CuGenDBv2

Gene ID	Sgr013652
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	Very-long-chain 3-oxoacyl-CoA synthase
Genome location	tig00153941:46369..51805
RNA-Seq Expression	Sgr013652
Synteny	Sgr013652
Gene Ontology terms	GO:0006633 - fatty acid biosynthetic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0009922 - fatty acid elongase activity (molecular function) GO:0102756 - very-long-chain 3-ketoacyl-CoA synthase activity (molecular function)
InterPro domains	IPR002076 - ELO family

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571719.1 putative elongation of fatty acids protein, partial [Cucurbita argyrosperma subsp. sororia]

8.1e-16

40.98

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV
        PHLRPA+LKRI+V+HNL+LLALSFTMALGCTLATFSHAP          +   + P           +     +   L    G        HV   A +V
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV

Query:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA
         +       + S + L+  + + VHVL+          +   W     E        S V + L        FHVT KGSGCAGVWGWCFNV FYSSLLA
Subjt:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA

Query:  LFSDF
        LFSDF
Subjt:  LFSDF

XP_022963551.1 elongation of fatty acids protein sre1-like [Cucurbita moschata]

2.3e-15

40.49

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV
        PHLRPA+LKRI+V+HNL+LL LSFTMALGCTLATFSHAP          +   + P           +     +   L    G        HV   A +V
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV

Query:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA
         +       + S + L+  + + VHVL+          +   W     E        S V + L        FHVT KGSGCAGVWGWCFNV FYSSLLA
Subjt:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA

Query:  LFSDF
        LFSDF
Subjt:  LFSDF

XP_022967617.1 elongation of fatty acids protein sre1-like [Cucurbita maxima]

1.4e-15

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV
        PHLRPA+LK+I+++HNL+LLALSFTMALGCTLATFSHAP         ++   + P           +     +   L    G        HV   A +V
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV

Query:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA
         +       + S + L+  + + VHVL+          +   W     E        S V + L        FHVT KGSGCAGVWGWCFNV FYSSLLA
Subjt:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA

Query:  LFSDF
        LFSDF
Subjt:  LFSDF

XP_023531743.1 putative elongation of fatty acids protein DDB_G0272012 [Cucurbita pepo subsp. pepo]

5.2e-15

41.95

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV
        P+LR  ILKRISV+HNLILLALSFTMALGCTLATFSHAP              R P           +     +   L    G        HV   A +V
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV

Query:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA
         +       + S + L+  + + VHVL+          +   W     E        S V + L        FH TDKGSGCAGVWGWCFNVAFYSSLLA
Subjt:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA

Query:  LFSDF
        LFSDF
Subjt:  LFSDF

XP_023553932.1 elongation of fatty acids protein sre1-like [Cucurbita pepo subsp. pepo]

1.4e-15

40.98

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV
        PHLRPA+LKRI+V+HNL+LLALSFTMALGCTLATFSHAP          +   + P           +     +   L    G        HV   A +V
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV

Query:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA
         +       + S + L+  + + VHVL+          +   W     E        S V + L        FHVT KGSGCAGVWGWCFNV FYSSLLA
Subjt:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA

Query:  LFSDF
        LFSDF
Subjt:  LFSDF

TrEMBL top hits

e value

%identity

Alignment

A0A5D3CNK0 Very-long-chain 3-oxoacyl-CoA synthase

2.1e-14

39.91

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV
        P L P ILKRISV+HNLILLALSFTMALGCTL+TFSHAP          +   R P           +     +   L    G        HV   A +V
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV

Query:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA
         +       + S + L+  + + VHVL+          I   W     E        S V + L        FHVT KG+GCAGVWGWCFNV FYSSLLA
Subjt:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA

Query:  LFSDFMLRTTAAS
        LFSDF  +   A+
Subjt:  LFSDFMLRTTAAS

A0A6J1EM88 Very-long-chain 3-oxoacyl-CoA synthase

5.6e-15

41.46

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV
        P+LR  ILKRISV+HNLILLALSFTMALGCTLATFSHAP              R P           +     +   L    G        HV   A +V
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV

Query:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA
         +       + S + L+  + + VHVL+          +   W     E        S V + L        FH TDKGSGCAGVWGWCFNVAFYS+LLA
Subjt:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA

Query:  LFSDF
        LFSDF
Subjt:  LFSDF

A0A6J1HGE1 Very-long-chain 3-oxoacyl-CoA synthase

1.1e-15

40.49

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV
        PHLRPA+LKRI+V+HNL+LL LSFTMALGCTLATFSHAP          +   + P           +     +   L    G        HV   A +V
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV

Query:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA
         +       + S + L+  + + VHVL+          +   W     E        S V + L        FHVT KGSGCAGVWGWCFNV FYSSLLA
Subjt:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA

Query:  LFSDF
        LFSDF
Subjt:  LFSDF

A0A6J1HRB0 Very-long-chain 3-oxoacyl-CoA synthase

6.7e-16

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV
        PHLRPA+LK+I+++HNL+LLALSFTMALGCTLATFSHAP         ++   + P           +     +   L    G        HV   A +V
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV

Query:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA
         +       + S + L+  + + VHVL+          +   W     E        S V + L        FHVT KGSGCAGVWGWCFNV FYSSLLA
Subjt:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA

Query:  LFSDF
        LFSDF
Subjt:  LFSDF

A0A6J1JKX0 Very-long-chain 3-oxoacyl-CoA synthase

5.6e-15

41.46

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV
        P+LR  ILKRISV+HNLILLALSFTMALGCTLATFSHAP              R P           +     +   L    G        HV   A +V
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGD------HVLSMAALV

Query:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA
         +       + S + L+  + + VHVL+          +   W     E        S V + L        FH TDKGSGCAGVWGWCFNVAFYS+LLA
Subjt:  AVAV----PAGSGYQLI-GSRADVHVLL----------ILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWGWCFNVAFYSSLLA

Query:  LFSDF
        LFSDF
Subjt:  LFSDF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06470.1 GNS1/SUR4 membrane protein family

8.1e-06

30.84

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Query:  PHLRPAILKRISVIHNLILLALSFTMALGCTLA-TFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGDHVLSMAALVAVAVP
        P L P ILK I+ +H+LIL  LS  MA+GCTL+ T SHA +   +          D   +GP    +     + +       + GD +L +       + 
Subjt:  PHLRPAILKRISVIHNLILLALSFTMALGCTLA-TFSHAPTSTTSSACRRRRRRRDPSSSGPTSSTSPRSSTADVPARLPPCDGGDHVLSMAALVAVAVP

Query:  AGSGYQLIGSRADVHVLLILRSWGAAAVEEVSDGVSDSAVSV------QLCGVGSDAVFH--VTD---------------------KGSGCAGVWGWCFN
            +  +   A V V+  L      ++  ++  V++S V V       LC VGS   +   VTD                      GSGC G+WGWCFN
Subjt:  AGSGYQLIGSRADVHVLLILRSWGAAAVEEVSDGVSDSAVSV------QLCGVGSDAVFH--VTD---------------------KGSGCAGVWGWCFN

Query:  VAFYSSLLALFSDF
         AF +SLLALFS+F
Subjt:  VAFYSSLLALFSDF

Sequences

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CDS sequence

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ATGGAGAGAAAGATATTGGTTGTGGCTCACCTATGCATTCAGTATTGCTTTTCCATGCCGCTGAACAATCGCCTTAAGAGAGAGAAATGCAAATGTGGCTCACATATGCT
ATCGTCGGAAGTATTTGCCGTCGGCCAATTGCCTTCGACCAGCCCACAAGCTCACAACCTAGCAAAGCAACCCCCTTCTTTCTGTTCTAATTTAAAGCCCTTCAAATCTC
TCCCATTCTCTCTAAACTTTTGCTCTCAGAGAGATTCATTAAGCCACACCTTCTGTGTTTTCTTCCCTCCCTCCTCCTCCTTCCACGGCGGCGCGTTTTCCGAGAATGAG
TCTCAACATCTCCGACAACCTCCATTACTGGTTGGTAGACCACCCAAAAATCCTCAACTTCTCTTGGTCTCAGGGCCAAACCCTAGGCTCGTCTCCACTGTTCCTCACCG
TCACCGTCGTCTCCTACCTCTCTCTCACTTTCCTCCTCTCCAACGTCTCTCTCCCCACCTCCGTCCGGCCATTCTGAAGCGAATCTCTGTCATCCACAACCTCATTCTTC
TCGCCCTCTCTTTCACCATGGCCCTCGGTTGCACACTCGCCACCTTCTCCCACGCCCCCACCTCCACTACATCCTCTGCCTGCCGCCGAAGACGCCGTCGACGGGACCCC
TCTTCTTCTGGGCCTACATCTTCTACCTCTCCAAGATCGTCGACGGCTGACGTTCCTGCACGTCTACCACCATGCGACGGTGGTGATCATGTGCTATCTATGGCTGCACT
CGTCGCAGTCGCTGTTCCCGCTGGTTCTGGTTACCAACTCATCGGTTCACGTGCTGATGTACACGTACTACTTATCTTGCGCTCTTGGGGTGCGGCCGCGGTGGAAGAAG
TTAGTGACGGAGTGTCAGATAGCGCAGTTTCAGTTCAGCTTTGTGGTGTTGGCTCTGATGCTGTATTTCATGTCACCGATAAGGGCTCGGGCTGCGCCGGCGTCTGGGGC
TGGTGTTTCAACGTCGCCTTTTACTCCTCACTCCTCGCTTTGTTCTCGGATTTCATGCTAAGAACTACGGCGGCGTCGGTGGTGGAAAGATGGCGGCGCCGAACAAGTTG
GCTTGAAAACAAAGTTGGGTTTTCTTCCTCCGTCGTTCTAATTCGTTTGGGATAA

mRNA sequence

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Protein sequence

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MERKILVVAHLCIQYCFSMPLNNRLKREKCKCGSHMLSSEVFAVGQLPSTSPQAHNLAKQPPSFCSNLKPFKSLPFSLNFCSQRDSLSHTFCVFFPPSSSFHGGAFSENE
SQHLRQPPLLVGRPPKNPQLLLVSGPNPRLVSTVPHRHRRLLPLSHFPPLQRLSPHLRPAILKRISVIHNLILLALSFTMALGCTLATFSHAPTSTTSSACRRRRRRRDP
SSSGPTSSTSPRSSTADVPARLPPCDGGDHVLSMAALVAVAVPAGSGYQLIGSRADVHVLLILRSWGAAAVEEVSDGVSDSAVSVQLCGVGSDAVFHVTDKGSGCAGVWG
WCFNVAFYSSLLALFSDFMLRTTAASVVERWRRRTSWLENKVGFSSSVVLIRLG

Sgr013652 (gene) of Monk fruit (Qingpiguo) v1 genome