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Sgr014906 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr014906
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionAtp-dependent rna helicase protein
Genome locationtig00002140:118929..119265
RNA-Seq ExpressionSgr014906
SyntenySgr014906
Gene Ontology termsGO:0045943 - positive regulation of transcription by RNA polymerase I (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022932160.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita moschata]9.2e-3491.25Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VE LL+QEVH+NDTL+IVGETGSGKTTQIPQFL+NAGFCRDGKAIGVTQPRRVAAVTVAKRV+EECGVEVGQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

XP_022985184.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita maxima]9.2e-3491.25Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VE LL+QEVH+NDTL+IVGETGSGKTTQIPQFL+NAGFCRDGKAIGVTQPRRVAAVTVAKRV+EECGVEVGQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

XP_023520426.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 [Cucurbita pepo subsp. pepo]9.2e-3491.25Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VE LL+QEVH+NDTL+IVGETGSGKTTQIPQFL+NAGFCRDGKAIGVTQPRRVAAVTVAKRV+EECGVEVGQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

XP_038904721.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 isoform X1 [Benincasa hispida]2.4e-3493.75Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VE LL+QEVH+NDTLIIVGETGSGKTTQIPQFL+NAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

XP_038904722.1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 isoform X2 [Benincasa hispida]2.4e-3493.75Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VE LL+QEVH+NDTLIIVGETGSGKTTQIPQFL+NAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

TrEMBL top hitse value%identityAlignment
A0A1S3CJ82 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH102.2e-3392.5Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VE LL+QEV +NDTLIIVGETGSGKTTQIPQFL+NAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

A0A5A7SXH3 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH102.2e-3392.5Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VE LL+QEV +NDTLIIVGETGSGKTTQIPQFL+NAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

A0A6J1DA28 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH101.7e-3391.25Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VEKLLVQ VH NDTLIIVG+TGSGKTTQIPQFL+NAGFCRDG+AIGVTQPRRVAAVTVAKRVAEECGVE+GQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

A0A6J1EVL1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH104.5e-3491.25Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VE LL+QEVH+NDTL+IVGETGSGKTTQIPQFL+NAGFCRDGKAIGVTQPRRVAAVTVAKRV+EECGVEVGQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

A0A6J1JAN7 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH104.5e-3491.25Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VE LL+QEVH+NDTL+IVGETGSGKTTQIPQFL+NAGFCRDGKAIGVTQPRRVAAVTVAKRV+EECGVEVGQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

SwissProt top hitse value%identityAlignment
F4IE66 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH106.2e-3383.75Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VEK LV+EV KND LIIVGETGSGKTTQ+PQFLYNAGFCR+GK IG+TQPRR+AAVTVAKRVAEEC V++GQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

O45244 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-41.1e-2164Show/hide
Query:  VQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        ++ V ++  LII GETGSGKTTQ+PQ+LY AGFC  GK IG TQPRRVAA++VA RVA+E G ++G +VGYSI+F
Subjt:  VQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

Q38953 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH51.2e-2060Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        ++K L+Q VH N  L+++GETGSGKTTQ+ Q+L  AG+   GK IG TQPRRVAA++VAKRVAEE G  +G++VGY+I+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

Q54MH3 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX162.7e-2065.79Show/hide
Query:  LVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        L+  V +   LIIVGETGSGKTTQIPQ+L+ AGF + GK IG TQPRRVAA++VA RVAEE G ++G +VGYSI+F
Subjt:  LVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

Q54NJ4 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx151.4e-2162.67Show/hide
Query:  VQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        ++ + +N  +I+VGETGSGKTTQIPQF+ +AG  R GK +GVTQPRRVAA++VAKRV+EE   E+G++VGYSI+F
Subjt:  VQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

Arabidopsis top hitse value%identityAlignment
AT1G26370.1 RNA helicase family protein4.4e-3483.75Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        VEK LV+EV KND LIIVGETGSGKTTQ+PQFLYNAGFCR+GK IG+TQPRR+AAVTVAKRVAEEC V++GQKVGYSI+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

AT1G32490.1 RNA helicase family protein7.3e-2160.53Show/hide
Query:  LVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        L++ V ++  L+IVG+TGSGKTTQIPQ+L+ AG+ + GK +G TQPRRVAA++VA RVA+E GV++G +VGYSI+F
Subjt:  LVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

AT1G32490.2 RNA helicase family protein7.3e-2160.53Show/hide
Query:  LVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        L++ V ++  L+IVG+TGSGKTTQIPQ+L+ AG+ + GK +G TQPRRVAA++VA RVA+E GV++G +VGYSI+F
Subjt:  LVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

AT3G26560.1 ATP-dependent RNA helicase, putative8.6e-2260Show/hide
Query:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        ++K L+Q VH N  L+++GETGSGKTTQ+ Q+L  AG+   GK IG TQPRRVAA++VAKRVAEE G  +G++VGY+I+F
Subjt:  VEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF

AT4G16680.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.5e-2163.16Show/hide
Query:  LVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF
        L++ + +N  L+IVGETGSGKTTQIPQ+L  AG+ + GK IG TQPRRVAA++VA RVA+E GV++G +VGYSI+F
Subjt:  LVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTTAGTTGAGAAACTTCTCGTCCAAGAGGTGCATAAAAACGATACATTGATTATTGTTGGTGAAACTGGAAGTGGAAAAACGACACAGATACCGCAGTTCCTGTA
TAATGCCGGATTTTGTCGAGATGGAAAAGCTATTGGGGTGACCCAACCTCGGCGTGTTGCTGCTGTAACTGTAGCCAAAAGAGTTGCTGAGGAATGTGGCGTCGAGGTGG
GCCAAAAGGTTGGGTATTCCATCAAATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCTTAGTTGAGAAACTTCTCGTCCAAGAGGTGCATAAAAACGATACATTGATTATTGTTGGTGAAACTGGAAGTGGAAAAACGACACAGATACCGCAGTTCCTGTA
TAATGCCGGATTTTGTCGAGATGGAAAAGCTATTGGGGTGACCCAACCTCGGCGTGTTGCTGCTGTAACTGTAGCCAAAAGAGTTGCTGAGGAATGTGGCGTCGAGGTGG
GCCAAAAGGTTGGGTATTCCATCAAATTTTAG
Protein sequenceShow/hide protein sequence
MCLVEKLLVQEVHKNDTLIIVGETGSGKTTQIPQFLYNAGFCRDGKAIGVTQPRRVAAVTVAKRVAEECGVEVGQKVGYSIKF