CuGenDBv2

Gene ID	Sgr015681
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	nuclear pore complex protein NUP160
Genome location	tig00004872:255585..256080
RNA-Seq Expression	Sgr015681
Synteny	Sgr015681
Gene Ontology terms	GO:0006913 - nucleocytoplasmic transport (biological process) GO:0033036 - macromolecule localization (biological process) GO:0043170 - macromolecule metabolic process (biological process) GO:0071702 - organic substance transport (biological process) GO:0071705 - nitrogen compound transport (biological process) GO:0005643 - nuclear pore (cellular component)
InterPro domains	IPR021717 - Nucleoporin Nup120/160

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579709.1 Nuclear pore complex protein 160, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-46

78.33

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Query:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA
        + +ELL+FST+NEFRR+GLRI+FP++LHPAVFVC NEIS S  HP LMY VTSSG+AYCLKLRN+SSY+SCSVIPLDEVVEFNL T P+ KPVTSVSAI+
Subjt:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA

Query:  GCLVIGRNDGSVSCSDLGRL
        GCLVIGRNDGSVSC  LG L
Subjt:  GCLVIGRNDGSVSCSDLGRL

KAG7017151.1 Nuclear pore complex protein [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-46

78.33

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Query:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA
        + +ELL+FST+NEFRR+GLRI+FP++LHPAVFVC NEIS S  HP LMY VTSSG+AYCLKLRN+SSY+SCSVIPLDEVVEFNL T P+ KPVTSVSAI+
Subjt:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA

Query:  GCLVIGRNDGSVSCSDLGRL
        GCLVIGRNDGSVSC  LG L
Subjt:  GCLVIGRNDGSVSCSDLGRL

XP_022155989.1 nuclear pore complex protein NUP160 isoform X1 [Momordica charantia]

8.0e-48

84.03

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Query:  ALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIAG
        ALE  EFST+NEFRRVGLRISFPD+LHPAVFVCKNEISPS +HPLL+Y VT SGVAYCLKLRNISSY+SCS IPLDEVVE +L+T PN KPVTSVSAIAG
Subjt:  ALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIAG

Query:  CLVIGRNDGSVSCSDLGRL
        CLVIGRNDGSVSC  LG L
Subjt:  CLVIGRNDGSVSCSDLGRL

XP_022155992.1 nuclear pore complex protein NUP160 isoform X2 [Momordica charantia]

8.0e-48

84.03

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Query:  ALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIAG
        ALE  EFST+NEFRRVGLRISFPD+LHPAVFVCKNEISPS +HPLL+Y VT SGVAYCLKLRNISSY+SCS IPLDEVVE +L+T PN KPVTSVSAIAG
Subjt:  ALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIAG

Query:  CLVIGRNDGSVSCSDLGRL
        CLVIGRNDGSVSC  LG L
Subjt:  CLVIGRNDGSVSCSDLGRL

XP_022969806.1 nuclear pore complex protein NUP160 [Cucurbita maxima]

2.0e-46

78.33

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Query:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA
        + +ELL+FST+NEFRR+GLRI+FP++LHPAVFVC NEIS S  HP LMY VTSSG+AYCLKLRN+SSY+SCSVIPLDEVVEFNL T P+ KPVTSVSAI+
Subjt:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA

Query:  GCLVIGRNDGSVSCSDLGRL
        GCLVIGRNDGSVSC  LG L
Subjt:  GCLVIGRNDGSVSCSDLGRL

TrEMBL top hits

e value

%identity

Alignment

A0A5D3B8G5 Nuclear pore complex protein NUP160 isoform X5

1.1e-45

79.17

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Query:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA
        + +ELLEFSTSNEFRR+GLRI+FP++LHPAVFVCKNEIS S  HP LMY VTSSG AYCLKLRN+SSY+S S IPLDEVVEFNL+T P+ KPVTSVSAI+
Subjt:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA

Query:  GCLVIGRNDGSVSCSDLGRL
        GCLVIGRNDGSVSC  LG L
Subjt:  GCLVIGRNDGSVSCSDLGRL

A0A6J1DQV6 nuclear pore complex protein NUP160 isoform X2

3.9e-48

84.03

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Query:  ALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIAG
        ALE  EFST+NEFRRVGLRISFPD+LHPAVFVCKNEISPS +HPLL+Y VT SGVAYCLKLRNISSY+SCS IPLDEVVE +L+T PN KPVTSVSAIAG
Subjt:  ALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIAG

Query:  CLVIGRNDGSVSCSDLGRL
        CLVIGRNDGSVSC  LG L
Subjt:  CLVIGRNDGSVSCSDLGRL

A0A6J1DRY3 nuclear pore complex protein NUP160 isoform X1

3.9e-48

84.03

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Query:  ALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIAG
        ALE  EFST+NEFRRVGLRISFPD+LHPAVFVCKNEISPS +HPLL+Y VT SGVAYCLKLRNISSY+SCS IPLDEVVE +L+T PN KPVTSVSAIAG
Subjt:  ALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIAG

Query:  CLVIGRNDGSVSCSDLGRL
        CLVIGRNDGSVSC  LG L
Subjt:  CLVIGRNDGSVSCSDLGRL

A0A6J1ELG7 nuclear pore complex protein NUP160

1.1e-45

77.5

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Query:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA
        + +ELL+FST+NEFRR+GLRI+FP++LHPAVFVC NEIS S  HP LMY VTSSG+AYCLKLRN+SSY+SCSVIPLDEVVEFNL T  + KPVTSVSAI+
Subjt:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA

Query:  GCLVIGRNDGSVSCSDLGRL
        GCLVIGRNDGSVSC  LG L
Subjt:  GCLVIGRNDGSVSCSDLGRL

A0A6J1HYU1 nuclear pore complex protein NUP160

9.5e-47

78.33

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Query:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA
        + +ELL+FST+NEFRR+GLRI+FP++LHPAVFVC NEIS S  HP LMY VTSSG+AYCLKLRN+SSY+SCSVIPLDEVVEFNL T P+ KPVTSVSAI+
Subjt:  YALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIA

Query:  GCLVIGRNDGSVSCSDLGRL
        GCLVIGRNDGSVSC  LG L
Subjt:  GCLVIGRNDGSVSCSDLGRL

SwissProt top hits

e value

%identity

Alignment

Q9C811 Nuclear pore complex protein NUP160

3.2e-15

41.18

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Query:  SEDSTYALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTS
        ++ S  ALELL+ S  + F   GLR  F  +L P  FV  +E   S      +Y +T SGV Y LKL N  +Y S SV PLD ++  +++   N   VTS
Subjt:  SEDSTYALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTS

Query:  VSAIAGCLVIGRNDGSVSC
        V+A  G + +GR+DG VSC
Subjt:  VSAIAGCLVIGRNDGSVSC

Arabidopsis top hits

e value

%identity

Alignment

AT1G33410.1 SUPPRESSOR OF AUXIN RESISTANCE1

2.3e-16

41.18

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Query:  SEDSTYALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTS
        ++ S  ALELL+ S  + F   GLR  F  +L P  FV  +E   S      +Y +T SGV Y LKL N  +Y S SV PLD ++  +++   N   VTS
Subjt:  SEDSTYALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTS

Query:  VSAIAGCLVIGRNDGSVSC
        V+A  G + +GR+DG VSC
Subjt:  VSAIAGCLVIGRNDGSVSC

AT1G33410.2 SUPPRESSOR OF AUXIN RESISTANCE1

2.3e-16

41.18

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Query:  SEDSTYALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTS
        ++ S  ALELL+ S  + F   GLR  F  +L P  FV  +E   S      +Y +T SGV Y LKL N  +Y S SV PLD ++  +++   N   VTS
Subjt:  SEDSTYALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTS

Query:  VSAIAGCLVIGRNDGSVSC
        V+A  G + +GR+DG VSC
Subjt:  VSAIAGCLVIGRNDGSVSC

Sequences

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CDS sequence

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GAGGATTCGGAAGATTCTACCTATGCACTCGAGTTGCTTGAGTTTTCAACTTCCAACGAATTTCGTAGGGTTGGTCTGCGAATTTCATTTCCGGATTCACTTCACCCAGC
TGTGTTTGTTTGCAAAAATGAGATTTCCCCGTCTCCCGTACATCCTCTCTTGATGTACGTGGTGACTTCGTCTGGAGTTGCATATTGTTTGAAGCTGAGAAATATTTCTT
CGTACCTATCCTGCTCTGTCATCCCTCTTGATGAGGTTGTGGAGTTTAATCTGAAAACCTGTCCGAACTACAAACCAGTGACCAGCGTATCAGCTATAGCTGGATGTCTC
GTGATTGGGAGAAATGATGGATCAGTTTCATGTTCAGACTTGGGTCGCTTGACCAACATACCCCTG

mRNA sequence

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Protein sequence

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EDSEDSTYALELLEFSTSNEFRRVGLRISFPDSLHPAVFVCKNEISPSPVHPLLMYVVTSSGVAYCLKLRNISSYLSCSVIPLDEVVEFNLKTCPNYKPVTSVSAIAGCL
VIGRNDGSVSCSDLGRLTNIPL

Sgr015681 (gene) of Monk fruit (Qingpiguo) v1 genome