| GenBank top hits | e value | %identity | Alignment |
|---|
| RVW25417.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.1e-47 | 49.55 | Show/hide |
Query: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
MLNYKVVATP N NEKLQ EDGTE+ DAR F+SL+GGLIYL HTRPDI+F+V
Subjt: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
Query: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
GAV WSSKKQA TALS+SEAEY AATSSACQAVWLRR+ D +Q E T I+CDNKA A+TKNP +HGRTKH+DIR
Subjt: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
Query: FRFIRDLVAKDVIVLKYCSTDE
FIRDLV + +VL+YC+T+E
Subjt: FRFIRDLVAKDVIVLKYCSTDE
|
|
| RVW26239.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.1e-48 | 57.84 | Show/hide |
Query: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV---------------------------------GAVTWSSKKQATTAL
MLN KVVAT N NEKLQ EDGTE+ DAR FKSL+GGLIYL HTRPDI+F+V GAV WSSKKQA TAL
Subjt: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV---------------------------------GAVTWSSKKQATTAL
Query: STSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYCSTDE
S+SE EY ATSSACQAVWLRR+ D +Q E T I+CDNKA A+TKNP +HGRTKH+DIR FIRDLV + +VL+YC+T+E
Subjt: STSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYCSTDE
|
|
| RVW67792.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.7e-46 | 49.55 | Show/hide |
Query: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
MLN KVVATP N NEKLQ EDGTE+ DAR F+SL+GGLIYL HTRPDI+F+V
Subjt: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
Query: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
GAV WSSKKQA TALS+SEAEY AATSSACQAVWLRR+ D +Q E T I+CDNKA A+TKNPT+HGRTKH+DIR
Subjt: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
Query: FRFIRDLVAKDVIVLKYCSTDE
FIRDLV + +VL+YC+T+E
Subjt: FRFIRDLVAKDVIVLKYCSTDE
|
|
| RVW68253.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.1e-47 | 49.55 | Show/hide |
Query: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
MLNYKVVATP N NEKLQ EDGTE+ DAR F+SL+GGLIYL HTRPDI+F+V
Subjt: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
Query: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
GAV WSSKKQA TALS+SEAEY AATSSACQAVWLRR+ D +Q E T I+CDNKA A+TKNP +HGRTKH+DIR
Subjt: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
Query: FRFIRDLVAKDVIVLKYCSTDE
FIRDLV + +VL+YC+T+E
Subjt: FRFIRDLVAKDVIVLKYCSTDE
|
|
| RVX14143.1 putative alpha-mannosidase [Vitis vinifera] | 2.1e-47 | 57.22 | Show/hide |
Query: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSVGAVT----------------------------WSSKKQATTALSTSEA
MLN KVVA P N NEKLQ EDGTE+ DAR F+SL+GGLIYL HTRPDI+F+VG ++ SKKQA TALS+SEA
Subjt: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSVGAVT----------------------------WSSKKQATTALSTSEA
Query: EYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYCSTDE
EY ATSSACQAVWLRR+ D +Q E T I+CDNKA A+TKNP +HGRTKH+DIR FIRDLV + +VL+YC+T+E
Subjt: EYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYCSTDE
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438CQE1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.9e-48 | 49.55 | Show/hide |
Query: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
MLNYKVVATP N NEKLQ EDGTE+ DAR F+SL+GGLIYL HTRPDI+F+V
Subjt: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
Query: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
GAV WSSKKQA TALS+SEAEY AATSSACQAVWLRR+ D +Q E T I+CDNKA A+TKNP +HGRTKH+DIR
Subjt: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
Query: FRFIRDLVAKDVIVLKYCSTDE
FIRDLV + +VL+YC+T+E
Subjt: FRFIRDLVAKDVIVLKYCSTDE
|
|
| A0A438CSS1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.3e-49 | 57.84 | Show/hide |
Query: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV---------------------------------GAVTWSSKKQATTAL
MLN KVVAT N NEKLQ EDGTE+ DAR FKSL+GGLIYL HTRPDI+F+V GAV WSSKKQA TAL
Subjt: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV---------------------------------GAVTWSSKKQATTAL
Query: STSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYCSTDE
S+SE EY ATSSACQAVWLRR+ D +Q E T I+CDNKA A+TKNP +HGRTKH+DIR FIRDLV + +VL+YC+T+E
Subjt: STSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYCSTDE
|
|
| A0A438G6H0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.4e-47 | 49.55 | Show/hide |
Query: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
MLN KVVATP N NEKLQ EDGTE+ DAR F+SL+GGLIYL HTRPDI+F+V
Subjt: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
Query: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
GAV WSSKKQA TALS+SEAEY AATSSACQAVWLRR+ D +Q E T I+CDNKA A+TKNPT+HGRTKH+DIR
Subjt: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
Query: FRFIRDLVAKDVIVLKYCSTDE
FIRDLV + +VL+YC+T+E
Subjt: FRFIRDLVAKDVIVLKYCSTDE
|
|
| A0A438G7R1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.9e-48 | 49.55 | Show/hide |
Query: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
MLNYKVVATP N NEKLQ EDGTE+ DAR F+SL+GGLIYL HTRPDI+F+V
Subjt: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSV------------------------------------------------
Query: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
GAV WSSKKQA TALS+SEAEY AATSSACQAVWLRR+ D +Q E T I+CDNKA A+TKNP +HGRTKH+DIR
Subjt: ----------------------GAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIR
Query: FRFIRDLVAKDVIVLKYCSTDE
FIRDLV + +VL+YC+T+E
Subjt: FRFIRDLVAKDVIVLKYCSTDE
|
|
| A0A438JYW8 Alpha-mannosidase | 9.9e-48 | 57.22 | Show/hide |
Query: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSVGAVT----------------------------WSSKKQATTALSTSEA
MLN KVVA P N NEKLQ EDGTE+ DAR F+SL+GGLIYL HTRPDI+F+VG ++ SKKQA TALS+SEA
Subjt: MLNYKVVATPTNMNEKLQLEDGTEKVDARSFKSLIGGLIYLGHTRPDISFSVGAVT----------------------------WSSKKQATTALSTSEA
Query: EYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYCSTDE
EY ATSSACQAVWLRR+ D +Q E T I+CDNKA A+TKNP +HGRTKH+DIR FIRDLV + +VL+YC+T+E
Subjt: EYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYCSTDE
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.9e-13 | 35.29 | Show/hide |
Query: FSVGAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYCS
F + W++K+Q + A S++EAEY+A + +A+WL+ L T + I+ DN+ ++ NP+ H R KHIDI++ F R+ V +VI L+Y
Subjt: FSVGAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYCS
Query: TD
T+
Subjt: TD
|
|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-17 | 40.38 | Show/hide |
Query: SFSVGAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYC
+FS GA++W SK Q ALST+EAEYIAAT + + +WL+R + + +E ++CD+++ ++KN +H RTKHID+R+ +IR++V + + +
Subjt: SFSVGAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKHIDIRFRFIRDLVAKDVIVLKYC
Query: STDE
ST+E
Subjt: STDE
|
|
| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.5e-11 | 31.75 | Show/hide |
Query: DARSFKSLIGGLIYLGHTRPDISFSVGAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKH
D + S G ++YLGH ++WSSKKQ S++EAEY + +++ + W+ L T+ I+CDN + NP FH R KH
Subjt: DARSFKSLIGGLIYLGHTRPDISFSVGAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKH
Query: IDIRFRFIRDLVAKDVIVLKYCSTDE
I I + FIR+ V + + + ST +
Subjt: IDIRFRFIRDLVAKDVIVLKYCSTDE
|
|
| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.9e-11 | 30.95 | Show/hide |
Query: DARSFKSLIGGLIYLGHTRPDISFSVGAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKH
D + S G ++YLGH ++WSSKKQ S++EAEY + +++ + W+ L T+ I+CDN + NP FH R KH
Subjt: DARSFKSLIGGLIYLGHTRPDISFSVGAVTWSSKKQATTALSTSEAEYIAATSSACQAVWLRRLHTDFHQVQHEETTIFCDNKATFAVTKNPTFHGRTKH
Query: IDIRFRFIRDLVAKDVIVLKYCSTDE
I + + FIR+ V + + + ST +
Subjt: IDIRFRFIRDLVAKDVIVLKYCSTDE
|
|
