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Sgr011686 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr011686
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionE3 ubiquitin-protein ligase RFWD3 isoform X1
Genome locationtig00153033:125202..125567
RNA-Seq ExpressionSgr011686
SyntenySgr011686
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0036297 - interstrand cross-link repair (biological process)
GO:0005634 - nucleus (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR037381 - E3 ubiquitin-protein ligase RFWD3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595223.1 E3 ubiquitin-protein ligase RFWD3, partial [Cucurbita argyrosperma subsp. sororia]3.7e-2664.86Show/hide
Query:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN---------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICM
        E++DDGEE DDGEE  E HA+E+ DNV EA                      WVEEEEDK RRTE GEASSSNGVGS+E SQG EWNRNEIDGLFCPICM
Subjt:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN---------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICM

Query:  GAWTNYVDHHI
         AWTNY DHHI
Subjt:  GAWTNYVDHHI

KAG7027244.1 E3 ubiquitin-protein ligase RFWD3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-2664.86Show/hide
Query:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN---------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICM
        E++DDGEE DDGEE  E HA+E+ DNV EA                      WVEEEEDK RRTE GEASSSNGVGS+E SQG EWNRNEIDGLFCPICM
Subjt:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN---------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICM

Query:  GAWTNYVDHHI
         AWTNY DHHI
Subjt:  GAWTNYVDHHI

XP_022143754.1 E3 ubiquitin-protein ligase RFWD3 isoform X1 [Momordica charantia]9.8e-2762.3Show/hide
Query:  GEDDDDG-----------EEEDDGEEIEEEHAKEDVDNVFEA--------------------NWVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRN
        G DDDD            E EDDGEE EEEHA+ED D+V E                     NWVEEEEDK RRTE GEASSSNGVGSVE SQG+EWNRN
Subjt:  GEDDDDG-----------EEEDDGEEIEEEHAKEDVDNVFEA--------------------NWVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRN

Query:  EIDGLFCPICMGAWTNYVDHHI
        EIDGLFCPICM AWTNY DHHI
Subjt:  EIDGLFCPICMGAWTNYVDHHI

XP_022972717.1 E3 ubiquitin-protein ligase RFWD3 isoform X1 [Cucurbita maxima]1.4e-2565.14Show/hide
Query:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA
        E++DD EE DDGEE  E HA+E+ DNV EA                    WVEEEEDK RRT+ GEASSSNGVGSVE SQG EWNRNEIDGLFCPICM A
Subjt:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA

Query:  WTNYVDHHI
        WTNY DHHI
Subjt:  WTNYVDHHI

XP_023518105.1 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RFWD3 [Cucurbita pepo subsp. pepo]1.4e-2565.14Show/hide
Query:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA
        E++DD EE DDGEE  E HA+E+ DNV EA                    WVEEEEDK RRTE GEASSSNGVGS+E SQG EWNRNEIDGLFCPICM A
Subjt:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA

Query:  WTNYVDHHI
        WTNY DHHI
Subjt:  WTNYVDHHI

TrEMBL top hitse value%identityAlignment
A0A6J1CQ96 E3 ubiquitin-protein ligase RFWD3 isoform X14.7e-2762.3Show/hide
Query:  GEDDDDG-----------EEEDDGEEIEEEHAKEDVDNVFEA--------------------NWVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRN
        G DDDD            E EDDGEE EEEHA+ED D+V E                     NWVEEEEDK RRTE GEASSSNGVGSVE SQG+EWNRN
Subjt:  GEDDDDG-----------EEEDDGEEIEEEHAKEDVDNVFEA--------------------NWVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRN

Query:  EIDGLFCPICMGAWTNYVDHHI
        EIDGLFCPICM AWTNY DHHI
Subjt:  EIDGLFCPICMGAWTNYVDHHI

A0A6J1HFZ1 E3 ubiquitin-protein ligase RFWD3 isoform X22.6e-2564.22Show/hide
Query:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA
        E++DD EE DDGEE  E HA+E+ DNV EA                    WVEEEEDK RRTE GE SSSNGVGSVE SQG EWNRNEIDGLFCPICM A
Subjt:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA

Query:  WTNYVDHHI
        WTNY +HHI
Subjt:  WTNYVDHHI

A0A6J1I5M2 E3 ubiquitin-protein ligase RFWD3 isoform X16.8e-2665.14Show/hide
Query:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA
        E++DD EE DDGEE  E HA+E+ DNV EA                    WVEEEEDK RRT+ GEASSSNGVGSVE SQG EWNRNEIDGLFCPICM A
Subjt:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA

Query:  WTNYVDHHI
        WTNY DHHI
Subjt:  WTNYVDHHI

A0A6J1IAX3 E3 ubiquitin-protein ligase RFWD3 isoform X26.8e-2665.14Show/hide
Query:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA
        E++DD EE DDGEE  E HA+E+ DNV EA                    WVEEEEDK RRT+ GEASSSNGVGSVE SQG EWNRNEIDGLFCPICM A
Subjt:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA

Query:  WTNYVDHHI
        WTNY DHHI
Subjt:  WTNYVDHHI

A0A6J1ICD9 E3 ubiquitin-protein ligase RFWD3 isoform X36.8e-2665.14Show/hide
Query:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA
        E++DD EE DDGEE  E HA+E+ DNV EA                    WVEEEEDK RRT+ GEASSSNGVGSVE SQG EWNRNEIDGLFCPICM A
Subjt:  EDDDDGEEEDDGEEIEEEHAKEDVDNVFEAN-------------------WVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGA

Query:  WTNYVDHHI
        WTNY DHHI
Subjt:  WTNYVDHHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCCGGTGACGCAGGGCGAAGATGATGACGACGGGGAAGAAGAAGATGATGGCGAGGAAATAGAGGAAGAGCATGCAAAGGAGGATGTCGACAATGTTTTTGAGGC
GAATTGGGTTGAGGAAGAGGAAGACAAGTGGAGAAGAACCGAGGTAGGAGAAGCGAGTTCTTCGAATGGAGTTGGAAGCGTGGAATTTTCACAAGGAATTGAATGGAATC
GAAATGAAATCGACGGCTTGTTTTGCCCTATTTGCATGGGGGCATGGACCAACTACGTTGACCACCATATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCCGGTGACGCAGGGCGAAGATGATGACGACGGGGAAGAAGAAGATGATGGCGAGGAAATAGAGGAAGAGCATGCAAAGGAGGATGTCGACAATGTTTTTGAGGC
GAATTGGGTTGAGGAAGAGGAAGACAAGTGGAGAAGAACCGAGGTAGGAGAAGCGAGTTCTTCGAATGGAGTTGGAAGCGTGGAATTTTCACAAGGAATTGAATGGAATC
GAAATGAAATCGACGGCTTGTTTTGCCCTATTTGCATGGGGGCATGGACCAACTACGTTGACCACCATATTTAG
Protein sequenceShow/hide protein sequence
MLPVTQGEDDDDGEEEDDGEEIEEEHAKEDVDNVFEANWVEEEEDKWRRTEVGEASSSNGVGSVEFSQGIEWNRNEIDGLFCPICMGAWTNYVDHHI