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Sgr012867 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr012867
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionhistone H2B-like
Genome locationtig00153577:113502..113873
RNA-Seq ExpressionSgr012867
SyntenySgr012867
Gene Ontology termsGO:0005694 - chromosome (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052101.1 histone H2B type 1-A-like [Cucumis melo var. makuwa]1.4e-1757.76Show/hide
Query:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---
        MPPRRSRR+VGSV+RTTT+VV+ETV+VA+V+KESQ LTQEP+TAE +  GGE FRR +PVEE+     P+QP T P SE+ E  ++ TDSTSQ+TED   
Subjt:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---

Query:  --KTEPEAKNVKLMNK
          + EPE    K++ +
Subjt:  --KTEPEAKNVKLMNK

TYJ98095.1 histone H2B type 1-A-like [Cucumis melo var. makuwa]1.8e-1761.68Show/hide
Query:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---
        MPPRRSRR+VGSV+RTTT+VV+ETV+VA+V+KESQ LTQEP+TAE +  GGE FRR +PVEE+     P+QP T P SE+ E  ++ TDSTSQ+TED   
Subjt:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---

Query:  --KTEPE
          + EPE
Subjt:  --KTEPE

XP_008462313.1 PREDICTED: histone H2B type 1-A-like [Cucumis melo]6.2e-1858.12Show/hide
Query:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---
        MPPRRSRR+VGSV+RTTT+VV+ETV+VA+V+KESQ LTQEP+TAE +  GGE FRR +PVEE+     P+QP T P SE+ E  ++ TDSTSQ+TED   
Subjt:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---

Query:  --KTEPEAKNVKLMNKR
          + EPE +  K   +R
Subjt:  --KTEPEAKNVKLMNKR

XP_031736247.1 histone H2B [Cucumis sativus]7.3e-1958.26Show/hide
Query:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAE-ESSGGEEFRRTIPVEEMAPAPKQPQTLPQSEDSEPNKKPTDSTSQITED-----
        MPPRRSRR+VGSV+RTTT+VV+ETV+VA+V+KESQ LTQEP+ AE    GGE FRRT+PVEE+   P+QP + P SED E  ++ TDSTSQ+TED     
Subjt:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAE-ESSGGEEFRRTIPVEEMAPAPKQPQTLPQSEDSEPNKKPTDSTSQITED-----

Query:  KTEPEAKNVKLMNKR
        + EP+ +  K   +R
Subjt:  KTEPEAKNVKLMNKR

XP_038894659.1 LOW QUALITY PROTEIN: histone H2B-like [Benincasa hispida]2.9e-2362.07Show/hide
Query:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAE--ESSGGEEFRRTIPVEEMAPAPKQPQTLPQSEDSEPNKKPTDSTSQITED----
        MPPRRSRR+VGSV+RTTT++V+ETV+VA+++KESQ LTQEPET +  E  GG+ FRRTIPVEE AP  +QP+T P SED +  +KPTDSTSQ+TED    
Subjt:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAE--ESSGGEEFRRTIPVEEMAPAPKQPQTLPQSEDSEPNKKPTDSTSQITED----

Query:  -KTEPEAKNVKLMNKR
         + EPE +N K   KR
Subjt:  -KTEPEAKNVKLMNKR

TrEMBL top hitse value%identityAlignment
A0A0A0LSH9 Histone domain-containing protein3.5e-1958.26Show/hide
Query:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAE-ESSGGEEFRRTIPVEEMAPAPKQPQTLPQSEDSEPNKKPTDSTSQITED-----
        MPPRRSRR+VGSV+RTTT+VV+ETV+VA+V+KESQ LTQEP+ AE    GGE FRRT+PVEE+   P+QP + P SED E  ++ TDSTSQ+TED     
Subjt:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAE-ESSGGEEFRRTIPVEEMAPAPKQPQTLPQSEDSEPNKKPTDSTSQITED-----

Query:  KTEPEAKNVKLMNKR
        + EP+ +  K   +R
Subjt:  KTEPEAKNVKLMNKR

A0A1S3CH74 histone H2B type 1-A-like3.0e-1858.12Show/hide
Query:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---
        MPPRRSRR+VGSV+RTTT+VV+ETV+VA+V+KESQ LTQEP+TAE +  GGE FRR +PVEE+     P+QP T P SE+ E  ++ TDSTSQ+TED   
Subjt:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---

Query:  --KTEPEAKNVKLMNKR
          + EPE +  K   +R
Subjt:  --KTEPEAKNVKLMNKR

A0A5A7UF12 Histone H2B type 1-A-like6.6e-1857.76Show/hide
Query:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---
        MPPRRSRR+VGSV+RTTT+VV+ETV+VA+V+KESQ LTQEP+TAE +  GGE FRR +PVEE+     P+QP T P SE+ E  ++ TDSTSQ+TED   
Subjt:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---

Query:  --KTEPEAKNVKLMNK
          + EPE    K++ +
Subjt:  --KTEPEAKNVKLMNK

A0A5D3BHX3 Histone H2B type 1-A-like8.7e-1861.68Show/hide
Query:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---
        MPPRRSRR+VGSV+RTTT+VV+ETV+VA+V+KESQ LTQEP+TAE +  GGE FRR +PVEE+     P+QP T P SE+ E  ++ TDSTSQ+TED   
Subjt:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEES-SGGEEFRRTIPVEEM--APAPKQPQTLPQSEDSEPNKKPTDSTSQITED---

Query:  --KTEPE
          + EPE
Subjt:  --KTEPE

A0A6J1FGB7 histone H2B.1-like isoform X24.5e-1462.11Show/hide
Query:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEESSGGEEFRRTIPVEEMAPAPKQPQTLPQSEDSEPNKKPTDSTSQITEDK
        MPPRRSRRIVGSV+RTTTKVV+ETV VA+V+ ESQ +TQEP TA E+ G   FRRTIPVE+       PQT P   D +   +P DSTS++TEDK
Subjt:  MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEESSGGEEFRRTIPVEEMAPAPKQPQTLPQSEDSEPNKKPTDSTSQITEDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCAAGGCGATCCCGGAGAATCGTCGGTTCCGTCATCCGGACGACGACGAAGGTGGTGCAAGAAACAGTGGAAGTCGCAATCGTGAAGAAAGAGAGCCAGCGTCT
AACGCAAGAGCCAGAAACGGCGGAGGAAAGCTCCGGCGGCGAAGAATTCAGGCGAACCATTCCGGTGGAAGAGATGGCTCCGGCCCCAAAACAACCCCAAACTCTGCCAC
AGTCGGAAGATTCAGAGCCGAACAAGAAGCCTACGGATTCCACCTCACAGATCACAGAAGACAAGACAGAACCCGAGGCCAAAAATGTTAAGCTTATGAATAAAAGATTA
AATTTACAGTATTTCCATCAGTTTAAGCTTCTGGGTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCAAGGCGATCCCGGAGAATCGTCGGTTCCGTCATCCGGACGACGACGAAGGTGGTGCAAGAAACAGTGGAAGTCGCAATCGTGAAGAAAGAGAGCCAGCGTCT
AACGCAAGAGCCAGAAACGGCGGAGGAAAGCTCCGGCGGCGAAGAATTCAGGCGAACCATTCCGGTGGAAGAGATGGCTCCGGCCCCAAAACAACCCCAAACTCTGCCAC
AGTCGGAAGATTCAGAGCCGAACAAGAAGCCTACGGATTCCACCTCACAGATCACAGAAGACAAGACAGAACCCGAGGCCAAAAATGTTAAGCTTATGAATAAAAGATTA
AATTTACAGTATTTCCATCAGTTTAAGCTTCTGGGTATTTAA
Protein sequenceShow/hide protein sequence
MPPRRSRRIVGSVIRTTTKVVQETVEVAIVKKESQRLTQEPETAEESSGGEEFRRTIPVEEMAPAPKQPQTLPQSEDSEPNKKPTDSTSQITEDKTEPEAKNVKLMNKRL
NLQYFHQFKLLGI