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Sgr014967 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr014967
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionsister chromatid cohesion protein PDS5 homolog A-like
Genome locationtig00002486:602357..636761
RNA-Seq ExpressionSgr014967
SyntenySgr014967
Gene Ontology termsGO:0007064 - mitotic sister chromatid cohesion (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039776 - Sister chromatid cohesion protein Pds5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022937151.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X1 [Cucurbita moschata]5.9e-3687.5Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK
        D+EQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLF A LS+ ERTRHWI+LFSLFNIHHEKAL Y+LLQKQRLQNELR+YL LR+KDK
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK

XP_022937155.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X3 [Cucurbita moschata]5.9e-3687.5Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK
        D+EQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLF A LS+ ERTRHWI+LFSLFNIHHEKAL Y+LLQKQRLQNELR+YL LR+KDK
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK

XP_022976679.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X3 [Cucurbita maxima]5.9e-3687.5Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK
        D+EQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLF A LS+ ERTRHWI+LFSLFNIHHEKAL Y+LLQKQRLQNELR+YL LR+KDK
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK

XP_023536012.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X2 [Cucurbita pepo subsp. pepo]5.9e-3687.5Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK
        D+EQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLF A LS+ ERTRHWI+LFSLFNIHHEKAL Y+LLQKQRLQNELR+YL LR+KDK
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK

XP_023536017.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X5 [Cucurbita pepo subsp. pepo]5.9e-3687.5Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK
        D+EQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLF A LS+ ERTRHWI+LFSLFNIHHEKAL Y+LLQKQRLQNELR+YL LR+KDK
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK

TrEMBL top hitse value%identityAlignment
A0A6J1F9K0 sister chromatid cohesion protein PDS5 homolog A-like isoform X12.9e-3687.5Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK
        D+EQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLF A LS+ ERTRHWI+LFSLFNIHHEKAL Y+LLQKQRLQNELR+YL LR+KDK
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK

A0A6J1IGF7 sister chromatid cohesion protein PDS5 homolog A-like isoform X52.9e-3687.5Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK
        D+EQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLF A LS+ ERTRHWI+LFSLFNIHHEKAL Y+LLQKQRLQNELR+YL LR+KDK
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK

A0A6J1IHJ2 sister chromatid cohesion protein PDS5 homolog A-like isoform X22.9e-3687.5Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK
        D+EQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLF A LS+ ERTRHWI+LFSLFNIHHEKAL Y+LLQKQRLQNELR+YL LR+KDK
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK

A0A6J1IK50 sister chromatid cohesion protein PDS5 homolog A-like isoform X42.9e-3687.5Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK
        D+EQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLF A LS+ ERTRHWI+LFSLFNIHHEKAL Y+LLQKQRLQNELR+YL LR+KDK
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK

A0A6J1IMW1 sister chromatid cohesion protein PDS5 homolog A-like isoform X12.9e-3687.5Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK
        D+EQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLF A LS+ ERTRHWI+LFSLFNIHHEKAL Y+LLQKQRLQNELR+YL LR+KDK
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G77600.1 ARM repeat superfamily protein2.6e-2155.06Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDKV
        ++EQIPCK+L+LC +K+C+EFRSQ +ELVL +DLF   L + ER RHW+  F++ N  H K+L  +L QK+RLQNELR  L L  K KV
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDKV

AT1G77600.2 ARM repeat superfamily protein2.6e-2155.06Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDKV
        ++EQIPCK+L+LC +K+C+EFRSQ +ELVL +DLF   L + ER RHW+  F++ N  H K+L  +L QK+RLQNELR  L L  K KV
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDKV

AT1G77600.3 ARM repeat superfamily protein2.6e-2155.06Show/hide
Query:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDKV
        ++EQIPCK+L+LC +K+C+EFRSQ +ELVL +DLF   L + ER RHW+  F++ N  H K+L  +L QK+RLQNELR  L L  K KV
Subjt:  DYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDKV

AT5G47690.1 binding1.3e-1236.79Show/hide
Query:  TEEFSLGIRKFVDGVRDQWPIDYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRS
        TE F +   +  DG  D    D+  IP K+L   YDKD   FRS  +E +L   LF +  S+ ++ +HWI +FS F+    KA   +L Q+QR+Q E++ 
Subjt:  TEEFSLGIRKFVDGVRDQWPIDYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRS

Query:  YLALRE
        YL++++
Subjt:  YLALRE

AT5G47690.2 binding1.3e-1236.79Show/hide
Query:  TEEFSLGIRKFVDGVRDQWPIDYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRS
        TE F +   +  DG  D    D+  IP K+L   YDKD   FRS  +E +L   LF +  S+ ++ +HWI +FS F+    KA   +L Q+QR+Q E++ 
Subjt:  TEEFSLGIRKFVDGVRDQWPIDYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSAHLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRS

Query:  YLALRE
        YL++++
Subjt:  YLALRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTTCAGGAGGGCAAGCCGATGGTCGGTTTGAGACAGGAGGATTGGCGAGAAATGAATTATACAGTGGAAGAAGGATGGAGGCTCTTTAGCCGTGAAGCGTCCTATGCAG
GACTGAAAATGAGAATGAGTGGTCGAGACAGAGGAGGATTGGCAAGAACTGAAGAATTCTCCCTTGGAATAAGGAAGTTTGTAGACGGTGTCAGAGATCAATGGCCAATT
GACTATGAACAGATCCCATGTAAAGTCTTGATGCTTTGCTATGATAAAGATTGTAAGGAGTTCAGGTCCCAGTGCATGGAACTTGTTCTTGTGGAAGATTTATTCTCAGC
TCATCTCTCTATTGGAGAAAGGACTAGACACTGGATCAATTTATTCTCTCTTTTCAACATACATCACGAAAAGGCTCTCAGATACGTTTTGTTGCAAAAACAGAGGTTAC
AAAATGAGTTGCGAAGTTATTTGGCTCTACGAGAAAAGGACAAGGTATGTTGCCTATCTTCTCTTCTAAATTCTGTAGTCAGGAACTCAAGAAGGAAACCATTCCCAGAT
TCCATCACTGTGGTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
GGTTCAGGAGGGCAAGCCGATGGTCGGTTTGAGACAGGAGGATTGGCGAGAAATGAATTATACAGTGGAAGAAGGATGGAGGCTCTTTAGCCGTGAAGCGTCCTATGCAG
GACTGAAAATGAGAATGAGTGGTCGAGACAGAGGAGGATTGGCAAGAACTGAAGAATTCTCCCTTGGAATAAGGAAGTTTGTAGACGGTGTCAGAGATCAATGGCCAATT
GACTATGAACAGATCCCATGTAAAGTCTTGATGCTTTGCTATGATAAAGATTGTAAGGAGTTCAGGTCCCAGTGCATGGAACTTGTTCTTGTGGAAGATTTATTCTCAGC
TCATCTCTCTATTGGAGAAAGGACTAGACACTGGATCAATTTATTCTCTCTTTTCAACATACATCACGAAAAGGCTCTCAGATACGTTTTGTTGCAAAAACAGAGGTTAC
AAAATGAGTTGCGAAGTTATTTGGCTCTACGAGAAAAGGACAAGGTATGTTGCCTATCTTCTCTTCTAAATTCTGTAGTCAGGAACTCAAGAAGGAAACCATTCCCAGAT
TCCATCACTGTGGTTTCTTAG
Protein sequenceShow/hide protein sequence
VQEGKPMVGLRQEDWREMNYTVEEGWRLFSREASYAGLKMRMSGRDRGGLARTEEFSLGIRKFVDGVRDQWPIDYEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFSA
HLSIGERTRHWINLFSLFNIHHEKALRYVLLQKQRLQNELRSYLALREKDKVCCLSSLLNSVVRNSRRKPFPDSITVVS