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Sgr015477 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr015477
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionRNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
Genome locationtig00003991:734486..739235
RNA-Seq ExpressionSgr015477
SyntenySgr015477
Gene Ontology termsGO:0070940 - dephosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008420 - RNA polymerase II CTD heptapeptide repeat phosphatase activity (molecular function)
GO:0043175 - RNA polymerase core enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581990.1 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein, partial [Cucurbita argyrosperma subsp. sororia]9.5e-1076.92Show/hide
Query:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
        MGKTKECSR+ SNL  ADN  EDIL +ESAEAC+ ALSQAA AITS QNEVS
Subjt:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
KAG7018411.1 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein [Cucurbita argyrosperma subsp. argyrosperma]9.5e-1076.92Show/hide
Query:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
        MGKTKECSR+ SNL  ADN  EDIL +ESAEAC+ ALSQAA AITS QNEVS
Subjt:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
XP_022980005.1 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X2 [Cucurbita maxima]2.1e-0975Show/hide
Query:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
        MGKTKECSR+ SNL  ADN  ED+L +ESAEAC+ ALSQAA AITS QNEVS
Subjt:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
XP_023528028.1 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X1 [Cucurbita pepo subsp. pepo]9.5e-1076.92Show/hide
Query:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
        MGKTKECSR+ SNL  ADN  EDIL +ESAEAC+ ALSQAA AITS QNEVS
Subjt:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
XP_023528029.1 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog isoform X2 [Cucurbita pepo subsp. pepo]9.5e-1076.92Show/hide
Query:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
        MGKTKECSR+ SNL  ADN  EDIL +ESAEAC+ ALSQAA AITS QNEVS
Subjt:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
TrEMBL top hitse value%identityAlignment
A0A0A0KVU3 RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog2.3e-0975Show/hide
Query:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
        MGKTKECSR  SNL   DND EDIL +ESAEAC+ ALSQAA AITS Q+EVS
Subjt:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
A0A6J1GVD1 RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog1.3e-0975Show/hide
Query:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
        MGKTKECSR+ SNL  ADN  EDIL +ESAEAC+ ALSQAA AITS +NEVS
Subjt:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
A0A6J1GWL9 RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog1.3e-0975Show/hide
Query:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
        MGKTKECSR+ SNL  ADN  EDIL +ESAEAC+ ALSQAA AITS +NEVS
Subjt:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
A0A6J1IUY3 RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog1.0e-0975Show/hide
Query:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
        MGKTKECSR+ SNL  ADN  ED+L +ESAEAC+ ALSQAA AITS QNEVS
Subjt:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
A0A6J1IY57 RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog1.0e-0975Show/hide
Query:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
        MGKTKECSR+ SNL  ADN  ED+L +ESAEAC+ ALSQAA AITS QNEVS
Subjt:  MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGACAAAGGAATGTTCCAGAATCAGGAGCAATTTGGCAACTGCAGACAATGATAAAGAGGACATATTATGCATTGAATCTGCTGAAGCCTGTTCAAGTGCACT
GAGCCAGGCAGCTGGAGCAATTACTTCCAGGCAAAATGAGGTCTCTGGTGTAGATAAAGCTTTTCCGTCCTCTTCTTTTTCTCCTCCAACCTCCGGCATCGACATTCCTC
ATAGGACAACTTCGACCCCACCATTTCTGGGTATC
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGACAAAGGAATGTTCCAGAATCAGGAGCAATTTGGCAACTGCAGACAATGATAAAGAGGACATATTATGCATTGAATCTGCTGAAGCCTGTTCAAGTGCACT
GAGCCAGGCAGCTGGAGCAATTACTTCCAGGCAAAATGAGGTCTCTGGTGTAGATAAAGCTTTTCCGTCCTCTTCTTTTTCTCCTCCAACCTCCGGCATCGACATTCCTC
ATAGGACAACTTCGACCCCACCATTTCTGGGTATC
Protein sequenceShow/hide protein sequence
MGKTKECSRIRSNLATADNDKEDILCIESAEACSSALSQAAGAITSRQNEVSGVDKAFPSSSFSPPTSGIDIPHRTTSTPPFLGI