; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr015882 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr015882
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionStructure-specific endonuclease subunit SLX1 homolog
Genome locationtig00006297:271908..273774
RNA-Seq ExpressionSgr015882
SyntenySgr015882
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0051569 - regulation of histone H3-K4 methylation (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016020 - membrane (cellular component)
GO:0016593 - Cdc73/Paf1 complex (cellular component)
GO:0033557 - Slx1-Slx4 complex (cellular component)
GO:0000993 - RNA polymerase II complex binding (molecular function)
GO:0008821 - crossover junction endodeoxyribonuclease activity (molecular function)
GO:0017108 - 5'-flap endonuclease activity (molecular function)
InterPro domainsIPR000305 - GIY-YIG endonuclease
IPR027520 - Structure-specific endonuclease subunit Slx1
IPR035901 - GIY-YIG endonuclease superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060004.1 Structure-specific endonuclease subunit SLX1 [Cucumis melo var. makuwa]4.1e-15074.1Show/hide
Query:  VVAEEEKE-DDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNES
        VV +EEKE DDE+EERGN  NGFFSCYLLAS CPRFKGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNES
Subjt:  VVAEEEKE-DDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNES

Query:  LAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDLEYNREYEEICSFR
        LAVRSAAATFKSLSGVANKVKLAYTMLTLPAW  LN+TVNYFSTK+ KN+AGCPSLPEHMKVQVSPI+ELPCYSEGDQGVLENEDD EY+RE EEICSF+
Subjt:  LAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDLEYNREYEEICSFR

Query:  AYGSTKEDVSNKIPQKLTDYQTGTNGVSHD-LRGCDKELKDDEREPP-SYTPTYI------------------------------VAGTSETEIIIEVDG
         YGS KE VSN++PQKL DYQTGT+G     LRGCDKEL+ +E+ PP S TP+Y+                              VAGTS TEIII+ DG
Subjt:  AYGSTKEDVSNKIPQKLTDYQTGTNGVSHD-LRGCDKELKDDEREPP-SYTPTYI------------------------------VAGTSETEIIIEVDG

Query:  EYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFIRL
        E    EGSG+ LQ+Q GRKNLTSGI +E SKVS  +NG  P    EYEVIDVSTPSPDCRTS HRFKRRVT    SE+IDLTKSP FI+L
Subjt:  EYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFIRL

XP_004153269.1 structure-specific endonuclease subunit SLX1 homolog [Cucumis sativus]5.5e-15573.63Show/hide
Query:  MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA
        MRKRKEKPEI K     +EEKEDDE+EERGNE NGFFSCYLLAS CPRFKGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSA
Subjt:  MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDL
        LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW  LN+TVNYFSTK+ KN+AGCPSLPEHMKVQVSPINELPCYSEGDQ +LENE D 
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDL

Query:  EYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTNG-VSHDLRGCDKELKDDEREPP-SYTPTY------------------------------IVA
        EYNRE EEIC FR YGS KE VSN++PQKL DYQTGT+G   H LRGCDKEL+ +E+ PP S TP+Y                              IVA
Subjt:  EYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTNG-VSHDLRGCDKELKDDEREPP-SYTPTY------------------------------IVA

Query:  GTSETEIIIEVDGEYE-EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFI
        GTS TEI+I+ + E + EGS + LQ+Q GR+NLTSGI +E SKVS  NNG+ P    EYEVIDVSTPSPDCRTS HRFKRRVT    SE+IDLTKSP FI
Subjt:  GTSETEIIIEVDGEYE-EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFI

Query:  RL
        +L
Subjt:  RL

XP_008457313.1 PREDICTED: uncharacterized protein LOC103497035 [Cucumis melo]2.1e-15474.14Show/hide
Query:  MRKRKEKPEISKPM--VVAEEEKE-DDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEI K M  VV +EEKE DDE+EERGN  NGFFSCYLLAS CPRFKGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEISKPM--VVAEEEKE-DDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW  LN+TVNYFSTK+ KN+AGCPSLPEHMKVQVSPI+ELPCYSEGDQGVLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE

Query:  DDLEYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTNGVSHD-LRGCDKELKDDEREPP-SYTPTYI-----------------------------
        DD EY+RE EEICSF+ YGS KE VSN++PQKL DYQTGT+G     LRGCDKEL+ +E+ PP S TP+Y+                             
Subjt:  DDLEYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTNGVSHD-LRGCDKELKDDEREPP-SYTPTYI-----------------------------

Query:  -VAGTSETEIIIEVDGEYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKS
         VAGTS TEIII+ DGE    EGSG+ LQ+Q GRKNLTSGI +E SKVS  +NG  P    EYEVIDVSTPSPDCRTS HRFKRRVT    SE+IDLTKS
Subjt:  -VAGTSETEIIIEVDGEYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKS

Query:  PMFIRL
        P FI+L
Subjt:  PMFIRL

XP_022154854.1 structure-specific endonuclease subunit SLX1 [Momordica charantia]2.7e-15475.52Show/hide
Query:  MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA
        MRKRKEK EISKPMVVAEEE   +EDEERGNE+NGFFSCYLLAS CPR+KGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA
Subjt:  MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDL
        LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW SLN+TVNYFSTKY  N+AGCPSLPEHMKVQVSPI++LPCYSEGDQGV ENEDDL
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDL

Query:  EYNREYEEICSFRAYGSTKEDVSNKIPQKLTD----------------YQTGTNGVSHDLRGCDKELKDDEREPPSYTPTYIVAGTSETEIIIEVDGEYE
        EYNREYEE+CSFR YGSTKE V N+IPQKLTD                      G+SHD+ G +KEL+D +R PPS  P+Y VAG SETEIIIE DGE +
Subjt:  EYNREYEEICSFRAYGSTKEDVSNKIPQKLTD----------------YQTGTNGVSHDLRGCDKELKDDEREPPSYTPTYIVAGTSETEIIIEVDGEYE

Query:  --EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPH-RFKRRVTCVVGSEIIDLTKSPMFIRL
          EG+G+ LQQ+ G        T   SKV   N G+PP    EYEVIDV TPSPDCRTS + RFKRR+T  VGSEIIDLTKSP FIRL
Subjt:  --EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPH-RFKRRVTCVVGSEIIDLTKSPMFIRL

XP_038894793.1 structure-specific endonuclease subunit SLX1 [Benincasa hispida]1.8e-15372.35Show/hide
Query:  MRKRKEKPEISKPMVVAEEEKEDDEDEER---GNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKE+PEISK M VAEEEKEDDEDEE     NE NGFFSCYLLAS CPR+KGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEISKPMVVAEEEKEDDEDEER---GNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW SLN+TVNYFSTKY KN+AGCPSLP+HMKVQVSPINELPCYSEGDQ VLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE

Query:  DDLEYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTN-------------------------------GVSHDLRGCDKELKDDEREPPSYTPTYI
        DD EYNRE EEICSFR YGS KE VSN++PQKL D+Q  T+                               G+S+DL GCD+EL++DEREP S  P+ I
Subjt:  DDLEYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTN-------------------------------GVSHDLRGCDKELKDDEREPPSYTPTYI

Query:  VAGTSETEIIIEVDGEYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSP
        V   S TEIII+ DG+ +  EG+G+ L+QQ  RKNL+SGI +E SKVS  N   PP    EYEVIDVSTPSPDCRT+ HR KR+VT    SEIIDLTKSP
Subjt:  VAGTSETEIIIEVDGEYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSP

Query:  MFIRL
         FI+L
Subjt:  MFIRL

TrEMBL top hitse value%identityAlignment
A0A0A0M0Y6 Structure-specific endonuclease subunit SLX1 homolog2.7e-15573.63Show/hide
Query:  MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA
        MRKRKEKPEI K     +EEKEDDE+EERGNE NGFFSCYLLAS CPRFKGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSA
Subjt:  MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDL
        LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW  LN+TVNYFSTK+ KN+AGCPSLPEHMKVQVSPINELPCYSEGDQ +LENE D 
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDL

Query:  EYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTNG-VSHDLRGCDKELKDDEREPP-SYTPTY------------------------------IVA
        EYNRE EEIC FR YGS KE VSN++PQKL DYQTGT+G   H LRGCDKEL+ +E+ PP S TP+Y                              IVA
Subjt:  EYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTNG-VSHDLRGCDKELKDDEREPP-SYTPTY------------------------------IVA

Query:  GTSETEIIIEVDGEYE-EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFI
        GTS TEI+I+ + E + EGS + LQ+Q GR+NLTSGI +E SKVS  NNG+ P    EYEVIDVSTPSPDCRTS HRFKRRVT    SE+IDLTKSP FI
Subjt:  GTSETEIIIEVDGEYE-EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFI

Query:  RL
        +L
Subjt:  RL

A0A1S3C574 Structure-specific endonuclease subunit SLX1 homolog1.0e-15474.14Show/hide
Query:  MRKRKEKPEISKPM--VVAEEEKE-DDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTN
        MRKRKEKPEI K M  VV +EEKE DDE+EERGN  NGFFSCYLLAS CPRFKGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTN
Subjt:  MRKRKEKPEISKPM--VVAEEEKE-DDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTN

Query:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE
        VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW  LN+TVNYFSTK+ KN+AGCPSLPEHMKVQVSPI+ELPCYSEGDQGVLENE
Subjt:  VSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENE

Query:  DDLEYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTNGVSHD-LRGCDKELKDDEREPP-SYTPTYI-----------------------------
        DD EY+RE EEICSF+ YGS KE VSN++PQKL DYQTGT+G     LRGCDKEL+ +E+ PP S TP+Y+                             
Subjt:  DDLEYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTNGVSHD-LRGCDKELKDDEREPP-SYTPTYI-----------------------------

Query:  -VAGTSETEIIIEVDGEYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKS
         VAGTS TEIII+ DGE    EGSG+ LQ+Q GRKNLTSGI +E SKVS  +NG  P    EYEVIDVSTPSPDCRTS HRFKRRVT    SE+IDLTKS
Subjt:  -VAGTSETEIIIEVDGEYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKS

Query:  PMFIRL
        P FI+L
Subjt:  PMFIRL

A0A5D3BBR0 Structure-specific endonuclease subunit SLX1 homolog2.0e-15074.1Show/hide
Query:  VVAEEEKE-DDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNES
        VV +EEKE DDE+EERGN  NGFFSCYLLAS CPRFKGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNES
Subjt:  VVAEEEKE-DDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNES

Query:  LAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDLEYNREYEEICSFR
        LAVRSAAATFKSLSGVANKVKLAYTMLTLPAW  LN+TVNYFSTK+ KN+AGCPSLPEHMKVQVSPI+ELPCYSEGDQGVLENEDD EY+RE EEICSF+
Subjt:  LAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDLEYNREYEEICSFR

Query:  AYGSTKEDVSNKIPQKLTDYQTGTNGVSHD-LRGCDKELKDDEREPP-SYTPTYI------------------------------VAGTSETEIIIEVDG
         YGS KE VSN++PQKL DYQTGT+G     LRGCDKEL+ +E+ PP S TP+Y+                              VAGTS TEIII+ DG
Subjt:  AYGSTKEDVSNKIPQKLTDYQTGTNGVSHD-LRGCDKELKDDEREPP-SYTPTYI------------------------------VAGTSETEIIIEVDG

Query:  EYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFIRL
        E    EGSG+ LQ+Q GRKNLTSGI +E SKVS  +NG  P    EYEVIDVSTPSPDCRTS HRFKRRVT    SE+IDLTKSP FI+L
Subjt:  EYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFIRL

A0A6J1DNH4 Structure-specific endonuclease subunit SLX1 homolog1.3e-15475.52Show/hide
Query:  MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA
        MRKRKEK EISKPMVVAEEE   +EDEERGNE+NGFFSCYLLAS CPR+KGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA
Subjt:  MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDL
        LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAW SLN+TVNYFSTKY  N+AGCPSLPEHMKVQVSPI++LPCYSEGDQGV ENEDDL
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDL

Query:  EYNREYEEICSFRAYGSTKEDVSNKIPQKLTD----------------YQTGTNGVSHDLRGCDKELKDDEREPPSYTPTYIVAGTSETEIIIEVDGEYE
        EYNREYEE+CSFR YGSTKE V N+IPQKLTD                      G+SHD+ G +KEL+D +R PPS  P+Y VAG SETEIIIE DGE +
Subjt:  EYNREYEEICSFRAYGSTKEDVSNKIPQKLTD----------------YQTGTNGVSHDLRGCDKELKDDEREPPSYTPTYIVAGTSETEIIIEVDGEYE

Query:  --EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPH-RFKRRVTCVVGSEIIDLTKSPMFIRL
          EG+G+ LQQ+ G        T   SKV   N G+PP    EYEVIDV TPSPDCRTS + RFKRR+T  VGSEIIDLTKSP FIRL
Subjt:  --EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPH-RFKRRVTCVVGSEIIDLTKSPMFIRL

A0A6J1HZQ2 Structure-specific endonuclease subunit SLX1 homolog2.6e-14271.43Show/hide
Query:  MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA
        MR+RKEKPEI K M VAEE+KEDDEDEERGNE NGFFSCYLLAS CPR+KGHTYIGFTVNPKRRIRQHNGEI CGAWRTKRKRPWEMV CIYGFPTNVSA
Subjt:  MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSA

Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDL
        LQFEWAWQHPNESLAVRSAAATFKSLSG+ANK+KLAYTMLTLPAW SLN+TVNYFSTKY  N+AGCPSLP HM+VQ+SPI+ELPCYSEGD+ VLENE+D 
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDL

Query:  EYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTNGVSHDLRGCDKELKDDEREP-PSYTPTYIVAGTSE----------------------TEIII
        EYN+EYEE+CS + +G   E V N+IPQ L DY TGT+G  H+LRG D+EL D+E+ P  S TP+YI  G S                       TEIII
Subjt:  EYNREYEEICSFRAYGSTKEDVSNKIPQKLTDYQTGTNGVSHDLRGCDKELKDDEREP-PSYTPTYIVAGTSE----------------------TEIII

Query:  EVDGEYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVV
        + DGE    EGSG+KLQQQ GRK   SGI TE SKVS    G PP    EYEVIDVSTPSP CRTS H+FKRR+  VV
Subjt:  EVDGEYE--EGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVV

SwissProt top hitse value%identityAlignment
A7STV9 Structure-specific endonuclease subunit SLX1 homolog2.7e-2742.28Show/hide
Query:  NGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIG-CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLS-GVAN
        +GF   YLL  V P+FKGHTYIG+TVNP RRI+QHNG +   GA++T RK+PW M+L ++GFP ++ ALQFEWAWQ P  S  ++SAA   K     V  
Subjt:  NGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIG-CGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLS-GVAN

Query:  KVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPI
          ++   +L +  W+ L + + +   +Y          P HM V   P+
Subjt:  KVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPI

Q0IH86 Structure-specific endonuclease subunit slx12.7e-2738.96Show/hide
Query:  EANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVA
        E  GF+  YLL    P++KG  YIGFTVNP+RRI+QHN G+   GAW+T  + PW+MVL ++GFP +++AL+FEWAWQHP+ S  +       K  S   
Subjt:  EANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVA

Query:  NKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELP
          + +   ML +  W+ L +T+ +   +YR+        P HM +    +   P
Subjt:  NKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELP

Q32PI0 Structure-specific endonuclease subunit SLX15.4e-2842.07Show/hide
Query:  FFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL  + PR +G  Y+GFTVNP RR++QHN G    GAWRT  + PWEMVL ++GFP+ V+AL+FEWAWQHP  S  +       +  +  A  ++
Subjt:  FFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSP
        +   ML  P W  L +T+ +    +R++   CP  P HM +   P
Subjt:  LAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSP

Q5PQP5 Structure-specific endonuclease subunit SLX18.3e-2940.74Show/hide
Query:  FFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR +G  Y+GFTVNP RR+RQHN G    GAWRT  + PW+MVL ++GFP+ V+AL+FEWAWQHP  S  +       +S +     ++
Subjt:  FFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSP------INELPCYSEGD
        +   ML +P W  L +TV +    +R     CP+ P HM +   P      + + P  SE D
Subjt:  LAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSP------INELPCYSEGD

Q8BX32 Structure-specific endonuclease subunit SLX12.9e-2941.36Show/hide
Query:  FFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK
        FF  YLL    PR +G  Y+GFTVNP RR+RQHN G    GAWRT  + PW+MVL I+GFP+ V+AL+FEWAWQHP  S  +       +S +  A  ++
Subjt:  FFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHN-GEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVK

Query:  LAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSP------INELPCYSEGD
        +   ML +P W  L +T+ +    +R     CP+ P HM +   P      + + P  SE D
Subjt:  LAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSP------INELPCYSEGD

Arabidopsis top hitse value%identityAlignment
AT2G30350.1 Excinuclease ABC, C subunit, N-terminal2.1e-3537.86Show/hide
Query:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSE-GDQGVLENEDD
        LQFEWAWQHP ES+AVR AAA FKS SGVA+K+KL YTML LPAW+SLN+TVNYFS+KY  +    PSLP HMKVQV  + +L  +++  D    E+E+ 
Subjt:  LQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSE-GDQGVLENEDD

Query:  LEYNREYEEICSFRAYGSTKEDVSN----------KIPQKLTDYQTGTNGVSHDLRGCDKELKDDEREPPSYTPTYIVAGTSETEIIIEVDGEYEEGSGL
         E N E ++     +   ++   SN          K  + +T +       +    G   E +  E E    T   I A   E E +           GL
Subjt:  LEYNREYEEICSFRAYGSTKEDVSN----------KIPQKLTDYQTGTNGVSHDLRGCDKELKDDEREPPSYTPTYIVAGTSETEIIIEVDGEYEEGSGL

Query:  K--LQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFI
           ++ +     + S    E       N+     +E + EVID+ TPSP CR      +RRV     SE IDLT SP FI
Subjt:  K--LQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFI

AT2G30350.2 Excinuclease ABC, C subunit, N-terminal2.3e-7446.35Show/hide
Query:  EDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFK
        ED   G +  GFF+CYLL S+ PR KG TYIGFTVNP+RRIRQHNGEI  GAWRTK+KRPWEMVLCIYGFPTNVSALQFEWAWQHP ES+AVR AAA FK
Subjt:  EDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFK

Query:  SLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSE-GDQGVLENEDDLEYNREYEEICSFRAYGSTKEDVS
        S SGVA+K+KL YTML LPAW+SLN+TVNYFS+KY  +    PSLP HMKVQV  + +L  +++  D    E+E+  E N E ++     +   ++   S
Subjt:  SLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSE-GDQGVLENEDDLEYNREYEEICSFRAYGSTKEDVS

Query:  N----------KIPQKLTDYQTGTNGVSHDLRGCDKELKDDEREPPSYTPTYIVAGTSETEIIIEVDGEYEEGSGLK--LQQQTGRKNLTSGITTESSKV
        N          K  + +T +       +    G   E +  E E    T   I A   E E +           GL   ++ +     + S    E    
Subjt:  N----------KIPQKLTDYQTGTNGVSHDLRGCDKELKDDEREPPSYTPTYIVAGTSETEIIIEVDGEYEEGSGLK--LQQQTGRKNLTSGITTESSKV

Query:  SSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFI
           N+     +E + EVID+ TPSP CR      +RRV     SE IDLT SP FI
Subjt:  SSHNNGFPPPSECEYEVIDVSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFI

AT5G43210.1 Excinuclease ABC, C subunit, N-terminal1.8e-0740.28Show/hide
Query:  FSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQ
        +S YL+ S     K  TY+G T +  RR++QHNGEI  GA  +   RPW     I GF     A  FE  W+
Subjt:  FSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGAAGAGGAAAGAGAAGCCAGAAATCTCTAAACCCATGGTTGTTGCAGAGGAGGAAAAGGAAGACGATGAAGATGAAGAAAGGGGCAACGAAGCAAATGGCTTCTT
TTCATGCTATCTGTTGGCCTCTGTCTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAACCCGAAACGTAGAATCAGGCAGCACAATGGTGAAATTGGAT
GCGGTGCATGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTATGCATTTATGGCTTCCCCACTAATGTCTCTGCTCTCCAGTTTGAATGGGCCTGGCAGCATCCT
AATGAATCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCCAACAAAGTTAAACTTGCATACACAATGCTCACCCTTCCAGCTTGGAGCAG
TTTAAATGTCACTGTAAACTACTTCTCAACAAAGTACAGGAAGAATTCTGCTGGTTGCCCAAGTTTGCCGGAGCATATGAAGGTGCAAGTTTCCCCCATCAATGAGCTTC
CATGCTATTCTGAAGGAGATCAAGGTGTGCTCGAAAATGAAGATGACTTGGAGTATAATAGAGAATATGAAGAAATTTGTAGTTTTCGAGCATATGGGTCGACAAAAGAA
GATGTTTCAAACAAAATTCCTCAAAAGTTAACGGATTACCAGACCGGTACAAATGGAGTATCTCATGACTTGCGTGGATGTGATAAAGAACTCAAAGATGATGAACGAGA
ACCACCTTCATATACTCCGACATATATTGTAGCGGGTACGTCTGAGACTGAAATCATCATTGAAGTAGATGGAGAATATGAAGAGGGGAGTGGTTTGAAGTTACAGCAGC
AAACTGGTAGGAAGAATTTAACCTCTGGAATAACTACTGAAAGCAGCAAAGTTTCAAGCCATAATAATGGGTTTCCTCCTCCTAGTGAGTGTGAGTATGAGGTTATAGAT
GTGTCTACCCCGTCTCCCGACTGCAGAACAAGTCCGCATAGATTCAAGAGAAGAGTTACTTGTGTTGTTGGGTCTGAGATTATTGACTTGACTAAATCTCCTATGTTTAT
CCGATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGAAGAGGAAAGAGAAGCCAGAAATCTCTAAACCCATGGTTGTTGCAGAGGAGGAAAAGGAAGACGATGAAGATGAAGAAAGGGGCAACGAAGCAAATGGCTTCTT
TTCATGCTATCTGTTGGCCTCTGTCTGCCCTCGTTTCAAAGGCCATACCTATATCGGATTCACAGTGAACCCGAAACGTAGAATCAGGCAGCACAATGGTGAAATTGGAT
GCGGTGCATGGCGTACTAAGAGGAAGAGACCTTGGGAGATGGTCTTATGCATTTATGGCTTCCCCACTAATGTCTCTGCTCTCCAGTTTGAATGGGCCTGGCAGCATCCT
AATGAATCATTGGCTGTAAGAAGTGCTGCTGCAACTTTCAAGTCTCTCTCTGGAGTTGCCAACAAAGTTAAACTTGCATACACAATGCTCACCCTTCCAGCTTGGAGCAG
TTTAAATGTCACTGTAAACTACTTCTCAACAAAGTACAGGAAGAATTCTGCTGGTTGCCCAAGTTTGCCGGAGCATATGAAGGTGCAAGTTTCCCCCATCAATGAGCTTC
CATGCTATTCTGAAGGAGATCAAGGTGTGCTCGAAAATGAAGATGACTTGGAGTATAATAGAGAATATGAAGAAATTTGTAGTTTTCGAGCATATGGGTCGACAAAAGAA
GATGTTTCAAACAAAATTCCTCAAAAGTTAACGGATTACCAGACCGGTACAAATGGAGTATCTCATGACTTGCGTGGATGTGATAAAGAACTCAAAGATGATGAACGAGA
ACCACCTTCATATACTCCGACATATATTGTAGCGGGTACGTCTGAGACTGAAATCATCATTGAAGTAGATGGAGAATATGAAGAGGGGAGTGGTTTGAAGTTACAGCAGC
AAACTGGTAGGAAGAATTTAACCTCTGGAATAACTACTGAAAGCAGCAAAGTTTCAAGCCATAATAATGGGTTTCCTCCTCCTAGTGAGTGTGAGTATGAGGTTATAGAT
GTGTCTACCCCGTCTCCCGACTGCAGAACAAGTCCGCATAGATTCAAGAGAAGAGTTACTTGTGTTGTTGGGTCTGAGATTATTGACTTGACTAAATCTCCTATGTTTAT
CCGATTGTAG
Protein sequenceShow/hide protein sequence
MRKRKEKPEISKPMVVAEEEKEDDEDEERGNEANGFFSCYLLASVCPRFKGHTYIGFTVNPKRRIRQHNGEIGCGAWRTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHP
NESLAVRSAAATFKSLSGVANKVKLAYTMLTLPAWSSLNVTVNYFSTKYRKNSAGCPSLPEHMKVQVSPINELPCYSEGDQGVLENEDDLEYNREYEEICSFRAYGSTKE
DVSNKIPQKLTDYQTGTNGVSHDLRGCDKELKDDEREPPSYTPTYIVAGTSETEIIIEVDGEYEEGSGLKLQQQTGRKNLTSGITTESSKVSSHNNGFPPPSECEYEVID
VSTPSPDCRTSPHRFKRRVTCVVGSEIIDLTKSPMFIRL