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Sgr012872 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr012872
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionZinc finger (C3HC4-type RING finger) family protein
Genome locationtig00153578:100003..100716
RNA-Seq ExpressionSgr012872
SyntenySgr012872
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ17931.1 zinc finger (C3HC4-type RING finger) family protein [Actinidia rufa]4.6e-0555.93Show/hide
Query:  MVELAEGCCHITCRIP----------FVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRS
        MVELA GC HI C  P          F DV MSFA  AE  GR RKLHVPV FG S  S
Subjt:  MVELAEGCCHITCRIP----------FVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRS

KAG6415094.1 hypothetical protein SASPL_122496 [Salvia splendens]1.3e-0455.56Show/hide
Query:  MVELAEGCCHITCRI-----PFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRS
        MV L+ GC HI CRI      +  V MSFAIH E  G TRKLHV V  GTS  S
Subjt:  MVELAEGCCHITCRI-----PFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRS

KAG8371368.1 hypothetical protein BUALT_Bualt13G0080400 [Buddleja alternifolia]8.6e-0445.61Show/hide
Query:  MVELAEGCCHITC----RIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSYVIL
        MV LA GC HI C     + F D   SFAIH +  G+TRK H  V FG  + SY+++
Subjt:  MVELAEGCCHITC----RIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSYVIL

XP_021812164.1 probable E3 ubiquitin-protein ligase rbrA [Prunus avium]7.0e-0660Show/hide
Query:  MVELAEGCCHITCRIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSY
        MVEL  GC HITC + FV VD+SFAI AE  GRTR+ HVP   G S+  Y
Subjt:  MVELAEGCCHITCRIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSY

XP_021812165.1 probable E3 ubiquitin-protein ligase rbrA [Prunus avium]1.9e-0660Show/hide
Query:  MVELAEGCCHITCRIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSY
        MVEL  GC HITC + FV VD+SFAI AE  GRTR+ HVP  +G S+  Y
Subjt:  MVELAEGCCHITCRIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSY

TrEMBL top hitse value%identityAlignment
A0A4D8ZLU1 Uncharacterized protein6.4e-0555.56Show/hide
Query:  MVELAEGCCHITCRI-----PFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRS
        MV L+ GC HI CRI      +  V MSFAIH E  G TRKLHV V  GTS  S
Subjt:  MVELAEGCCHITCRI-----PFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRS

A0A6P5S583 probable E3 ubiquitin-protein ligase rbrA9.0e-0760Show/hide
Query:  MVELAEGCCHITCRIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSY
        MVEL  GC HITC + FV VD+SFAI AE  GRTR+ HVP  +G S+  Y
Subjt:  MVELAEGCCHITCRIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSY

A0A6P5S8P4 probable E3 ubiquitin-protein ligase rbrA3.4e-0660Show/hide
Query:  MVELAEGCCHITCRIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSY
        MVEL  GC HITC + FV VD+SFAI AE  GRTR+ HVP   G S+  Y
Subjt:  MVELAEGCCHITCRIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSY

A0A7J0H4H7 Zinc finger (C3HC4-type RING finger) family protein2.2e-0555.93Show/hide
Query:  MVELAEGCCHITCRIP----------FVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRS
        MVELA GC HI C  P          F DV MSFA  AE  GR RKLHVPV FG S  S
Subjt:  MVELAEGCCHITCRIP----------FVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAACTATGGCGCCAATGTGTTAAGTGACATTATGGTTGAATTGGCTGAAGGCTGCTGCCACATCACCTGCAGGATCCCATTTGTAGATGTGGATATGAGTTTTGCTATA
CATGCAGAGCCCCGTGGAAGAACAAGAAAGCTACATGTTCCTGTCCAATTTGGGACGAGTGTAAGATCATACGTGATACTCGTCGATGTCAAAGATGAGCTCTTGAGCTA
A
mRNA sequenceShow/hide mRNA sequence
GAAACTATGGCGCCAATGTGTTAAGTGACATTATGGTTGAATTGGCTGAAGGCTGCTGCCACATCACCTGCAGGATCCCATTTGTAGATGTGGATATGAGTTTTGCTATA
CATGCAGAGCCCCGTGGAAGAACAAGAAAGCTACATGTTCCTGTCCAATTTGGGACGAGTGTAAGATCATACGTGATACTCGTCGATGTCAAAGATGAGCTCTTGAGCTA
A
Protein sequenceShow/hide protein sequence
NYGANVLSDIMVELAEGCCHITCRIPFVDVDMSFAIHAEPRGRTRKLHVPVQFGTSVRSYVILVDVKDELLS