CuGenDBv2

Gene ID	Sgr014403
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	Thylakoid protein sll1769
Genome location	tig00000536:495262..499543
RNA-Seq Expression	Sgr014403
Synteny	Sgr014403
Gene Ontology terms	GO:0010027 - thylakoid membrane organization (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domains	IPR040003 - Plastoglobular protein 18-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6592865.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

5.2e-38

77.87

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Query:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPI--SPSITSPTIAVTSSPTTSTY
        +GDGDSRTVL+AFFLGKALAEALTER+EST+GEVLSGIGRLQAEQQKQILDFQE+V+ERAK+A++KAARDAK+VQGPI  S SI SPTI V SS T+ST 
Subjt:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPI--SPSITSPTIAVTSSPTTSTY

Query:  RQPPSKPDPDSETAMNQDPPLG
        +Q  S P  DS TA NQDPPLG
Subjt:  RQPPSKPDPDSETAMNQDPPLG

XP_022154385.1 uncharacterized protein At4g13200, chloroplastic [Momordica charantia]

8.5e-41

78.91

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Query:  YDAGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTY
        + +GDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAE+QKQI+DFQE+VIERAKRAKDKAARD+ +VQ PISPSITSPTIAV     TST 
Subjt:  YDAGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTY

Query:  RQPPSKPDPDSETAMNQDPPLGLTNNEE
         Q  SKPDP SE+ +N DPPL +TN+EE
Subjt:  RQPPSKPDPDSETAMNQDPPLGLTNNEE

XP_023005089.1 uncharacterized protein At4g13200, chloroplastic-like [Cucurbita maxima]

6.7e-38

78.69

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Query:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPI--SPSITSPTIAVTSSPTTSTY
        +GD DSRTVL+AFFLGKALAEALTER+EST+GEVLSGIGRLQAEQQKQILDFQE+VIERAK+A++KAARDAK+VQGPI  S SI SPTI V SS TTST 
Subjt:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPI--SPSITSPTIAVTSSPTTSTY

Query:  RQPPSKPDPDSETAMNQDPPLG
        +Q  S P  DS TA NQDPPLG
Subjt:  RQPPSKPDPDSETAMNQDPPLG

XP_023514675.1 uncharacterized protein At4g13200, chloroplastic-like [Cucurbita pepo subsp. pepo]

3.9e-38

78.69

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Query:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPI--SPSITSPTIAVTSSPTTSTY
        +GDGDSRTVL+AFFLGKALAEALTER+EST+GEVLSGIGRLQAEQQKQILDFQE+VIERAK+A++KAARDAK+VQGPI  S SI SPTI V SS T+ST 
Subjt:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPI--SPSITSPTIAVTSSPTTSTY

Query:  RQPPSKPDPDSETAMNQDPPLG
        +Q  S P  DS TA NQDPPLG
Subjt:  RQPPSKPDPDSETAMNQDPPLG

XP_038900031.1 uncharacterized protein At4g13200, chloroplastic [Benincasa hispida]

1.3e-44

86.67

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Query:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTYRQ
        +GDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQI DFQE+VIERAK+AKDKAARDAK+VQGP+S SITSPTI VTSSPT ST RQ
Subjt:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTYRQ

Query:  PPSKPDPDSETAMNQDPPLG
          S PD DSET +NQDPPLG
Subjt:  PPSKPDPDSETAMNQDPPLG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6Q2 Uncharacterized protein

4.7e-37

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Query:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTYRQ
        +GDGDSRTVLDAFFLGKALAEALTERIEST+GEVLSGIGRLQAEQQKQI DFQ++VIERAK+AK+KAARD+K+VQGP+S S+ SP I V SSPT+S+   
Subjt:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTYRQ

Query:  PPSKPDPDSETAMNQDPPLG
            PD DSE+ +NQDP LG
Subjt:  PPSKPDPDSETAMNQDPPLG

A0A1S3BHX5 uncharacterized protein At4g13200, chloroplastic isoform X1

1.6e-37

74.17

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Query:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTYRQ
        +GDGDSRT+LDAFFLGKALAEALTERIEST+GEVLSGIG+LQAEQQKQI DFQ++VIERAK+AK+KAAR+AK+VQ P+S S+ SPTI V+SSPT+S+   
Subjt:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTYRQ

Query:  PPSKPDPDSETAMNQDPPLG
            PD DSE+ +NQDPPLG
Subjt:  PPSKPDPDSETAMNQDPPLG

A0A6J1DJG4 uncharacterized protein At4g13200, chloroplastic

4.1e-41

78.91

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Query:  YDAGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTY
        + +GDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAE+QKQI+DFQE+VIERAKRAKDKAARD+ +VQ PISPSITSPTIAV     TST 
Subjt:  YDAGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTY

Query:  RQPPSKPDPDSETAMNQDPPLGLTNNEE
         Q  SKPDP SE+ +N DPPL +TN+EE
Subjt:  RQPPSKPDPDSETAMNQDPPLGLTNNEE

A0A6J1H854 uncharacterized protein At4g13200, chloroplastic-like

9.5e-38

77.05

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Query:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPI--SPSITSPTIAVTSSPTTSTY
        +GDGDSRTVL+AFFLGKALAEALTER+EST+GEVLSGIGRLQAEQQKQ LDFQE+V+ERAK+A++KAARDAK+VQGPI  S SI SPTI V SS T+ST 
Subjt:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPI--SPSITSPTIAVTSSPTTSTY

Query:  RQPPSKPDPDSETAMNQDPPLG
        +Q  S P  DS TA NQDPPLG
Subjt:  RQPPSKPDPDSETAMNQDPPLG

A0A6J1KY61 uncharacterized protein At4g13200, chloroplastic-like

3.3e-38

78.69

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Query:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPI--SPSITSPTIAVTSSPTTSTY
        +GD DSRTVL+AFFLGKALAEALTER+EST+GEVLSGIGRLQAEQQKQILDFQE+VIERAK+A++KAARDAK+VQGPI  S SI SPTI V SS TTST 
Subjt:  AGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPI--SPSITSPTIAVTSSPTTSTY

Query:  RQPPSKPDPDSETAMNQDPPLG
        +Q  S P  DS TA NQDPPLG
Subjt:  RQPPSKPDPDSETAMNQDPPLG

SwissProt top hits

e value

%identity

Alignment

P73628 Thylakoid protein sll1769

6.0e-05

36.71

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Query:  VLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTI
        VL AFFLG+A AE L+E++E  V   LS +G+  AEQ++ +  F  +V  RA     +       V GP+S      T+
Subjt:  VLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTI

Q8LDV3 Uncharacterized protein At4g13200, chloroplastic

7.0e-22

45.14

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Query:  SNFEDELYMLVQMGLRDSKLVAAAAPAPLYDAGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAAR
        SNFE     L     R S  + +       D+G+ ++++VLDAFFLGKALAE + ERIESTVGEVLS IG+ QAEQQKQ+ + QE+V+ERAK+AK++AAR
Subjt:  SNFEDELYMLVQMGLRDSKLVAAAAPAPLYDAGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAAR

Query:  DAKQVQGPISPSITSPTIAVTSSPTTSTYRQPPSKPDPDSETAM
        +  + QG     + S  +A+T +P         S    +S+T M
Subjt:  DAKQVQGPISPSITSPTIAVTSSPTTSTYRQPPSKPDPDSETAM

Arabidopsis top hits

e value

%identity

Alignment

AT4G13200.1 unknown protein

5.0e-23

45.14

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Query:  SNFEDELYMLVQMGLRDSKLVAAAAPAPLYDAGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAAR
        SNFE     L     R S  + +       D+G+ ++++VLDAFFLGKALAE + ERIESTVGEVLS IG+ QAEQQKQ+ + QE+V+ERAK+AK++AAR
Subjt:  SNFEDELYMLVQMGLRDSKLVAAAAPAPLYDAGDGDSRTVLDAFFLGKALAEALTERIESTVGEVLSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAAR

Query:  DAKQVQGPISPSITSPTIAVTSSPTTSTYRQPPSKPDPDSETAM
        +  + QG     + S  +A+T +P         S    +S+T M
Subjt:  DAKQVQGPISPSITSPTIAVTSSPTTSTYRQPPSKPDPDSETAM

Sequences

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CDS sequence

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ATGCAATACATGGGAGGCCCTCCTAGTCCCAGGGCAAGGAAAAGACGGTGGCTATACTACAGACTAAACCCAAAATTACCCACCATTCTTCTCCATCTTTCGCTGTTTCG
CGCTGCTCTTCCACTCCCTCAAATCTCAAACTTCGAGGACGAATTATACATGTTGGTCCAAATGGGTCTCCGAGATTCAAAGCTCGTTGCAGCAGCAGCTCCGGCTCCGC
TGTATGATGCAGGTGATGGTGACAGCAGGACTGTTCTAGATGCCTTTTTCTTAGGAAAAGCTTTAGCAGAAGCCTTAACTGAGCGTATCGAGTCAACAGTTGGGGAGGTT
TTGAGCGGGATTGGCAGGCTGCAAGCTGAACAACAAAAACAAATTCTTGATTTCCAGGAGGATGTGATAGAAAGAGCCAAAAGAGCCAAGGATAAAGCTGCACGTGATGC
CAAACAAGTACAAGGACCCATCTCCCCTTCAATAACATCGCCTACGATTGCAGTTACTTCATCTCCAACTACTTCAACCTATCGACAACCGCCCTCAAAACCAGACCCCG
ATTCAGAAACTGCCATGAACCAGGATCCTCCCCTCGGGTTAACGAATAACGAAGAGTAA

mRNA sequence

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Protein sequence

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MQYMGGPPSPRARKRRWLYYRLNPKLPTILLHLSLFRAALPLPQISNFEDELYMLVQMGLRDSKLVAAAAPAPLYDAGDGDSRTVLDAFFLGKALAEALTERIESTVGEV
LSGIGRLQAEQQKQILDFQEDVIERAKRAKDKAARDAKQVQGPISPSITSPTIAVTSSPTTSTYRQPPSKPDPDSETAMNQDPPLGLTNNEE

Sgr014403 (gene) of Monk fruit (Qingpiguo) v1 genome