CuGenDBv2

Gene ID	Sgr015436
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	mediator of RNA polymerase II transcription subunit 15a-like
Genome location	tig00003651:289673..291063
RNA-Seq Expression	Sgr015436
Synteny	Sgr015436
Gene Ontology terms	GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003713 - transcription coactivator activity (molecular function) GO:0031490 - chromatin DNA binding (molecular function)
InterPro domains	IPR036529 - Coactivator CBP, KIX domain superfamily IPR036546 - Mediator complex subunit 15, KIX domain IPR044661 - Mediator of RNA polymerase II transcription subunit 15a/b/c-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAB2061287.1 hypothetical protein ES319_A10G076300v1 [Gossypium barbadense]

7.6e-16

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        GEPTMD GDWR++LQPDSRQRIVNKIM+TLKRHLP S  EGLNELRKIAV
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

TYJ13874.1 hypothetical protein E1A91_A10G079200v1 [Gossypium mustelinum]

7.6e-16

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        GEPTMD GDWR++LQPDSRQRIVNKIM+TLKRHLP S  EGLNELRKIAV
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

XP_022716550.1 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 15a-like [Durio zibethinus]

5.8e-16

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        GEPTMDAGDWR++LQPDSRQRIVNKIM+TLKRHLP S  EGLNELRKIA+
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

XP_040934659.1 mediator of RNA polymerase II transcription subunit 15a isoform X1 [Gossypium hirsutum]

7.6e-16

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        GEPTMD GDWR++LQPDSRQRIVNKIM+TLKRHLP S  EGLNELRKIAV
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

XP_040934660.1 mediator of RNA polymerase II transcription subunit 15a isoform X2 [Gossypium hirsutum]

7.6e-16

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        GEPTMD GDWR++LQPDSRQRIVNKIM+TLKRHLP S  EGLNELRKIAV
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

TrEMBL top hits

e value

%identity

Alignment

A0A0B0PQG8 Putative mediator of RNA polymerase II transcription subunit 15

3.7e-16

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        GEPTMD GDWR++LQPDSRQRIVNKIM+TLKRHLP S  EGLNELRKIAV
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

A0A5D2NPR9 KIX_2 domain-containing protein

3.7e-16

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        GEPTMD GDWR++LQPDSRQRIVNKIM+TLKRHLP S  EGLNELRKIAV
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

A0A5D2NQW5 KIX_2 domain-containing protein

3.7e-16

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        GEPTMD GDWR++LQPDSRQRIVNKIM+TLKRHLP S  EGLNELRKIAV
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

A0A6P4PDM4 mediator of RNA polymerase II transcription subunit 15a

3.7e-16

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        GEPTMD GDWR++LQPDSRQRIVNKIM+TLKRHLP S  EGLNELRKIAV
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

A0A6P5WKA1 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 15a-like

2.8e-16

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        GEPTMDAGDWR++LQPDSRQRIVNKIM+TLKRHLP S  EGLNELRKIA+
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

SwissProt top hits

e value

%identity

Alignment

F4I171 Mediator of RNA polymerase II transcription subunit 15a

6.1e-16

75.51

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIA
        GEP MD GDWR++L PDSRQ+IVNKIMETLK+HLP S  EG+NELR+IA
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIA

Arabidopsis top hits

e value

%identity

Alignment

AT1G15780.1 unknown protein

4.3e-17

75.51

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Query:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIA
        GEP MD GDWR++L PDSRQ+IVNKIMETLK+HLP S  EG+NELR+IA
Subjt:  GEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIA

AT1G15790.1 unknown protein

1.6e-08

46.94

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Query:  EPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        EP ++ GDWR++   DSRQ+ +N +++TLK+ +P S  EG++EL +IAV
Subjt:  EPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

AT1G15790.2 unknown protein

1.6e-08

46.94

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Query:  EPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV
        EP ++ GDWR++   DSRQ+ +N +++TLK+ +P S  EG++EL +IAV
Subjt:  EPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAV

Sequences

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CDS sequence

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GTTGTTTTCAAACTTTTGGAGAACCTACCATGGACGCTGGGGATTGGAGGTCCGAATTGCAGCCCGATTCTCGACAGCGAATTGTCAACAAGATAATGGAGACTTTGAAG
AGGCACCTTCCTGTTTCTAGTGACGAGGGATTGAATGAGCTGAGGAAAATTGCTGTAAG

mRNA sequence

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GTTGTTTTCAAACTTTTGGAGAACCTACCATGGACGCTGGGGATTGGAGGTCCGAATTGCAGCCCGATTCTCGACAGCGAATTGTCAACAAGATAATGGAGACTTTGAAG
AGGCACCTTCCTGTTTCTAGTGACGAGGGATTGAATGAGCTGAGGAAAATTGCTGTAAG

Protein sequence

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CFQTFGEPTMDAGDWRSELQPDSRQRIVNKIMETLKRHLPVSSDEGLNELRKIAVX

Sgr015436 (gene) of Monk fruit (Qingpiguo) v1 genome