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Sgr012866 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr012866
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionhistone H2B-like
Genome locationtig00153577:113031..113344
RNA-Seq ExpressionSgr012866
SyntenySgr012866
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586013.1 Histone H2B.4, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0791.43Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGK
        +GISGQAMVILNNLM+DMFERLAEEAT+LSKYTGK
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGK

XP_022937553.1 histone H2B.1-like isoform X2 [Cucurbita moschata]6.0e-1469.44Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAVVKGNTGGGAAGAAGRAGEARHCRGN
        +GISGQAMVILNNLM+DMFERLAEEAT+LSKYT           DAV+KG+TGGG AG  GRA EAR CRG+
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAVVKGNTGGGAAGAAGRAGEARHCRGN

XP_022969528.1 histone H2B, gonadal-like isoform X1 [Cucurbita maxima]7.1e-0772.34Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV
        +GISGQAMVILNNLM+DMFERLAEEAT+LSKYTG   ++  E   AV
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV

XP_022969529.1 histone H2B.4-like isoform X2 [Cucurbita maxima]3.9e-1369.57Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAVVKGNTGGGAAGAAGRAGEARHC
        +GISGQAMVILNNLM+DMFERLAEEAT+LSKYT           DAV+KGNTGGG  G  GRA EAR C
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAVVKGNTGGGAAGAAGRAGEARHC

XP_023537504.1 histone H2B-like [Cucurbita pepo subsp. pepo]7.1e-0772.34Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV
        +GISGQAMVILNNLM+DMFERLAEEAT+LSKYTG   ++  E   AV
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV

TrEMBL top hitse value%identityAlignment
A0A6J1DJ82 histone H2B-like3.8e-0659.09Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDA---VVKGNTGGGAAGAAGRA
        MGISGQAMVIL+NLM+DMFERL EEATRLSKYTG+  ++  E   A   VV G  G  A     +A
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDA---VVKGNTGGGAAGAAGRA

A0A6J1FBI7 histone H2B.6-like isoform X13.4e-0772.34Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV
        +GISGQAMVILNNLM+DMFERLAEEAT+LSKYTG   ++  E   AV
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV

A0A6J1FGB7 histone H2B.1-like isoform X22.9e-1469.44Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAVVKGNTGGGAAGAAGRAGEARHCRGN
        +GISGQAMVILNNLM+DMFERLAEEAT+LSKYT           DAV+KG+TGGG AG  GRA EAR CRG+
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAVVKGNTGGGAAGAAGRAGEARHCRGN

A0A6J1I190 histone H2B, gonadal-like isoform X13.4e-0772.34Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV
        +GISGQAMVILNNLM+DMFERLAEEAT+LSKYTG   ++  E   AV
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV

A0A6J1I2V8 histone H2B.4-like isoform X21.9e-1369.57Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAVVKGNTGGGAAGAAGRAGEARHC
        +GISGQAMVILNNLM+DMFERLAEEAT+LSKYT           DAV+KGNTGGG  G  GRA EAR C
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAVVKGNTGGGAAGAAGRAGEARHC

SwissProt top hitse value%identityAlignment
Q9SGE3 Histone H2B.29.9e-0446.81Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV
        +GI+ +AM ++N  M DMFER+A+EA RLS YT +  ++  E   AV
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV

Arabidopsis top hitse value%identityAlignment
AT1G08170.1 Histone superfamily protein7.1e-0546.81Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV
        +GI+ +AM ++N  M DMFER+A+EA RLS YT +  ++  E   AV
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV

AT2G28720.1 Histone superfamily protein4.6e-0442.55Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV
        +GIS +AM I+N+ ++D+FE+LA+EA++L++Y  K  +   E   AV
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV

AT2G37470.1 Histone superfamily protein2.1e-0442.55Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV
        +GISG+AM I+N+ ++D+FE+LA+E+++L++Y  K  +   E   AV
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV

AT3G53650.1 Histone superfamily protein9.2e-0544.68Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV
        +GISG+AM I+N+ ++D+FE+LA+E++RL++Y  K  +   E   AV
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV

AT5G02570.1 Histone superfamily protein9.2e-0544.68Show/hide
Query:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV
        +GISG+AM I+N+ ++D+FE+LA+E++RL++Y  K  +   E   AV
Subjt:  MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATATCGGGGCAGGCGATGGTGATTCTGAACAATCTGATGAGCGACATGTTCGAGAGGCTGGCGGAGGAGGCGACAAGGCTCTCCAAATATACAGGCAAGTACGA
GGTTGCAGTTGCAGAGGGGAATGACGCTGTCGTCAAGGGAAATACAGGGGGCGGTGCGGCTGGTGCTGCCGGGAGAGCTGGGGAAGCACGCCATTGCAGAGGGAACCAAA
GCTGTGTCTACGTACGTGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATATCGGGGCAGGCGATGGTGATTCTGAACAATCTGATGAGCGACATGTTCGAGAGGCTGGCGGAGGAGGCGACAAGGCTCTCCAAATATACAGGCAAGTACGA
GGTTGCAGTTGCAGAGGGGAATGACGCTGTCGTCAAGGGAAATACAGGGGGCGGTGCGGCTGGTGCTGCCGGGAGAGCTGGGGAAGCACGCCATTGCAGAGGGAACCAAA
GCTGTGTCTACGTACGTGGCTAA
Protein sequenceShow/hide protein sequence
MGISGQAMVILNNLMSDMFERLAEEATRLSKYTGKYEVAVAEGNDAVVKGNTGGGAAGAAGRAGEARHCRGNQSCVYVRG