CuGenDBv2

Gene ID	Sgr016421
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	40S ribosomal protein S13
Genome location	tig00152909:798583..799288
RNA-Seq Expression	Sgr016421
Synteny	Sgr016421
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005730 - nucleolus (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domains	IPR000589 - Ribosomal protein S15 IPR009068 - S15/NS1, RNA-binding IPR012606 - Ribosomal protein S13/S15, N-terminal IPR023029 - Ribosomal protein S15P

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAF3433118.1 hypothetical protein FNV43_RR24220 [Rhamnella rubrinervis]

1.7e-66

99.24

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AVSIRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

PON53778.1 Ribosomal protein [Parasponia andersonii]

1.7e-66

99.24

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AVSIRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

TKY55381.1 40S ribosomal protein S13 [Spatholobus suberectus]

3.8e-66

98.48

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGIS+SALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AVSIRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

XP_010053902.1 40S ribosomal protein S13 [Eucalyptus grandis]

1.7e-66

99.24

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AVSIRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

XP_031399048.1 40S ribosomal protein S13-like [Punica granatum]

2.9e-66

98.48

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILR+LKAHGLAPEIPEDLY+LIKTAVSIRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

TrEMBL top hits

e value

%identity

Alignment

A0A218X097 40S ribosomal protein S13

8.3e-67

99.24

Show/hide

Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AVSIRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

A0A2P5ADI8 Ribosomal protein

8.3e-67

99.24

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AVSIRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

A0A2P5BYA3 Ribosomal protein

8.3e-67

99.24

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AVSIRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

A0A2P5EV96 Ribosomal protein

8.3e-67

99.24

Show/hide

Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AVSIRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

A0A5B6YGH9 Putative Ribosomal protein S13A

8.3e-67

98.48

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKRTPPSWLKIS+QDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAV+IRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

SwissProt top hits

e value

%identity

Alignment

P46298 40S ribosomal protein S13

1.2e-65

94.7

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGIS+SALPY+RT PSWLKISSQDV+E ICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AVSIRKHLER RKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

P59223 40S ribosomal protein S13-1

1.3e-64

92.42

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKR+ PSWLK + QDV+E+ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AV+IRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

P59224 40S ribosomal protein S13-2

3.4e-65

93.18

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKR+ PSWLK +SQDV+E+ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AV+IRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

P62302 40S ribosomal protein S13

1.9e-68

97.73

Show/hide

Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGIS+SALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIK AVSIRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

Q69UI1 40S ribosomal protein S13-2

1.4e-58

85.61

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Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGIS+SALPYKRTPPSWLK ++ DVEE I K AKKG  PSQIGV+LRD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIK AV+IRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYK+TKKLPP WK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

Arabidopsis top hits

e value

%identity

Alignment

AT3G60770.1 Ribosomal protein S13/S15

9.1e-66

92.42

Show/hide

Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKR+ PSWLK + QDV+E+ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AV+IRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

AT4G00100.1 ribosomal protein S13A

2.4e-66

93.18

Show/hide

Query:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD
        KGISASALPYKR+ PSWLK +SQDV+E+ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIK AV+IRKHLERNRKD
Subjt:  KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKD

Query:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        KDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  KDSKFRLILVESRIHRLARYYKKTKKLPPVWK

Sequences

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CDS sequence

Show/hide CDS sequence

TAAGGGTATTTCTGCCTCAGCGCTGCCCTACAAGAGAACGCCTCCAAGTTGGCTGAAGATTTCTTCACAAGATGTGGAGGAGAACATTTGCAAATTTGCAAAGAAGGGTC
TTACACCGTCGCAAATTGGTGTTATTCTTCGTGATTCTCATGGTATAGCACAGGTTAAGAGCGTTACAGGAAGCAAGATATTGCGAATCCTCAAGGCTCACGGTCTTGCT
CCTGAAATTCCTGAGGATTTATACCACCTTATTAAGACAGCAGTGTCAATTAGGAAGCATTTGGAAAGAAACAGGAAGGATAAGGACTCCAAATTTCGTTTGATTCTGGT
TGAGAGCAGGATTCACAGGCTTGCTCGCTATTACAAGAAAACCAAGAAGCTTCCTCCCGTCTGGAAATAG

mRNA sequence

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Protein sequence

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KGISASALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKTAVSIRKHLERNRKDKDSKFRLILV
ESRIHRLARYYKKTKKLPPVWK

Sgr016421 (gene) of Monk fruit (Qingpiguo) v1 genome