CuGenDBv2

Gene ID	Sgr014569
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	Photosystem II CP47 reaction center protein
Genome location	tig00000729:643976..648761
RNA-Seq Expression	Sgr014569
Synteny	Sgr014569
Gene Ontology terms	GO:0009767 - photosynthetic electron transport chain (biological process) GO:0009521 - photosystem (cellular component) GO:0016168 - chlorophyll binding (molecular function)
InterPro domains	IPR000932 - Photosystem antenna protein-like

Homology

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GenBank top hits

e value

%identity

Alignment

QYA18135.1 photosystem II CP47 chlorophyll apoprotein [Urtica angustifolia]

2.9e-08

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

YP_009631169.1 PsbB [Sanguisorba tenuifolia]

2.9e-08

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

YP_009757176.1 photosystem II CP47 chlorophyll apoprotein [Elatostema dissectum]

2.9e-08

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

YP_009865130.1 photosystem II CP47 chlorophyll apoprotein [Alchemilla argyrophylla]

2.9e-08

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

YP_010048012.1 photosystem II 47 kDa protein [Pilea cadierei]

2.9e-08

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

TrEMBL top hits

e value

%identity

Alignment

A0A1V0IZP4 Photosystem II CP47 reaction center protein

1.4e-08

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

A0A218KG68 Photosystem II CP47 reaction center protein

1.4e-08

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

A0A3P8MVS2 Photosystem II CP47 reaction center protein

1.4e-08

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

A0A6B9TSQ4 Photosystem II CP47 reaction center protein

1.4e-08

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

A0A6B9TU18 Photosystem II CP47 reaction center protein

1.4e-08

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

SwissProt top hits

e value

%identity

Alignment

A4GGD1 Photosystem II CP47 reaction center protein

1.5e-10

90.32

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GR+Q+VNPAWGVEGFDPFVPGG+ASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

A6MM62 Photosystem II CP47 reaction center protein

1.9e-10

93.55

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        G+VQ+VNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

Q09WZ1 Photosystem II CP47 reaction center protein

3.9e-11

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

Q2PMQ9 Photosystem II CP47 reaction center protein

1.5e-10

90.32

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GR+Q+VNPAWGVEGFDPFVPGG+ASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

Q2QD63 Photosystem II CP47 reaction center protein

3.9e-11

100

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

Arabidopsis top hits

e value

%identity

Alignment

ATCG00680.1 photosystem II reaction center protein B

2.3e-11

93.55

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Query:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG
        G+VQ VNPAWGVEGFDPFVPGGIASHHIAAG
Subjt:  GRVQAVNPAWGVEGFDPFVPGGIASHHIAAG

Sequences

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CDS sequence

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ATGCGGTCGTCAACATGCACATGCAGTGCAGAGGCAGATGAGGCTGGAAACCCGACCCGGCCCACTTCGGGAAGCCACGATCTTATGGAGCTCATGGGATTATGTCATTC
GTTGTCAGTACCTATTATGGGCCCCACCTCCCCAGCCCCTGCACTCCTCGTGGGCGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTG
TTCCGGGCGGAATAGCCTCTCATCATATTGCAGCAGGAAAAAGCAGACAGGAACCGTTTGATTCTCTAAGCAAGCTGTTAAGTGAGGCCCCGTTCTTTCTAATTCAAAAA
AGAAAAGAGGGGCCGTTTGAAGTGGAGACCCGGGAGGCAGCGAGCGTAGTTTACGGAGCGGGAGTCATCGTTCCAATAGCGAAGGAATTCGAACTATTGGCCGTAGTAGG
GGGCGCTGAACGACACATTCGAAAACTCAAGCGCACACTCGAAAGTGCTTCGAAAGGTTCCCTCGTCGTGAAAGAAGTAATGAAAGGGAAGGACGTTCAGACGTTTTGTT
CGATTCCGGCGCTTGCGTTCTCATGCCCGGAACCCTCGCGATTGATTGGGAAAAGCTATGGAACTTGGGTGTGGGTCTTTTGTCGAAATGGAATGGCCCATGAAGGCTGG
CTTTTCAAAGAGATACTTCAGCGGGTCCATCCTTGCAATCAGCATGGTCGTATAATGTTCGCCCAGCCCTTGGAACATACTACAGCCCCCATTCTCGTTCGGCTCTTGGA
ATCACATCCAGCCGTGGTTGGAACAGCTCTGTGCTGGGGCTCTCGGAAGCCCACAGCTTCTGCTTCTGAGTGGCATTGGACCGAGGCCGTCCCTCTCATCGTGGGGAATT
CCTGTGACCCCATAGGCTTTCGCTTTCGCGTCTCTCTAAAATTGCAGTCATGGTAA

mRNA sequence

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Protein sequence

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MRSSTCTCSAEADEAGNPTRPTSGSHDLMELMGLCHSLSVPIMGPTSPAPALLVGGRVQAVNPAWGVEGFDPFVPGGIASHHIAAGKSRQEPFDSLSKLLSEAPFFLIQK
RKEGPFEVETREAASVVYGAGVIVPIAKEFELLAVVGGAERHIRKLKRTLESASKGSLVVKEVMKGKDVQTFCSIPALAFSCPEPSRLIGKSYGTWVWVFCRNGMAHEGW
LFKEILQRVHPCNQHGRIMFAQPLEHTTAPILVRLLESHPAVVGTALCWGSRKPTASASEWHWTEAVPLIVGNSCDPIGFRFRVSLKLQSW

Sgr014569 (gene) of Monk fruit (Qingpiguo) v1 genome