| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia] | 6.9e-146 | 75.91 | Show/hide |
Query: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
MSGK+K+LHNMSES SEQE V GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVF + L S+ T
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
Query: --------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
+NNPIGPKD DII+ARL GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLE++EDELAE
Subjt: --------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
Query: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFI
Subjt: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata] | 6.9e-146 | 75.91 | Show/hide |
Query: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
MSGK+K+LHNMSES SEQE V GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVF + L S+ T
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
Query: --------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
+NNPIGPKD DII+ARL GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLE++EDELAE
Subjt: --------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
Query: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFI
Subjt: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima] | 4.5e-145 | 75.91 | Show/hide |
Query: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
MSG++K+LH+MSES SEQE V GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVF------------------------
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVF
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVF------------------------
Query: -DSMLAVNVENLVLQLQSRHATRIS----------NNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
S + + V + + T S NNPIGPKD DII+ARL GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLEE+EDELAE
Subjt: -DSMLAVNVENLVLQLQSRHATRIS----------NNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
Query: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFI
Subjt: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo] | 1.2e-145 | 75.91 | Show/hide |
Query: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
MSGK+K+LHNMSES SE E V GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVF + L S+ T
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
Query: --------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
+NNPIGPKD DII+ARL GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLEE+EDELAE
Subjt: --------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
Query: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFI
Subjt: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida] | 4.2e-151 | 78.71 | Show/hide |
Query: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
MSGK+KSLHNMS+S+SEQEGV GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVID++EDDIE
Subjt: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGL+PIHVDPRLFEYSDKDTPNEKNTIVF L + S+ T
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
Query: --------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
SNNPIGPKD+DII+ARLGPGQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLEE++DELAE
Subjt: --------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
Query: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
ELKKKCPV+VFDIEDIA GKKRATVARPRACTLCRECIRG+ WEKRV+LRRVKDHFI
Subjt: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC1 | 6.3e-145 | 75.42 | Show/hide |
Query: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
MSGK+K+LHNMSES+SEQEGV GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGAFASMG DNSLRLD FRNNFKIEVID++EDDIE
Subjt: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
FDMIGIDPALANAFRRILI+EVPTMAIEKVL ANNTS+ QDEVLAHRLGL+PI VDPRLF+YSDKD PNE NTIVF L + S+ T
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
Query: ---------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELA
SNNPIGPKD+DII+ARLGPGQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVL+EE+EDELA
Subjt: ---------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELA
Query: EELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
EEL+KKCPV+VFDIEDIA GKKRATVARPR CTLCRECIRG+ WEKRV+LRRVKDHFI
Subjt: EELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC1 | 3.1e-144 | 78.03 | Show/hide |
Query: MSESQSEQEG--VGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALA
MS+S+SEQ GIEWIMNLPDVPMKLPPHLE+QRTRVECKADAPIHTDTIQYSGA+ASMGVDNSLRLDYFRNNFKIEVID+ EDDIEFDMIGIDPALA
Subjt: MSESQSEQEG--VGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALA
Query: NAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT--------------
NAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVF L + S+ T
Subjt: NAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT--------------
Query: ---------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVF
SNN IGPKDNDIIIARLGPGQEIELEAHA+KGMGKTHAKWSPVATAWY+MLPEVVL EE+EDELAEELKKKCPVDVF
Subjt: ---------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVF
Query: DIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
DIEDIANGKKRA VARPR+CTLCRECIRGE WEKRVSLRRVKDHFI
Subjt: DIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| A0A6J1DY99 DNA-directed RNA polymerases I and III subunit RPAC1 | 1.6e-140 | 74.44 | Show/hide |
Query: MSGKNKSLHNMSESQSEQ--EGVGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEF
MS K+K ++ S+ EQ GIEWIMNLPDVPMKLPPHLEL RTRVECKADAPIHTDTIQYSGA+ASMGVDNSL+LDYFRNNFKIEVID+ EDDIEF
Subjt: MSGKNKSLHNMSESQSEQ--EGVGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEF
Query: DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT----
DMIGIDPALANAFRR LIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGL+PIHVDPRLFEYSD+DTPNEKNTIVF L + S+ T
Subjt: DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT----
Query: -------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEE
S NPIGPKD+DIIIARL PGQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLEE+EDELAEE
Subjt: -------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEE
Query: LKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
LK KCPVDVFDIEDIANGKKRATV RPR+CTLCRECIRGE WEKRVSLRRVK+HFI
Subjt: LKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC1 | 3.4e-146 | 75.91 | Show/hide |
Query: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
MSGK+K+LHNMSES SEQE V GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVF + L S+ T
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSRHAT---
Query: --------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
+NNPIGPKD DII+ARL GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLE++EDELAE
Subjt: --------------------------------RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
Query: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFI
Subjt: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC1 | 2.2e-145 | 75.91 | Show/hide |
Query: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
MSG++K+LH+MSES SEQE V GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt: MSGKNKSLHNMSESQSEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
Query: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVF------------------------
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVF
Subjt: FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVF------------------------
Query: -DSMLAVNVENLVLQLQSRHATRIS----------NNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
S + + V + + T S NNPIGPKD DII+ARL GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLEE+EDELAE
Subjt: -DSMLAVNVENLVLQLQSRHATRIS----------NNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
Query: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFI
Subjt: ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15160 DNA-directed RNA polymerases I and III subunit RPAC1 | 2.5e-61 | 44.44 | Show/hide |
Query: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
+E R+RV + T + G ++ G D++ D F NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTS+ QDE
Subjt: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
Query: VLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSR-----HATRISNNP------------------------------IGPK
+LAHRLGLIPIH DPRLFEY ++ +E+ T ++ L +LQ R HA + S++P I P
Subjt: VLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSR-----HATRISNNP------------------------------IGPK
Query: DNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQ
+DI+IA+L PGQEI+L H +KG+GK HAK+SPVATA YR+LP++ LLE VE E AEEL + V +++++ GKK A VA PR T RE R E+
Subjt: DNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQ
Query: WEKRVSLRRVKDHFI
+K V L RV+DH+I
Subjt: WEKRVSLRRVKDHFI
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| O94616 DNA-directed RNA polymerases I and III subunit RPAC1 | 2.0e-55 | 38.96 | Show/hide |
Query: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
++ RT + +D ++ + G + DN LD F+ N K+ + + ++ + F++ GID ++ANAFRRILIAE+PT+A E V + NNTS+ QDE
Subjt: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
Query: VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFD------------------SMLAVNVE----NLVLQLQSRHATRISNNPIGPKDNDIIIA
VL+HR+GL+PI DP +F++ P ++ +T+VF L VN E +L+ + Q R R ++NPI + DI++A
Subjt: VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFD------------------SMLAVNVE----NLVLQLQSRHATRISNNPIGPKDNDIIIA
Query: RLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSL
+L PGQEI+LEAHAI G+G+ HAK+SPVATA YR+LP + +L +E E A + +K P V ++E+ +GKK+A VA R T+ REC+R ++ +V L
Subjt: RLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSL
Query: RRVKDHFI
RV+DH++
Subjt: RRVKDHFI
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| P52432 DNA-directed RNA polymerases I and III subunit RPAC1 | 1.0e-59 | 45.39 | Show/hide |
Query: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
+E RTRV + T + G +A G D++ + F NF+++V+ + ED +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTS+ QDE
Subjt: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
Query: VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFDSMLAV-------------NVENLVLQLQSRHATRI---------SNNPIGPKDNDIIIARLGP
+LAHRLGLIPI DPRLFEY + ++ E +T+ F + N + ++ +RH T + I P +DI+IA+L P
Subjt: VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFDSMLAV-------------NVENLVLQLQSRHATRI---------SNNPIGPKDNDIIIARLGP
Query: GQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVK
GQEI+L H +KG+GK HAK+SPVATA YR+LP + LLE VE E AEEL + V ++E++ GKK A VA R T RE R E+ +K V L RV+
Subjt: GQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVK
Query: DHFI
DH+I
Subjt: DHFI
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| Q32L22 DNA-directed RNA polymerases I and III subunit RPAC1 | 6.5e-62 | 44.76 | Show/hide |
Query: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
+E RTRV + T + G ++ G D++ D F NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTS+ QDE
Subjt: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
Query: VLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSR-----HATRISNNP------------------------------IGPK
+LAHRLGLIPIH DPRLFEY ++ ++ L +LQ R HA + S++P I P
Subjt: VLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFDSMLAVNVENLVLQLQSR-----HATRISNNP------------------------------IGPK
Query: DNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQ
+DI+IA+L PGQEI+L H +KG+GK HAK+SPVATA YR+LP++ LLE VE E AEEL + V ++++I GKK A VA PR T RE R E+
Subjt: DNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQ
Query: WEKRVSLRRVKDHFI
+K V L RV+DHFI
Subjt: WEKRVSLRRVKDHFI
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| Q54SN4 DNA-directed RNA polymerases I and III subunit rpac1 | 3.0e-59 | 42.67 | Show/hide |
Query: PHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQ
P+LE +RT+V + YSGA+ S+G DNS L+ F+ NFKI ++ +++ F+MIGID +ANA RRI+I+E+PTMAIEKV + NNTS+ Q
Subjt: PHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQ
Query: DEVLAHRLGLIPIHVDPRLF-------EYSDKDT-------PNEKNT----IVFDSMLAVNVENLVLQLQSRHATRISNNPIGPKDNDIIIARLGPGQEI
DEVLAHRLG+IPI VDPR F EY+ +DT EK++ I+ ++ L+ ++ + Q Q + P P ++DI I +L PGQ I
Subjt: DEVLAHRLGLIPIHVDPRLF-------EYSDKDT-------PNEKNT----IVFDSMLAVNVENLVLQLQSRHATRISNNPIGPKDNDIIIARLGPGQEI
Query: ELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
+++ + K +G+ H KWSPV TA YR+ P + + + ++ + A +L +KCP VFDIED + ARP CT+CRECIR ++E+ V + RV+DHFI
Subjt: ELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60620.1 RNA polymerase I subunit 43 | 9.1e-104 | 60.49 | Show/hide |
Query: IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIE
I +LPDVP LPPHLELQRTRV CK D+ IH I +SGA++SMGVDNS+RL+ F +FK++VI + E D+ FDMIG+ +ANAFRRIL+AE+P+MAIE
Subjt: IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIE
Query: KVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVF------------------DSMLAVNVENLVLQLQSRHAT------------
KV VANNTSV QDEVLAHRLGLIPI DPRLFEY S+ D PNEKNTIVF + N L+ + T
Subjt: KVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVF------------------DSMLAVNVENLVLQLQSRHAT------------
Query: ---RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPR
+ NPI P DI+IA+LGPGQEIELEAHA+KG+GKTHAKWSPVATAWYRMLPEVVLL+E E + AEEL K CP VFDIED+ G+KRATVARPR
Subjt: ---RISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPR
Query: ACTLCRECIR-GEQWEKRVSLRRVKDHFI
C+LCRECIR G +WE +V LRRVK+HFI
Subjt: ACTLCRECIR-GEQWEKRVSLRRVKDHFI
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| AT1G60850.1 DNA-directed RNA polymerase family protein | 9.5e-93 | 55.93 | Show/hide |
Query: IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
I +LPDVP LPPHL+ Q+TRV K +AP HT + YSG + +S D++++L F +NFK++V+ + + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt: IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
Query: EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVF------------------DSMLAVNVENLVLQLQSRHA------------
EKVL+A NTSV DEVLAHR+GLIPI DPRLFEY S+ D NEKNTIVF D N L+ + +++ +
Subjt: EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVF------------------DSMLAVNVENLVLQLQSRHA------------
Query: ---TRISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARP
+NNPI P D DI+IA+L PGQEIELEAHA+KG+GKTHAKWSPV TAWYRM PEVVL EVEDELAE L CP +VFDIED+ GKKRATVA+P
Subjt: ---TRISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARP
Query: RACTLCRECIRGEQWEKRVSLRRVKDHFI
R CTLC+EC+R + V L VK+HFI
Subjt: RACTLCRECIRGEQWEKRVSLRRVKDHFI
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| AT1G60850.2 DNA-directed RNA polymerase family protein | 9.5e-93 | 55.93 | Show/hide |
Query: IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
I +LPDVP LPPHL+ Q+TRV K +AP HT + YSG + +S D++++L F +NFK++V+ + + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt: IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
Query: EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVF------------------DSMLAVNVENLVLQLQSRHA------------
EKVL+A NTSV DEVLAHR+GLIPI DPRLFEY S+ D NEKNTIVF D N L+ + +++ +
Subjt: EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVF------------------DSMLAVNVENLVLQLQSRHA------------
Query: ---TRISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARP
+NNPI P D DI+IA+L PGQEIELEAHA+KG+GKTHAKWSPV TAWYRM PEVVL EVEDELAE L CP +VFDIED+ GKKRATVA+P
Subjt: ---TRISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARP
Query: RACTLCRECIRGEQWEKRVSLRRVKDHFI
R CTLC+EC+R + V L VK+HFI
Subjt: RACTLCRECIRGEQWEKRVSLRRVKDHFI
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| AT1G60850.3 DNA-directed RNA polymerase family protein | 1.4e-67 | 54.23 | Show/hide |
Query: IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
I +LPDVP LPPHL+ Q+TRV K +AP HT + YSG + +S D++++L F +NFK++V+ + + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt: IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
Query: EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVF------------------DSMLAVNVENLVLQLQSRHA------------
EKVL+A NTSV DEVLAHR+GLIPI DPRLFEY S+ D NEKNTIVF D N L+ + +++ +
Subjt: EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVF------------------DSMLAVNVENLVLQLQSRHA------------
Query: ---TRISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEV
+NNPI P D DI+IA+L PGQEIELEAHA+KG+GKTHAKWSPV TAWYRM PEV
Subjt: ---TRISNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEV
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| AT2G15430.1 DNA-directed RNA polymerase family protein | 2.9e-25 | 32.22 | Show/hide |
Query: KIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFD-SM
KI++ ++++D +F++ D ++ANA RR++I+EVPT+AI+ V + N+SV DE +AHRLGLIP+ + R + D D E ++ F S
Subjt: KIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFD-SM
Query: LAVNVENLVLQLQSRHATRISNNPI----------GPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELK-
V + L + + ++ + P+ + III +L GQE++L A A KG+GK HAKWSP AT + P++++ E++ D L++E K
Subjt: LAVNVENLVLQLQSRHATRISNNPI----------GPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELK-
Query: ---KKCPVDVFDIEDIANGKKRATVARPRACTLCRECIR
+ P VF ++ + ++ V P A T E I+
Subjt: ---KKCPVDVFDIEDIANGKKRATVARPRACTLCRECIR
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