; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr012602 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr012602
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionNUC173 domain-containing protein
Genome locationtig00153450:149870..161634
RNA-Seq ExpressionSgr012602
SyntenySgr012602
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596963.1 RRP12-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.2e-7681.05Show/hide
Query:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ
        ++ AYDVLHCIS +LKDLS+TN D  KKFV MILGYLS ASP++KSGAISA+SVLVYEDADICLSIPDLVPSLLSLL+GKAIEVIKAVLGF KVLVSSLQ
Subjt:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ

Query:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG
        AK LQSI+ DI++AALPWSSVSRHHFRSKVTVILEIL+RKCGYAAIEGV+P+KYKGF+K+L+EKRHNKTS K+ +DA+TD  VADS +NG
Subjt:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG

XP_004136785.1 RRP12-like protein [Cucumis sativus]7.1e-7782.63Show/hide
Query:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ
        ++ AYD+LHCISCSLKDLS TN DA KKFV MI+GYLS ASP++KSGAISA+SVL+YEDADICLSIPDLVPS+LSLLRGKAIEVIKAVLGF KVLVSSLQ
Subjt:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ

Query:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG
        AKHLQSII DI+ AALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEG TPE YKGF+K   EKR NKTS K+V DA+TD  VAD STNG
Subjt:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG

XP_022156829.1 RRP12-like protein [Momordica charantia]2.6e-7983.6Show/hide
Query:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ
        ++ AYDVLHCISCSLKDLS TN DA +KFVTM+LGYLS ASP++KSGAISALSVLVYEDADIC+SIPDLVPSLLSLLRGKAIEVIKAVLGF KVLVSS Q
Subjt:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ

Query:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTN
        AKHLQSII DI+VA LPWSSVSRHHFRSKVT+ILEILIRKCGYAA EGVTPEKYK F++ LWEKRH+KTS K+  D DTD TVADSS+N
Subjt:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTN

XP_022938515.1 RRP12-like protein [Cucurbita moschata]7.1e-7781.58Show/hide
Query:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ
        ++ AYDVLHCIS +LKDLS+TN D  KKFV MILGYLS ASP++KSGAISALSVLVYEDADICLSIPDLVPSLLSLL+GKAIEVIKAVLGF KVLVSSLQ
Subjt:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ

Query:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG
        AK LQSI+ DI++AALPWSSVSRHHFRSKVTVILEIL+RKCGYAAIEGV+P+KYKGF+K+L+EKRHNKTS K+ +DA+TD  VADS +NG
Subjt:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG

XP_038905709.1 RRP12-like protein [Benincasa hispida]4.1e-7783.68Show/hide
Query:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ
        ++ AYD+LHCISCSLKDLS TN DA KKFV MILGYLS ASP++KSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGF KVLVSSLQ
Subjt:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ

Query:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG
        AK LQSII DI+ A LPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGV+PEKYK F+K L EKRHNKT+ K+  DA+ D  VADSSTNG
Subjt:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG

TrEMBL top hitse value%identityAlignment
A0A0A0LHL3 NUC173 domain-containing protein3.4e-7782.63Show/hide
Query:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ
        ++ AYD+LHCISCSLKDLS TN DA KKFV MI+GYLS ASP++KSGAISA+SVL+YEDADICLSIPDLVPS+LSLLRGKAIEVIKAVLGF KVLVSSLQ
Subjt:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ

Query:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG
        AKHLQSII DI+ AALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEG TPE YKGF+K   EKR NKTS K+V DA+TD  VAD STNG
Subjt:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG

A0A5A7UJH3 RRP12-like protein1.3e-7683.07Show/hide
Query:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ
        ++ AYD+LHCISCSLKDLS TN DA +KFV MILGYLS ASP++KSGAISALSVLVY+DADICLSIPDLVPSLLSLLRGKAIEVIKA LGF KVLVSSLQ
Subjt:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ

Query:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTN
        AKHLQSI  DI+ AALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEG TP+ YKGF+K L EKRHNKTS K+V DA+TD  VAD STN
Subjt:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTN

A0A6J1DUR8 RRP12-like protein1.3e-7983.6Show/hide
Query:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ
        ++ AYDVLHCISCSLKDLS TN DA +KFVTM+LGYLS ASP++KSGAISALSVLVYEDADIC+SIPDLVPSLLSLLRGKAIEVIKAVLGF KVLVSS Q
Subjt:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ

Query:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTN
        AKHLQSII DI+VA LPWSSVSRHHFRSKVT+ILEILIRKCGYAA EGVTPEKYK F++ LWEKRH+KTS K+  D DTD TVADSS+N
Subjt:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTN

A0A6J1FK07 RRP12-like protein3.4e-7781.58Show/hide
Query:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ
        ++ AYDVLHCIS +LKDLS+TN D  KKFV MILGYLS ASP++KSGAISALSVLVYEDADICLSIPDLVPSLLSLL+GKAIEVIKAVLGF KVLVSSLQ
Subjt:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ

Query:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG
        AK LQSI+ DI++AALPWSSVSRHHFRSKVTVILEIL+RKCGYAAIEGV+P+KYKGF+K+L+EKRHNKTS K+ +DA+TD  VADS +NG
Subjt:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG

A0A6J1IB23 RRP12-like protein1.3e-7680.53Show/hide
Query:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ
        ++ AYDVLHCIS +LKDLS+TN D  KKFV MILGYLS ASP++KSGAISALSVLVYEDADICLSIPDLVPS+LSLL+GKAIEVIKAVLGF KVLVSS+Q
Subjt:  QERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQ

Query:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG
        AK LQSI+ DI++AALPWSSVSRHHFRSKVTVILEIL+RKCGYAAIEGV+P+KYKGF+K+L+EKRHNKTS K+ +DA+TD  VADS +NG
Subjt:  AKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG

SwissProt top hitse value%identityAlignment
Q12754 Ribosomal RNA-processing protein 124.2e-0825.12Show/hide
Query:  RQQERAYDVLHCISCSLKD-------LSVTNFD--------ARKKFVTMILGYLSSASPYIKSGAISALSVLVYE-----DADICLSIPDLVPSLLSLLR
        + +E A+D L C+   + +         +  +D        +  +F  +I   L   S ++ S +I+  + LV+E     D+ I + I D +   L+   
Subjt:  RQQERAYDVLHCISCSLKD-------LSVTNFD--------ARKKFVTMILGYLSSASPYIKSGAISALSVLVYE-----DADICLSIPDLVPSLLSLLR

Query:  GKAIEVIKAVLGFAKVLVSSLQAKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRH-NKTSPKNVDDA
          + E++K+ +GF KV V  L  + ++  + ++++  L WS     HF++KV  I+E LIR+ GY  IE   PE+ +  +  + + R+ NK   + V   
Subjt:  GKAIEVIKAVLGFAKVLVSSLQAKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRH-NKTSPKNVDDA

Query:  DTD
         +D
Subjt:  DTD

Q5JTH9 RRP12-like protein7.5e-0526.57Show/hide
Query:  SGAISALSVLVYEDADI--CLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQAKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGY
        S +I AL+ L++E   +    ++  L+ ++  LL  +  +V+K+ LGF KV V+ +   HL   +  ++ A    S   R HFR K+  +    IRK G+
Subjt:  SGAISALSVLVYEDADI--CLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQAKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGY

Query:  AAIEGVTPEKYKGFVKALWE-----KRHNKTSPKNVDDADTDD
          ++ + PE+Y   +  + +     KRH   S   V++ + ++
Subjt:  AAIEGVTPEKYKGFVKALWE-----KRHNKTSPKNVDDADTDD

Q5ZKD5 RRP12-like protein1.3e-0429.93Show/hide
Query:  DARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDAD-ICLSIPD-LVPSLLSLLRGKAIEVIKAVLGFAKVLV----SSLQAKHLQSIIYDIVVAALP
        +A ++F+ ++   L+ +   I S  + AL+ L +E  D + L++ + L+ ++  LL  +  +V+KA LGF KV++    ++L AKH+Q+++    V +L 
Subjt:  DARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDAD-ICLSIPD-LVPSLLSLLRGKAIEVIKAVLGFAKVLV----SSLQAKHLQSIIYDIVVAALP

Query:  WSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKY
         S   R HFR K+  +    IRK G+  ++G+ P ++
Subjt:  WSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKY

Arabidopsis top hitse value%identityAlignment
AT2G34357.1 ARM repeat superfamily protein8.8e-1734.18Show/hide
Query:  RQQERAYDVLHCISCSLKDLSVTNFDARK--KFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLV
        + + RAYDVL  I  +  D      D  K   +  M++G L+   P + S A+  ++ L YE +D+  S  +L+PS   LL+ K  E+ KA LG  KVLV
Subjt:  RQQERAYDVLHCISCSLKDLSVTNFDARK--KFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLV

Query:  SSLQAKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKY
        +    + L + +  +V   L W   +++ F++KV ++LE+LI+KCG  A++ V PE++
Subjt:  SSLQAKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKY

AT4G23540.1 ARM repeat superfamily protein4.9e-4450.56Show/hide
Query:  GRQQER--AYDVLHCISCSLKD-LSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKV
        G+++ R  A D L  +  +LK+  S+T+ +   K + MI GY+S  SP+I+SGA+SALS LVY+D +ICLS P+L+ S+LSLL  K+IE+IKAVLGF KV
Subjt:  GRQQER--AYDVLHCISCSLKD-LSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKV

Query:  LVSSLQAKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPK
        LVS+ QA+ L S++ +++   LPWSSVSRH+F+SKVT+I+EI++RKCG  A++  TP+K+K F++ + E R  K+  K
Subjt:  LVSSLQAKHLQSIIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAGAGGAAGGCAGCAGGAAAGAGCTTATGACGTACTTCATTGTATCAGTTGCAGCCTAAAAGATTTGTCAGTTACAAATTTTGATGCACGTAAAAAATTTGTGACCATG
ATATTGGGCTATTTGTCTAGTGCATCTCCTTACATAAAGAGTGGAGCAATCTCTGCACTCTCAGTGCTGGTCTATGAGGATGCAGATATATGTCTTTCAATCCCTGATCT
TGTGCCCTCTCTCTTATCTTTATTACGAGGAAAGGCTATAGAAGTTATAAAAGCAGTGCTAGGGTTTGCGAAAGTTCTAGTGTCTTCCTTGCAAGCTAAACATCTTCAGA
GCATCATTTATGATATTGTTGTAGCGGCTTTACCTTGGTCGTCTGTCTCAAGGCATCATTTTAGATCGAAGGTCACAGTAATTCTGGAGATTCTCATACGAAAATGTGGC
TATGCTGCAATTGAGGGTGTTACTCCTGAAAAATACAAGGGTTTCGTCAAGGCTCTTTGGGAGAAACGTCATAACAAGACCAGTCCCAAGAATGTTGATGATGCTGATAC
AGATGATACAGTTGCAGATTCATCCACTAATGG
mRNA sequenceShow/hide mRNA sequence
GCAGAGGAAGGCAGCAGGAAAGAGCTTATGACGTACTTCATTGTATCAGTTGCAGCCTAAAAGATTTGTCAGTTACAAATTTTGATGCACGTAAAAAATTTGTGACCATG
ATATTGGGCTATTTGTCTAGTGCATCTCCTTACATAAAGAGTGGAGCAATCTCTGCACTCTCAGTGCTGGTCTATGAGGATGCAGATATATGTCTTTCAATCCCTGATCT
TGTGCCCTCTCTCTTATCTTTATTACGAGGAAAGGCTATAGAAGTTATAAAAGCAGTGCTAGGGTTTGCGAAAGTTCTAGTGTCTTCCTTGCAAGCTAAACATCTTCAGA
GCATCATTTATGATATTGTTGTAGCGGCTTTACCTTGGTCGTCTGTCTCAAGGCATCATTTTAGATCGAAGGTCACAGTAATTCTGGAGATTCTCATACGAAAATGTGGC
TATGCTGCAATTGAGGGTGTTACTCCTGAAAAATACAAGGGTTTCGTCAAGGCTCTTTGGGAGAAACGTCATAACAAGACCAGTCCCAAGAATGTTGATGATGCTGATAC
AGATGATACAGTTGCAGATTCATCCACTAATGG
Protein sequenceShow/hide protein sequence
RGRQQERAYDVLHCISCSLKDLSVTNFDARKKFVTMILGYLSSASPYIKSGAISALSVLVYEDADICLSIPDLVPSLLSLLRGKAIEVIKAVLGFAKVLVSSLQAKHLQS
IIYDIVVAALPWSSVSRHHFRSKVTVILEILIRKCGYAAIEGVTPEKYKGFVKALWEKRHNKTSPKNVDDADTDDTVADSSTNG