; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr011854 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr011854
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionregulator of nonsense transcripts UPF3-like
Genome locationtig00153101:63315..71310
RNA-Seq ExpressionSgr011854
SyntenySgr011854
Gene Ontology termsGO:0000184 - nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (biological process)
GO:0045727 - positive regulation of translation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR005120 - UPF3 domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR039722 - Nonsense-mediated mRNA decay protein 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00427.1 regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo var. makuwa]8.8e-25787.48Show/hide
Query:  SQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRLTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ
        +QKDQRY+RAYIDFTR EDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR +TKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ
Subjt:  SQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRLTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ

Query:  SGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVA
        SG AKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFIL+PRR+DQSA SSGIGISDV 
Subjt:  SGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVA

Query:  TADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSG
        TAD GKKKILLLKGKERDISHV+D MLQLQSATSSGNSP++A+K N RREAGGS+IRSILLN+EARHGQSS+V QSH+KIQILNSDNGKRPPRP N+RSG
Subjt:  TADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSG

Query:  SNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSR
        SND+S+NEPNPSG+EGDG+RAP++KFSKKELHGLGSASEKQ+KRIRNKDRPDRGVWAPRSRSDASVSQ +ESSVSQSSHLLSDSVEAYRGEMK+DIHGSR
Subjt:  SNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSR

Query:  TGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGHEKQVWVQKSSTDRDDVYAVQQIMASRQDYGSSNFQGDYLHSEDLMH
        T DVTT VSGR+SSVENGSVRHV RRGAGHVMKDDGSLNPNEGK SKRGV  GHE                    I+ASRQDYGSSNFQGDYLHSEDLMH
Subjt:  TGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGHEKQVWVQKSSTDRDDVYAVQQIMASRQDYGSSNFQGDYLHSEDLMH

Query:  ILRRHHHVKWRYALEAVGNSNRFRELDCKICNCFVVVYRCLSN
        ILRR HHVKWRYALEAVGNSNRFRELDCK CNCF VVYR L N
Subjt:  ILRRHHHVKWRYALEAVGNSNRFRELDCKICNCFVVVYRCLSN

XP_008459659.1 PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo]2.2e-25590.61Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLER KVVIRHLPPSLS SDLFHHI DRFAGR+NW YYRPGK+SQKDQRY+RAYIDFTR EDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
         +TKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSG AKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFIL+PRR+DQSA SSGIGISDV  AD GKKKILLLKGKERDISHV+D MLQLQSATSSGNSP++A+K N RREAGGS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS

Query:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        +IRSILLN+EARHGQSS+V QSH+KIQILNSDNGKRPPRP N+RSGSND+S+NEPNPSG+EGDG+RAP++KFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH
        VWAPRSRSDASVSQ +ESSVSQSSHLLSDSVEAYRGEMK+DIHGSRT DVTT VSGR+SSVENGSVRHV RRGAGHVMKDDGSLNPNEGK SKRGV  GH
Subjt:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH

Query:  EKQVWVQKSST
        EKQVWVQKSS+
Subjt:  EKQVWVQKSST

XP_011656113.1 regulator of nonsense transcripts UPF3 isoform X1 [Cucumis sativus]1.8e-25490.41Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLER KVVIRHLPPSLS SDLFHHI DRFAGR+NW YYRPGK+SQKDQRY+RAYIDFTR EDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
         +TKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSG AKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFIL+PRREDQSATSS IGISDV TAD GKKKILLLKGKERDISHV+D MLQLQSATSSGNSP++A+K N RREAGG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS

Query:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        +IRSILLN+EARHGQSS+V QSH+KIQILNSDNGKRPPRP N+RSGSND+S+NEPNPSG+EGDG+RA ++KFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH
        VWAPRSRSDASVSQ +ESSV QSSHLLSDSVEA+RGEMK+DIHGSRTGDVTT VSGR+SSVENGSVRHV RRGAGHVMKDDGSLNPNEGK SKRGV  GH
Subjt:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH

Query:  EKQVWVQKSST
        EKQVWVQKSS+
Subjt:  EKQVWVQKSST

XP_022149973.1 regulator of nonsense transcripts UPF3 isoform X1 [Momordica charantia]5.0e-26092.17Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLER KVVIRHLPPSL  SDLFHHIDDRFAGRYNWCYYRPGK+SQKDQRYSRAYIDFTR EDVFEFAEFFDGHVFVNEKG QYKAV+EYAPSQRVPR
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
         +TKKDGR+GTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSV RKVKRGG ASSRKPESNSMKR
Subjt:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFIL+PRR+DQ ATSSGIGISDV TADSGKKKILLLKGKERDISHVADGML LQSA+SSGNSP+TATKQNQRREA GS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS

Query:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        LIRSILLN+E RHGQ S+V QSH+KIQILNSDNGKRPPRPIN+RSGSNDMSNNEPNPSG+EGDG+RAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH
        VWAPRSRSDA VSQ DESS+SQSSHLLSDSVEA+R EMKDDIHGSRTGDVTTTVSGR SSVENGSVRHV RRGAGHVMKDDGSLNPNEGKSSKRG+  GH
Subjt:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH

Query:  EKQVWVQKSST
        EKQVWVQKSS+
Subjt:  EKQVWVQKSST

XP_022973412.1 regulator of nonsense transcripts UPF3-like isoform X1 [Cucurbita maxima]7.0e-25490.02Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLER KVVIRHLPPSL  SDLFHHI DRFAGRYNWCY+RPGK+SQK+QRY+RAYIDFT  EDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
         ++KKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAK+TPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRG AASSRK ESNSMKR
Subjt:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS
        GMEKKKYILKDS KNTNRRDKSNFIL+PRREDQSATSSGIGISDV TADSGKKKILLLKGK RD+SH+ADGMLQ QSATSSGNSP+ ATKQNQRREAGGS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS

Query:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        +IRSILLN++ARHGQSS+V QSH+KIQILNSDNGKRPPRPINSRSGSNDMS+N+PNPSG+EGDG+RA E+KF+KKE HGLG+ASEKQEKRIRNKDRPDRG
Subjt:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH
        VWAPR RSDASVSQ DESSVSQS+HLLSDSVEAYRGEMKDD+HGSRTGDVTTTVSGRSSSVENGSVRHV RRGA H+MKDDGSLNPNEGK SKRGV  GH
Subjt:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH

Query:  EKQVWVQKSST
        EKQVWVQKSS+
Subjt:  EKQVWVQKSST

TrEMBL top hitse value%identityAlignment
A0A0A0KSY5 Smg4_UPF3 domain-containing protein8.9e-25590.41Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLER KVVIRHLPPSLS SDLFHHI DRFAGR+NW YYRPGK+SQKDQRY+RAYIDFTR EDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
         +TKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSG AKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFIL+PRREDQSATSS IGISDV TAD GKKKILLLKGKERDISHV+D MLQLQSATSSGNSP++A+K N RREAGG 
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS

Query:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        +IRSILLN+EARHGQSS+V QSH+KIQILNSDNGKRPPRP N+RSGSND+S+NEPNPSG+EGDG+RA ++KFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH
        VWAPRSRSDASVSQ +ESSV QSSHLLSDSVEA+RGEMK+DIHGSRTGDVTT VSGR+SSVENGSVRHV RRGAGHVMKDDGSLNPNEGK SKRGV  GH
Subjt:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH

Query:  EKQVWVQKSST
        EKQVWVQKSS+
Subjt:  EKQVWVQKSST

A0A1S3CB69 regulator of nonsense transcripts UPF3 isoform X11.0e-25590.61Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLER KVVIRHLPPSLS SDLFHHI DRFAGR+NW YYRPGK+SQKDQRY+RAYIDFTR EDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
         +TKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSG AKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
Subjt:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFIL+PRR+DQSA SSGIGISDV  AD GKKKILLLKGKERDISHV+D MLQLQSATSSGNSP++A+K N RREAGGS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS

Query:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        +IRSILLN+EARHGQSS+V QSH+KIQILNSDNGKRPPRP N+RSGSND+S+NEPNPSG+EGDG+RAP++KFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH
        VWAPRSRSDASVSQ +ESSVSQSSHLLSDSVEAYRGEMK+DIHGSRT DVTT VSGR+SSVENGSVRHV RRGAGHVMKDDGSLNPNEGK SKRGV  GH
Subjt:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH

Query:  EKQVWVQKSST
        EKQVWVQKSS+
Subjt:  EKQVWVQKSST

A0A5D3BML0 Regulator of nonsense transcripts UPF3 isoform X14.3e-25787.48Show/hide
Query:  SQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRLTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ
        +QKDQRY+RAYIDFTR EDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR +TKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ
Subjt:  SQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRLTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQ

Query:  SGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVA
        SG AKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFIL+PRR+DQSA SSGIGISDV 
Subjt:  SGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVA

Query:  TADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSG
        TAD GKKKILLLKGKERDISHV+D MLQLQSATSSGNSP++A+K N RREAGGS+IRSILLN+EARHGQSS+V QSH+KIQILNSDNGKRPPRP N+RSG
Subjt:  TADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSG

Query:  SNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSR
        SND+S+NEPNPSG+EGDG+RAP++KFSKKELHGLGSASEKQ+KRIRNKDRPDRGVWAPRSRSDASVSQ +ESSVSQSSHLLSDSVEAYRGEMK+DIHGSR
Subjt:  SNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSR

Query:  TGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGHEKQVWVQKSSTDRDDVYAVQQIMASRQDYGSSNFQGDYLHSEDLMH
        T DVTT VSGR+SSVENGSVRHV RRGAGHVMKDDGSLNPNEGK SKRGV  GHE                    I+ASRQDYGSSNFQGDYLHSEDLMH
Subjt:  TGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGHEKQVWVQKSSTDRDDVYAVQQIMASRQDYGSSNFQGDYLHSEDLMH

Query:  ILRRHHHVKWRYALEAVGNSNRFRELDCKICNCFVVVYRCLSN
        ILRR HHVKWRYALEAVGNSNRFRELDCK CNCF VVYR L N
Subjt:  ILRRHHHVKWRYALEAVGNSNRFRELDCKICNCFVVVYRCLSN

A0A6J1D8M3 regulator of nonsense transcripts UPF3 isoform X12.4e-26092.17Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLER KVVIRHLPPSL  SDLFHHIDDRFAGRYNWCYYRPGK+SQKDQRYSRAYIDFTR EDVFEFAEFFDGHVFVNEKG QYKAV+EYAPSQRVPR
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
         +TKKDGR+GTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSV RKVKRGG ASSRKPESNSMKR
Subjt:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS
        GMEKKKYILKDSVKNTNRRDKSNFIL+PRR+DQ ATSSGIGISDV TADSGKKKILLLKGKERDISHVADGML LQSA+SSGNSP+TATKQNQRREA GS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS

Query:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        LIRSILLN+E RHGQ S+V QSH+KIQILNSDNGKRPPRPIN+RSGSNDMSNNEPNPSG+EGDG+RAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG
Subjt:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH
        VWAPRSRSDA VSQ DESS+SQSSHLLSDSVEA+R EMKDDIHGSRTGDVTTTVSGR SSVENGSVRHV RRGAGHVMKDDGSLNPNEGKSSKRG+  GH
Subjt:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH

Query:  EKQVWVQKSST
        EKQVWVQKSS+
Subjt:  EKQVWVQKSST

A0A6J1I7G4 regulator of nonsense transcripts UPF3-like isoform X13.4e-25490.02Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MKDPLER KVVIRHLPPSL  SDLFHHI DRFAGRYNWCY+RPGK+SQK+QRY+RAYIDFT  EDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR
         ++KKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAK+TPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRG AASSRK ESNSMKR
Subjt:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS
        GMEKKKYILKDS KNTNRRDKSNFIL+PRREDQSATSSGIGISDV TADSGKKKILLLKGK RD+SH+ADGMLQ QSATSSGNSP+ ATKQNQRREAGGS
Subjt:  GMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGS

Query:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG
        +IRSILLN++ARHGQSS+V QSH+KIQILNSDNGKRPPRPINSRSGSNDMS+N+PNPSG+EGDG+RA E+KF+KKE HGLG+ASEKQEKRIRNKDRPDRG
Subjt:  LIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRG

Query:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH
        VWAPR RSDASVSQ DESSVSQS+HLLSDSVEAYRGEMKDD+HGSRTGDVTTTVSGRSSSVENGSVRHV RRGA H+MKDDGSLNPNEGK SKRGV  GH
Subjt:  VWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGH

Query:  EKQVWVQKSST
        EKQVWVQKSS+
Subjt:  EKQVWVQKSST

SwissProt top hitse value%identityAlignment
B0S733 Regulator of nonsense transcripts 3A2.4e-1527.01Show/hide
Query:  AKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV-PRLTTKKD
        +KVVIR LPPSLS+  L  H+       +++  + P   S     +SRAYI+F   ED+  F + FDG+VF++ KG +Y AVVE+AP Q+V  +   KKD
Subjt:  AKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV-PRLTTKKD

Query:  GREGTIYKDPDYLEFL--------KLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSM
         + GTI +DP+Y  FL        K +A P   L   EI+ + +E     +AK T   TPL+E+++ K+  +   +      + +R      ++ E    
Subjt:  GREGTIYKDPDYLEFL--------KLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSM

Query:  KRGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGK-ERDISHVADGMLQLQSATSSGNSPSTATKQNQRREA
        +R  E++K   K++ K     +K   I + ++ D+        + D    DSG+ +    K + E+   H          +  S ++ S      ++RE 
Subjt:  KRGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGK-ERDISHVADGMLQLQSATSSGNSPSTATKQNQRREA

Query:  GGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRP
         G   R    +H  R           +K Q  + +  K   R   ++ G     +                  K  K++   +GS  E    RIRNKDRP
Subjt:  GGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRP

Query:  DRGVWAPRSRS
           ++ P +R+
Subjt:  DRGVWAPRSRS

Q10267 Nonsense-mediated mRNA decay protein 34.7e-1125.47Show/hide
Query:  KVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSS--QKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRLTTKKD
        KV++ +LPP+L +      I+  F     W  +  GK++   + +  S AY+ F     V EF   + GH F+++K   Y+A+V  AP Q++P    K D
Subjt:  KVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSS--QKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRLTTKKD

Query:  GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKR--AVESGTQGSSVPRKVKRGGAASSRKPESNSMKRG---
          EG++ +DP + EF              + +   + A    V ++    TPL++++ +K+   VE G    S      +     + KP SN+ K G   
Subjt:  GREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKR--AVESGTQGSSVPRKVKRGGAASSRKPESNSMKRG---

Query:  MEKKK----------YILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATAD---SGKKKI
         E KK           ++K+   +  ++ K      P   + +A+ +    SD  T +   SGK+KI
Subjt:  MEKKK----------YILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATAD---SGKKKI

Q9BZI7 Regulator of nonsense transcripts 3B8.9e-1826.9Show/hide
Query:  AKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRLTTKK-D
        +KVVIR LPP+L++  L  H+       +++  +    +S     Y+RAYI+F   ED+  F + FDG+VF++ KG +Y A+VE+AP Q+  +  TKK D
Subjt:  AKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRLTTKK-D

Query:  GREGTIYKDPDYLEFLKLIAKPAEHLPSA-EIQLERKEAE-QSGVAKETPIVTPLMEFVRQKRAVESGTQGS----SVPRKVKRGGAASSRKPESNSMKR
         + GTI  DP+Y +FL+  A   E + S  E  LE  EA+ +  +AK+T   TPL+ F++ K+ +    +       + RK +R       K E    ++
Subjt:  GREGTIYKDPDYLEFLKLIAKPAEHLPSA-EIQLERKEAE-QSGVAKETPIVTPLMEFVRQKRAVESGTQGS----SVPRKVKRGGAASSRKPESNSMKR

Query:  GMEKKKYI----LKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKIL--LLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQR
         +EK K I     +D +K+  +     F+L      Q+     +    +   + G +K L    K K+ D  +++D     QS T    S S    +  +
Subjt:  GMEKKKYI----LKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKIL--LLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQR

Query:  REAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEK-----
        R    S  R               +++  ++++    +  ++  R    ++        +      E D  R    K    E  G    +EK+E+     
Subjt:  REAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEK-----

Query:  RIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSS
        RIRNKDRP   ++ P +RS   +   D+S+ S  S
Subjt:  RIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSS

Q9FVW4 Regulator of nonsense transcripts UPF36.2e-11247.64Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MK+PL++ KVV+RHLPPSLSQSDL   ID RFA RYNW  +RPGKSS K+Q+YSRAY+ F   EDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK
         + KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSG +K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP     K
Subjt:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATA--------------DSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSP
        R  EKKKY+ K+S KN  R+  ++ +   + + + + SSG  +    TA              DSGKKKILLL+ K+RD         +    T+   + 
Subjt:  RGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATA--------------DSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSP

Query:  STATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASE
        ST ++QNQ+ + GG LI+ ILL +++R  QSST VQS ++++   ++N KRP RP N+R+G                            K+ H  G+ SE
Subjt:  STATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASE

Query:  KQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLN
        KQE+R RNKDRPDR +WAP  R D S    ++  +S + +          GE+KD +   R+G+V  +  G   ++ENGS RH +RR  G   K++  + 
Subjt:  KQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLN

Query:  PNEGKSSKRGVGSG---HEKQVWVQKSST
          EGK+S+RG G G   HEKQ+W+QK S+
Subjt:  PNEGKSSKRGVGSG---HEKQVWVQKSST

Q9H1J1 Regulator of nonsense transcripts 3A1.4e-1024.16Show/hide
Query:  AKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV-PRLTTKKD
        +KVVIR LPP L++  L   +  R    +++  +     S     YSRAYI+F   +D+  F + FDG++F++ KG +Y AVVE+AP Q++  +   KKD
Subjt:  AKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV-PRLTTKKD

Query:  GREGTIYKDPDYLEFLKLIAKPAEHL-PSAEIQLERKEAE-QSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEK
         + G+I  DP+Y +FL+      E    + E  L   EA+ +  +A+ T   TPL+E+++ ++  +   +     R+ +R      ++      +R  E+
Subjt:  GREGTIYKDPDYLEFLKLIAKPAEHL-PSAEIQLERKEAE-QSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEK

Query:  KKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTAT-KQNQRREAGGSLIR
        ++   K++ K     +K   I + ++ ++          +  T +  K+     +G+E D              T  G   S A     + R   GSL  
Subjt:  KKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTAT-KQNQRREAGGSLIR

Query:  SILLNHEARHGQSSTVVQSHK---KIQILNSDNGKR-----PPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASE------KQEK
            +H     +   V +S +   + Q  + D+G+R      P  ++ RS         P   G +   + + +S    + +  LG A         +++
Subjt:  SILLNHEARHGQSSTVVQSHK---KIQILNSDNGKR-----PPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASE------KQEK

Query:  RIRNKDRPDRGVWAPRSR
        R+ NKDRP   ++ P +R
Subjt:  RIRNKDRPDRGVWAPRSR

Arabidopsis top hitse value%identityAlignment
AT1G33980.1 Smg-4/UPF3 family protein4.4e-11347.64Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR
        MK+PL++ KVV+RHLPPSLSQSDL   ID RFA RYNW  +RPGKSS K+Q+YSRAY+ F   EDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRVP+
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPR

Query:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK
         + KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSG +K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP     K
Subjt:  LTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNSMK

Query:  RGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATA--------------DSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSP
        R  EKKKY+ K+S KN  R+  ++ +   + + + + SSG  +    TA              DSGKKKILLL+ K+RD         +    T+   + 
Subjt:  RGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATA--------------DSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSP

Query:  STATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASE
        ST ++QNQ+ + GG LI+ ILL +++R  QSST VQS ++++   ++N KRP RP N+R+G                            K+ H  G+ SE
Subjt:  STATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASE

Query:  KQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLN
        KQE+R RNKDRPDR +WAP  R D S    ++  +S + +          GE+KD +   R+G+V  +  G   ++ENGS RH +RR  G   K++  + 
Subjt:  KQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLN

Query:  PNEGKSSKRGVGSG---HEKQVWVQKSST
          EGK+S+RG G G   HEKQ+W+QK S+
Subjt:  PNEGKSSKRGVGSG---HEKQVWVQKSST

AT1G33980.2 Smg-4/UPF3 family protein4.1e-11147.27Show/hide
Query:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKS--SQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV
        MK+PL++ KVV+RHLPPSLSQSDL   ID RFA RYNW  +RPGKS    K+Q+YSRAY+ F   EDV+EFA FF+GHVFVNEKGAQ+KA+VEYAPSQRV
Subjt:  MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKS--SQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRV

Query:  PRLTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNS
        P+ + KKD REG+I KDPDYLEFLK+IA+P E+LPSAEIQLER+EAEQSG +K  PIVTPLMEF+RQKRA   G QG S + R  +R    S+ KP    
Subjt:  PRLTTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQG-SSVPRKVKRGGAASSRKPESNS

Query:  MKRGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATA--------------DSGKKKILLLKGKERDISHVADGMLQLQSATSSGN
         KR  EKKKY+ K+S KN  R+  ++ +   + + + + SSG  +    TA              DSGKKKILLL+ K+RD         +    T+   
Subjt:  MKRGMEKKKYILKDSVKNTNRRDKSNFILMPRREDQSATSSGIGISDVATA--------------DSGKKKILLLKGKERDISHVADGMLQLQSATSSGN

Query:  SPSTATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSA
        + ST ++QNQ+ + GG LI+ ILL +++R  QSST VQS ++++   ++N KRP RP N+R+G                            K+ H  G+ 
Subjt:  SPSTATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILNSDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSA

Query:  SEKQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGS
        SEKQE+R RNKDRPDR +WAP  R D S    ++  +S + +          GE+KD +   R+G+V  +  G   ++ENGS RH +RR  G   K++  
Subjt:  SEKQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKDDIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGS

Query:  LNPNEGKSSKRGVGSG---HEKQVWVQKSST
        +   EGK+S+RG G G   HEKQ+W+QK S+
Subjt:  LNPNEGKSSKRGVGSG---HEKQVWVQKSST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGACCCGTTGGAGAGGGCGAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTCTCACAGTCAGATCTCTTCCACCATATTGATGATCGATTCGCTGGTCGCTACAA
TTGGTGTTACTATCGTCCCGGAAAGAGCAGTCAGAAGGACCAGAGGTACTCTCGAGCCTACATAGATTTTACGAGAACTGAAGATGTTTTTGAGTTTGCGGAGTTTTTTG
ATGGGCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCACAGCGTGTTCCCAGATTAACTACCAAAAAGGATGGTCGTGAGGGG
ACTATTTACAAAGATCCAGATTATTTGGAGTTTCTCAAACTCATTGCAAAACCTGCTGAGCATCTTCCAAGTGCTGAAATACAGTTGGAAAGAAAAGAAGCAGAACAATC
TGGTGTTGCAAAAGAAACTCCAATTGTTACACCTCTCATGGAATTTGTTCGCCAAAAACGAGCAGTTGAGAGTGGAACTCAGGGATCTTCAGTACCTCGGAAGGTAAAAA
GAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCAAATTCTATGAAGCGAGGGATGGAGAAGAAGAAGTATATTTTAAAGGACAGTGTGAAGAATACAAACCGCAGAGAC
AAGTCAAATTTTATTTTGATGCCCAGGCGAGAGGACCAGTCGGCCACTTCAAGTGGAATTGGAATTTCTGATGTTGCTACAGCTGACTCTGGAAAGAAGAAAATTCTGCT
TCTCAAGGGGAAAGAGCGAGATATATCTCATGTTGCTGATGGCATGTTACAACTGCAGAGTGCAACATCTTCGGGGAATTCTCCTTCTACTGCTACAAAACAGAATCAGA
GGCGTGAGGCTGGTGGAAGCTTGATCAGAAGCATCCTTTTAAATCATGAAGCACGTCATGGACAGAGTTCGACAGTAGTCCAGTCTCATAAAAAAATTCAAATCCTGAAC
TCAGACAATGGGAAGCGACCACCTCGTCCCATTAATTCTCGATCTGGGTCAAATGATATGTCCAATAATGAACCAAACCCATCTGGTGCGGAAGGGGATGGAAGAAGGGC
TCCAGAAAGTAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAAAAGCGAATAAGAAACAAAGATAGGCCTGATCGTGGGGTCTGGGCAC
CACGTAGTCGATCAGATGCCTCAGTCTCACAATTTGATGAATCCTCTGTTTCACAATCTAGTCATTTGCTTTCTGACTCAGTTGAAGCATACCGTGGGGAAATGAAAGAT
GATATTCATGGAAGCAGGACTGGGGATGTTACAACCACTGTGAGTGGTCGTAGCAGTTCAGTGGAGAATGGTTCTGTTAGACATGTTGCACGTCGTGGGGCTGGCCATGT
TATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGTCATCTAAAAGAGGTGTTGGCAGTGGCCATGAGAAACAAGTATGGGTTCAGAAGTCGTCTACAGATCGTG
ACGATGTCTATGCTGTCCAACAGATAATGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGGATTATCTCCATTCTGAGGATTTAATGCACATCCTCAGAAGG
CATCATCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTAATAGGTTTCGTGAACTGGATTGCAAGATTTGCAATTGTTTCGTCGTCGTATACAGATGCCT
GAGTAATGGCTTTGGACTCGTGGATTTGATTTTTGTAGCCGAACCTCTATTTGATATGGAGGTGGGTTTTCCCTTACCAGCTTTTCTTGAACATCAGGTGAGAGCGCGTG
ATCATCCAGCGTTTGAACGAAGAATCGTCGCCCGCTTCCGTAGTTTTCGGGGGACAGTGAAAGCTTCTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGACCCGTTGGAGAGGGCGAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTCTCACAGTCAGATCTCTTCCACCATATTGATGATCGATTCGCTGGTCGCTACAA
TTGGTGTTACTATCGTCCCGGAAAGAGCAGTCAGAAGGACCAGAGGTACTCTCGAGCCTACATAGATTTTACGAGAACTGAAGATGTTTTTGAGTTTGCGGAGTTTTTTG
ATGGGCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCACAGCGTGTTCCCAGATTAACTACCAAAAAGGATGGTCGTGAGGGG
ACTATTTACAAAGATCCAGATTATTTGGAGTTTCTCAAACTCATTGCAAAACCTGCTGAGCATCTTCCAAGTGCTGAAATACAGTTGGAAAGAAAAGAAGCAGAACAATC
TGGTGTTGCAAAAGAAACTCCAATTGTTACACCTCTCATGGAATTTGTTCGCCAAAAACGAGCAGTTGAGAGTGGAACTCAGGGATCTTCAGTACCTCGGAAGGTAAAAA
GAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCAAATTCTATGAAGCGAGGGATGGAGAAGAAGAAGTATATTTTAAAGGACAGTGTGAAGAATACAAACCGCAGAGAC
AAGTCAAATTTTATTTTGATGCCCAGGCGAGAGGACCAGTCGGCCACTTCAAGTGGAATTGGAATTTCTGATGTTGCTACAGCTGACTCTGGAAAGAAGAAAATTCTGCT
TCTCAAGGGGAAAGAGCGAGATATATCTCATGTTGCTGATGGCATGTTACAACTGCAGAGTGCAACATCTTCGGGGAATTCTCCTTCTACTGCTACAAAACAGAATCAGA
GGCGTGAGGCTGGTGGAAGCTTGATCAGAAGCATCCTTTTAAATCATGAAGCACGTCATGGACAGAGTTCGACAGTAGTCCAGTCTCATAAAAAAATTCAAATCCTGAAC
TCAGACAATGGGAAGCGACCACCTCGTCCCATTAATTCTCGATCTGGGTCAAATGATATGTCCAATAATGAACCAAACCCATCTGGTGCGGAAGGGGATGGAAGAAGGGC
TCCAGAAAGTAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAAAAGCGAATAAGAAACAAAGATAGGCCTGATCGTGGGGTCTGGGCAC
CACGTAGTCGATCAGATGCCTCAGTCTCACAATTTGATGAATCCTCTGTTTCACAATCTAGTCATTTGCTTTCTGACTCAGTTGAAGCATACCGTGGGGAAATGAAAGAT
GATATTCATGGAAGCAGGACTGGGGATGTTACAACCACTGTGAGTGGTCGTAGCAGTTCAGTGGAGAATGGTTCTGTTAGACATGTTGCACGTCGTGGGGCTGGCCATGT
TATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGTCATCTAAAAGAGGTGTTGGCAGTGGCCATGAGAAACAAGTATGGGTTCAGAAGTCGTCTACAGATCGTG
ACGATGTCTATGCTGTCCAACAGATAATGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGGATTATCTCCATTCTGAGGATTTAATGCACATCCTCAGAAGG
CATCATCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTAATAGGTTTCGTGAACTGGATTGCAAGATTTGCAATTGTTTCGTCGTCGTATACAGATGCCT
GAGTAATGGCTTTGGACTCGTGGATTTGATTTTTGTAGCCGAACCTCTATTTGATATGGAGGTGGGTTTTCCCTTACCAGCTTTTCTTGAACATCAGGTGAGAGCGCGTG
ATCATCCAGCGTTTGAACGAAGAATCGTCGCCCGCTTCCGTAGTTTTCGGGGGACAGTGAAAGCTTCTCCATGA
Protein sequenceShow/hide protein sequence
MKDPLERAKVVIRHLPPSLSQSDLFHHIDDRFAGRYNWCYYRPGKSSQKDQRYSRAYIDFTRTEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRLTTKKDGREG
TIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGVAKETPIVTPLMEFVRQKRAVESGTQGSSVPRKVKRGGAASSRKPESNSMKRGMEKKKYILKDSVKNTNRRD
KSNFILMPRREDQSATSSGIGISDVATADSGKKKILLLKGKERDISHVADGMLQLQSATSSGNSPSTATKQNQRREAGGSLIRSILLNHEARHGQSSTVVQSHKKIQILN
SDNGKRPPRPINSRSGSNDMSNNEPNPSGAEGDGRRAPESKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQFDESSVSQSSHLLSDSVEAYRGEMKD
DIHGSRTGDVTTTVSGRSSSVENGSVRHVARRGAGHVMKDDGSLNPNEGKSSKRGVGSGHEKQVWVQKSSTDRDDVYAVQQIMASRQDYGSSNFQGDYLHSEDLMHILRR
HHHVKWRYALEAVGNSNRFRELDCKICNCFVVVYRCLSNGFGLVDLIFVAEPLFDMEVGFPLPAFLEHQVRARDHPAFERRIVARFRSFRGTVKASP