; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr013446 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr013446
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionSWI/SNF complex subunit SWI3D
Genome locationtig00153870:132540..133079
RNA-Seq ExpressionSgr013446
SyntenySgr013446
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572029.1 SWI/SNF complex subunit SWI3D, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5981.88Show/hide
Query:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK
        ME+KRRDAGNLP NSTDSPSSEP SSRRRAGAQKRKAS +GGS SSSAPSKRVTR+KSALSHPPNH GPFTRAR GP+NVAG   AN  GGLA+A+GSVK
Subjt:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK

Query:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
         E S+LHSE  RG+A+VAAAEELNK +RLANLEASFEADFEAIKSR AN+HVVPNHCG F
Subjt:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

XP_022135773.1 SWI/SNF complex subunit SWI3D [Momordica charantia]5.0e-6184.47Show/hide
Query:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGL-AAASGSV
        MEEKRRDA NLPVNSTDSPS EP SSRRRAGAQKRKASA+G SN+SSAPSKRVTRDKSALSHP NH GPFTRARLGP+NVAGT   N AGGL AAA+GSV
Subjt:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGL-AAASGSV

Query:  KAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
        K E S+LHSE  RGEA+VAAAEELNKVSRLANLEASFEADFEAIKSRGA+ H VPNHCG F
Subjt:  KAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

XP_022931284.1 SWI/SNF complex subunit SWI3D-like [Cucurbita moschata]5.5e-6083.12Show/hide
Query:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK
        MEEKRRDAGNLP N+TDSPSSEP SSRRRAGAQKRK SA+GGSNSSSAPSKRVTRDK ALSHPPNH GPFTRARLGP+N AGT   N AGGL+AA GSVK
Subjt:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK

Query:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
         E S LHSEA RG+ +VAAAEELNK SRLANLEASF ADFE+IKSRG NAHVVPNHCG F
Subjt:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

XP_022952326.1 SWI/SNF complex subunit SWI3D-like isoform X1 [Cucurbita moschata]1.6e-5981.88Show/hide
Query:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK
        ME+KRRDAGNLP NSTDSPSSEP SSRRRAGAQKRKAS +GGS SSSAPSKRVTR+KSALSHPPNH GPFTRAR GP+NVAG   AN  GGLA+A+GSVK
Subjt:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK

Query:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
         E S+LHSE  RG+A+VAAAEELNK +RLANLEASFEADFEAIKSR AN+HVVPNHCG F
Subjt:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

XP_023529451.1 SWI/SNF complex subunit SWI3D-like [Cucurbita pepo subsp. pepo]5.5e-6083.12Show/hide
Query:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK
        MEEKRRDAGNLP N+TDSPSSEP SSRRRAGAQKRK SA+GGSNSSSAPSKRVTRDK ALSHPPNH GPFTRARLGP+N AGT   N AGGL+AA GSVK
Subjt:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK

Query:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
         E S LHSEA RG+ +VAAAEELNK SRLANLEASF ADFE+IKSRG NAHVVPNHCG F
Subjt:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

TrEMBL top hitse value%identityAlignment
A0A6J1C5U7 SWI/SNF complex subunit SWI3D2.4e-6184.47Show/hide
Query:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGL-AAASGSV
        MEEKRRDA NLPVNSTDSPS EP SSRRRAGAQKRKASA+G SN+SSAPSKRVTRDKSALSHP NH GPFTRARLGP+NVAGT   N AGGL AAA+GSV
Subjt:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGL-AAASGSV

Query:  KAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
        K E S+LHSE  RGEA+VAAAEELNKVSRLANLEASFEADFEAIKSRGA+ H VPNHCG F
Subjt:  KAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

A0A6J1ETV7 SWI/SNF complex subunit SWI3D-like2.7e-6083.12Show/hide
Query:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK
        MEEKRRDAGNLP N+TDSPSSEP SSRRRAGAQKRK SA+GGSNSSSAPSKRVTRDK ALSHPPNH GPFTRARLGP+N AGT   N AGGL+AA GSVK
Subjt:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK

Query:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
         E S LHSEA RG+ +VAAAEELNK SRLANLEASF ADFE+IKSRG NAHVVPNHCG F
Subjt:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

A0A6J1GJX9 SWI/SNF complex subunit SWI3D-like isoform X17.8e-6081.88Show/hide
Query:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK
        ME+KRRDAGNLP NSTDSPSSEP SSRRRAGAQKRKAS +GGS SSSAPSKRVTR+KSALSHPPNH GPFTRAR GP+NVAG   AN  GGLA+A+GSVK
Subjt:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK

Query:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
         E S+LHSE  RG+A+VAAAEELNK +RLANLEASFEADFEAIKSR AN+HVVPNHCG F
Subjt:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

A0A6J1GK40 SWI/SNF complex subunit SWI3D-like isoform X27.8e-6081.88Show/hide
Query:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK
        ME+KRRDAGNLP NSTDSPSSEP SSRRRAGAQKRKAS +GGS SSSAPSKRVTR+KSALSHPPNH GPFTRAR GP+NVAG   AN  GGLA+A+GSVK
Subjt:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK

Query:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
         E S+LHSE  RG+A+VAAAEELNK +RLANLEASFEADFEAIKSR AN+HVVPNHCG F
Subjt:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

A0A6J1IA51 SWI/SNF complex subunit SWI3D isoform X24.3e-5880.62Show/hide
Query:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK
        MEEKRRDA NLP NSTDSPSSEP SSRRRAGAQKRKAS +GGS SSSAPSKRVTR+KSAL+HPPNH GPFTRAR GP+NVAG   AN  GGLA+A+ SVK
Subjt:  MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVK

Query:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
         E S+LHSE  RG+A+VAAAEELNK +RLAN+EASFEADFEAIKSR ANAHVVPNHCG F
Subjt:  AEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

SwissProt top hitse value%identityAlignment
Q8VY05 SWI/SNF complex subunit SWI3D8.4e-1948.5Show/hide
Query:  MEEKRRD-AGNLPV--NSTDSPSSEP-ASSRRRAGAQKRKASAVGGSN-SSSAPSKR-VTRDKSAL-SHPPNHIGPFTRARLGPSNVAGTVVANGAGGLA
        MEEKRRD AG L    +S DSP+SEP  + RRR G  KRKA+A+GGSN  SSAPSKR +TR+K+ L S  P H GP TRAR  PS     ++ + A G+ 
Subjt:  MEEKRRD-AGNLPV--NSTDSPSSEP-ASSRRRAGAQKRKASAVGGSN-SSSAPSKR-VTRDKSAL-SHPPNHIGPFTRARLGPSNVAGTVVANGAGGLA

Query:  AASGSVKAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
        +   +V   A         GE      E    +     LEA  EADFEAI+SR +N HVVPNHCG F
Subjt:  AASGSVKAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

Arabidopsis top hitse value%identityAlignment
AT4G34430.1 DNA-binding family protein6.0e-2048.5Show/hide
Query:  MEEKRRD-AGNLPV--NSTDSPSSEP-ASSRRRAGAQKRKASAVGGSN-SSSAPSKR-VTRDKSAL-SHPPNHIGPFTRARLGPSNVAGTVVANGAGGLA
        MEEKRRD AG L    +S DSP+SEP  + RRR G  KRKA+A+GGSN  SSAPSKR +TR+K+ L S  P H GP TRAR  PS     ++ + A G+ 
Subjt:  MEEKRRD-AGNLPV--NSTDSPSSEP-ASSRRRAGAQKRKASAVGGSN-SSSAPSKR-VTRDKSAL-SHPPNHIGPFTRARLGPSNVAGTVVANGAGGLA

Query:  AASGSVKAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
        +   +V   A         GE      E    +     LEA  EADFEAI+SR +N HVVPNHCG F
Subjt:  AASGSVKAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

AT4G34430.2 DNA-binding family protein6.0e-2048.5Show/hide
Query:  MEEKRRD-AGNLPV--NSTDSPSSEP-ASSRRRAGAQKRKASAVGGSN-SSSAPSKR-VTRDKSAL-SHPPNHIGPFTRARLGPSNVAGTVVANGAGGLA
        MEEKRRD AG L    +S DSP+SEP  + RRR G  KRKA+A+GGSN  SSAPSKR +TR+K+ L S  P H GP TRAR  PS     ++ + A G+ 
Subjt:  MEEKRRD-AGNLPV--NSTDSPSSEP-ASSRRRAGAQKRKASAVGGSN-SSSAPSKR-VTRDKSAL-SHPPNHIGPFTRARLGPSNVAGTVVANGAGGLA

Query:  AASGSVKAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
        +   +V   A         GE      E    +     LEA  EADFEAI+SR +N HVVPNHCG F
Subjt:  AASGSVKAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

AT4G34430.3 DNA-binding family protein6.0e-2048.5Show/hide
Query:  MEEKRRD-AGNLPV--NSTDSPSSEP-ASSRRRAGAQKRKASAVGGSN-SSSAPSKR-VTRDKSAL-SHPPNHIGPFTRARLGPSNVAGTVVANGAGGLA
        MEEKRRD AG L    +S DSP+SEP  + RRR G  KRKA+A+GGSN  SSAPSKR +TR+K+ L S  P H GP TRAR  PS     ++ + A G+ 
Subjt:  MEEKRRD-AGNLPV--NSTDSPSSEP-ASSRRRAGAQKRKASAVGGSN-SSSAPSKR-VTRDKSAL-SHPPNHIGPFTRARLGPSNVAGTVVANGAGGLA

Query:  AASGSVKAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
        +   +V   A         GE      E    +     LEA  EADFEAI+SR +N HVVPNHCG F
Subjt:  AASGSVKAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF

AT4G34430.4 DNA-binding family protein6.0e-2048.5Show/hide
Query:  MEEKRRD-AGNLPV--NSTDSPSSEP-ASSRRRAGAQKRKASAVGGSN-SSSAPSKR-VTRDKSAL-SHPPNHIGPFTRARLGPSNVAGTVVANGAGGLA
        MEEKRRD AG L    +S DSP+SEP  + RRR G  KRKA+A+GGSN  SSAPSKR +TR+K+ L S  P H GP TRAR  PS     ++ + A G+ 
Subjt:  MEEKRRD-AGNLPV--NSTDSPSSEP-ASSRRRAGAQKRKASAVGGSN-SSSAPSKR-VTRDKSAL-SHPPNHIGPFTRARLGPSNVAGTVVANGAGGLA

Query:  AASGSVKAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF
        +   +V   A         GE      E    +     LEA  EADFEAI+SR +N HVVPNHCG F
Subjt:  AASGSVKAEASILHSEAHRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGAAGCGCCGGGACGCCGGGAATTTGCCTGTGAACAGCACCGATTCGCCCTCATCGGAGCCGGCTTCTTCGCGCCGTCGAGCTGGAGCTCAGAAGCGAAAGGC
CAGCGCTGTTGGTGGGTCTAACTCCTCATCCGCGCCGTCGAAGCGTGTTACTCGGGATAAATCTGCGCTTTCGCATCCTCCAAATCATATCGGCCCCTTCACCAGAGCTC
GACTGGGCCCGAGCAATGTTGCCGGAACAGTAGTGGCTAATGGGGCAGGAGGTCTGGCTGCCGCGTCCGGATCAGTTAAGGCGGAGGCCTCTATACTTCATTCAGAAGCT
CATCGTGGAGAGGCGGTGGTCGCCGCGGCTGAGGAATTGAACAAGGTGAGTAGATTGGCGAATTTGGAGGCATCATTCGAAGCTGATTTCGAAGCTATTAAATCTCGTGG
TGCGAATGCTCATGTCGTTCCCAATCATTGCGGTGAGTTTTGGTGTACTCCTTGCGAGATCCTGATTTATGCCAATTATGATAGGAATTCGTCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGAAGCGCCGGGACGCCGGGAATTTGCCTGTGAACAGCACCGATTCGCCCTCATCGGAGCCGGCTTCTTCGCGCCGTCGAGCTGGAGCTCAGAAGCGAAAGGC
CAGCGCTGTTGGTGGGTCTAACTCCTCATCCGCGCCGTCGAAGCGTGTTACTCGGGATAAATCTGCGCTTTCGCATCCTCCAAATCATATCGGCCCCTTCACCAGAGCTC
GACTGGGCCCGAGCAATGTTGCCGGAACAGTAGTGGCTAATGGGGCAGGAGGTCTGGCTGCCGCGTCCGGATCAGTTAAGGCGGAGGCCTCTATACTTCATTCAGAAGCT
CATCGTGGAGAGGCGGTGGTCGCCGCGGCTGAGGAATTGAACAAGGTGAGTAGATTGGCGAATTTGGAGGCATCATTCGAAGCTGATTTCGAAGCTATTAAATCTCGTGG
TGCGAATGCTCATGTCGTTCCCAATCATTGCGGTGAGTTTTGGTGTACTCCTTGCGAGATCCTGATTTATGCCAATTATGATAGGAATTCGTCAAAATGA
Protein sequenceShow/hide protein sequence
MEEKRRDAGNLPVNSTDSPSSEPASSRRRAGAQKRKASAVGGSNSSSAPSKRVTRDKSALSHPPNHIGPFTRARLGPSNVAGTVVANGAGGLAAASGSVKAEASILHSEA
HRGEAVVAAAEELNKVSRLANLEASFEADFEAIKSRGANAHVVPNHCGEFWCTPCEILIYANYDRNSSK