| GenBank top hits | e value | %identity | Alignment |
|---|
| CAD1825827.1 unnamed protein product [Ananas comosus var. bracteatus] | 1.8e-55 | 57.87 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADENM---------------PDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQ----
++EC +TP+ KEKLQK DG EPADE + PD M+ VSVLSRF + S+ HMV AKRVLRYLKGTLS+GIK +V+ F+LQ
Subjt: MKECKSVNTPMILKEKLQKADGKEPADENM---------------PDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQ----
Query: --------------------ATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIKYYVLRDMQKEGEVLLVHCSSDEQIAD
ATAAVNQA WLKKL+ DLHL+QEE ++VFVDNQATL IS NPVFHG+TKHFKIKYY LR++QK GEV LV+CSS++QIAD
Subjt: --------------------ATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIKYYVLRDMQKEGEVLLVHCSSDEQIAD
Query: IFTKSFSVSRFQALRA
IFTKSF V RF+ LRA
Subjt: IFTKSFSVSRFQALRA
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| KYP62106.1 Copia protein [Cajanus cajan] | 3.8e-45 | 42.74 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFEL-----
M++CKS++TPM +KEK K DG E DE PDI+ V++LSRF HCAS+ H+ AA+RV+RY+KGT SFGIK K + F+L
Subjt: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFEL-----
Query: ---------------------------------------------QATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
AT AVNQA+WL+K++ DL+L+Q+E K+FVDNQA + IS NPVFHG+TKHF IK
Subjt: ---------------------------------------------QATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
Query: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
+ LR++Q++G V LV+C ++EQI DIFTKS S+F+ LR
Subjt: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
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| RVX01687.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 8.5e-45 | 44.4 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADENM---------------PDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFE------
M+ECKS +TPM KEK K DG E DE + PDIM+ VS+LSR+ HCAS+ H AAKRV+RY+KGT+ +GIK S+V+SF
Subjt: MKECKSVNTPMILKEKLQKADGKEPADENM---------------PDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFE------
Query: --------------------------------------------LQATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
+ A AAVNQA+WL+KL+ DL +KQE S KVFVDNQAT+ I+ +PVFHG+TKHFKIK
Subjt: --------------------------------------------LQATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
Query: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
Y LR++QKEG++ LV+C+++ Q ADI TK+ RF+ LR
Subjt: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
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| XP_003613757.4 uncharacterized protein LOC11413243 [Medicago truncatula] | 1.1e-44 | 43.57 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFEL-----
M++CKSV+TPM KEKL K D E DE PDI+ VS+LSRF HCAS+ H+ AAKRV+RY+KGT++FGIK K + ++L
Subjt: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFEL-----
Query: ---------------------------------------------QATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
ATAAVNQA+WL+K++ DLHL+Q+E K+FVDNQA + IS NPVFHG+TKHF IK
Subjt: ---------------------------------------------QATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
Query: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
+ +R++QK+ V LV+C ++EQIADIFTK S+F+ LR
Subjt: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
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| XP_031377996.1 uncharacterized protein LOC116193313 [Punica granatum] | 7.0e-47 | 44.4 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQ----
M+ECKSV+TPM K K+QK DG P DE MPDIM+ V+VLSRF CAS+ HMVAAKRV+RYLKGT S+G+K + +F+L
Subjt: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQ----
Query: ----------------------------------------------ATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
ATAA NQA+WL+KL+ DL + + ++FVDNQA L IS NPVFHG+TKHFK+K
Subjt: ----------------------------------------------ATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
Query: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
+Y LR++Q+ GE+ LV+C +++Q+AD+FTKSF V RF+ LR
Subjt: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151RJK0 Copia protein | 7.1e-45 | 41.91 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFEL-----
M++CKS++TPM +KEK K DG E DE PDI+ V++LSRF HCAS+ H+ AA+RV+RY+KGT SFGIK K + F+L
Subjt: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFEL-----
Query: ---------------------------------------------QATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
AT A+NQA+WL+K++ DL+L+Q+E ++FVDNQA + IS NPVFHG+TKHF IK
Subjt: ---------------------------------------------QATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
Query: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
+ LR++Q++G V LV+C ++EQIA+IFTKS S+F+ LR
Subjt: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
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| A0A151T4Y8 Copia protein | 1.9e-45 | 42.74 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFEL-----
M++CKS++TPM +KEK K DG E DE PDI+ V++LSRF HCAS+ H+ AA+RV+RY+KGT SFGIK K + F+L
Subjt: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFEL-----
Query: ---------------------------------------------QATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
AT AVNQA+WL+K++ DL+L+Q+E K+FVDNQA + IS NPVFHG+TKHF IK
Subjt: ---------------------------------------------QATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
Query: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
+ LR++Q++G V LV+C ++EQI DIFTKS S+F+ LR
Subjt: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
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| A0A438IYC9 Retrovirus-related Pol polyprotein from transposon RE1 | 4.1e-45 | 44.4 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADENM---------------PDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFE------
M+ECKS +TPM KEK K DG E DE + PDIM+ VS+LSR+ HCAS+ H AAKRV+RY+KGT+ +GIK S+V+SF
Subjt: MKECKSVNTPMILKEKLQKADGKEPADENM---------------PDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFE------
Query: --------------------------------------------LQATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
+ A AAVNQA+WL+KL+ DL +KQE S KVFVDNQAT+ I+ +PVFHG+TKHFKIK
Subjt: --------------------------------------------LQATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
Query: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
Y LR++QKEG++ LV+C+++ Q ADI TK+ RF+ LR
Subjt: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
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| A0A6P8C8B8 uncharacterized protein LOC116193313 | 3.4e-47 | 44.4 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQ----
M+ECKSV+TPM K K+QK DG P DE MPDIM+ V+VLSRF CAS+ HMVAAKRV+RYLKGT S+G+K + +F+L
Subjt: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQ----
Query: ----------------------------------------------ATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
ATAA NQA+WL+KL+ DL + + ++FVDNQA L IS NPVFHG+TKHFK+K
Subjt: ----------------------------------------------ATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
Query: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
+Y LR++Q+ GE+ LV+C +++Q+AD+FTKSF V RF+ LR
Subjt: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
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| A0A6V7P4U8 Uncharacterized protein | 8.9e-56 | 57.87 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADENM---------------PDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQ----
++EC +TP+ KEKLQK DG EPADE + PD M+ VSVLSRF + S+ HMV AKRVLRYLKGTLS+GIK +V+ F+LQ
Subjt: MKECKSVNTPMILKEKLQKADGKEPADENM---------------PDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQ----
Query: --------------------ATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIKYYVLRDMQKEGEVLLVHCSSDEQIAD
ATAAVNQA WLKKL+ DLHL+QEE ++VFVDNQATL IS NPVFHG+TKHFKIKYY LR++QK GEV LV+CSS++QIAD
Subjt: --------------------ATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIKYYVLRDMQKEGEVLLVHCSSDEQIAD
Query: IFTKSFSVSRFQALRA
IFTKSF V RF+ LRA
Subjt: IFTKSFSVSRFQALRA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.3e-16 | 25.41 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFE------
M+ C +V+TP+ K + + E + PD+ V++LSR+ + KRVLRYLKGT+ + K +FE
Subjt: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFE------
Query: -----------------------------------------------LQATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHF
+ AV +A+WLK L+ +++K E +K++ DNQ + I+ NP H R KH
Subjt: -----------------------------------------------LQATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHF
Query: KIKYYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
IKY+ R+ + + L + ++ Q+ADIFTK +RF LR
Subjt: KIKYYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQALR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.5e-15 | 27.05 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADE--NM--------------------PDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGT----LSFG-----
MK K V+TP+ KL K +E NM PDI + V V+SRF K H A K +LRYL+GT L FG
Subjt: MKECKSVNTPMILKEKLQKADGKEPADE--NM--------------------PDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGT----LSFG-----
Query: ----------------------------------------IKLSKVESFELQATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRT
+ LS E+ + AT + +WLK+ + +L L Q+E V V+ D+Q+ + +S N ++H RT
Subjt: ----------------------------------------IKLSKVESFELQATAAVNQAVWLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRT
Query: KHFKIKYYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQ
KH ++Y+ +R+M + + ++ S++E AD+ TK ++F+
Subjt: KHFKIKYYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQ
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.7e-16 | 27.73 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQA---
M K V TPM KL G + D PDI Y V+ LS+F H ++ H+ A KR+LRYL GT + GI L K + L A
Subjt: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQA---
Query: ---------------------------------------TAAVNQAV--------WLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
T A ++V W+ L+ +L ++ ++ DN + NPVFH R KH I
Subjt: ---------------------------------------TAAVNQAV--------WLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
Query: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQ
Y+ +R+ + G + +VH S+ +Q+AD TK S + FQ
Subjt: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-14 | 26.89 | Show/hide |
Query: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQA---
M K V TPM KL G + D PD+ Y V+ LS++ H + +H A KRVLRYL GT GI L K + L A
Subjt: MKECKSVNTPMILKEKLQKADGKEPADE---------------NMPDIMYTVSVLSRFCHCASKNHMVAAKRVLRYLKGTLSFGIKLSKVESFELQA---
Query: ---------------------------------------TAAVNQAV--------WLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
T A ++V W+ L+ +L ++ ++ DN + NPVFH R KH +
Subjt: ---------------------------------------TAAVNQAV--------WLKKLIHDLHLKQEESVKVFVDNQATLGISLNPVFHGRTKHFKIK
Query: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQ
Y+ +R+ + G + +VH S+ +Q+AD TK S FQ
Subjt: YYVLRDMQKEGEVLLVHCSSDEQIADIFTKSFSVSRFQ
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