPSSALFLSISFPSIAYISFFRKIKLYGS